RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 EDAQ92838 391 aa20.6■□□□□ 0.89
CLK1-211ENST00000481641 ZFP42Q96MM3 310 aa20.6■□□□□ 0.89
CLK1-211ENST00000481641 TUFT1Q9NNX1 390 aa20.6■□□□□ 0.89
CLK1-211ENST00000481641 KANSL3Q9P2N6 904 aa20.6■□□□□ 0.89
CLK1-211ENST00000481641 PRG3Q9Y2Y8 225 aaPredicted RBP20.6■□□□□ 0.89
CLK1-211ENST00000481641 ARL5CA6NH57 179 aa20.59■□□□□ 0.89
CLK1-211ENST00000481641 LRRIQ4A6NIV6 560 aa20.59■□□□□ 0.89
CLK1-211ENST00000481641 SCNN1GP51170 649 aa20.59■□□□□ 0.89
CLK1-211ENST00000481641 NCBP1Q09161 790 aaKnown RBP20.59■□□□□ 0.89
CLK1-211ENST00000481641 GNL2Q13823 731 aaKnown RBP20.59■□□□□ 0.89
CLK1-211ENST00000481641 PTPN14Q15678 1187 aa20.59■□□□□ 0.89
CLK1-211ENST00000481641 TPRNQ4KMQ1 711 aa20.59■□□□□ 0.89
CLK1-211ENST00000481641 RARS2Q5T160 578 aaKnown RBP20.59■□□□□ 0.89
CLK1-211ENST00000481641 CNNM3Q8NE01 707 aa20.59■□□□□ 0.89
CLK1-211ENST00000481641 SLC22A17Q8WUG5 538 aa20.59■□□□□ 0.89
CLK1-211ENST00000481641 TMEM175Q9BSA9 504 aa20.59■□□□□ 0.89
CLK1-211ENST00000481641 POLR3CQ9BUI4 534 aaPredicted RBP20.59■□□□□ 0.89
CLK1-211ENST00000481641 NXF3Q9H4D5 531 aaKnown RBP20.59■□□□□ 0.89
CLK1-211ENST00000481641 POLD4Q9HCU8 107 aa20.59■□□□□ 0.89
CLK1-211ENST00000481641 IRAK3Q9Y616 596 aa20.59■□□□□ 0.89
CLK1-211ENST00000481641 CARNS1A5YM72 827 aa20.58■□□□□ 0.89
CLK1-211ENST00000481641 F8W810 466 aa20.58■□□□□ 0.89
CLK1-211ENST00000481641 NPTXRO95502 500 aa20.58■□□□□ 0.89
CLK1-211ENST00000481641 AKAP5P24588 427 aa20.58■□□□□ 0.89
CLK1-211ENST00000481641 OR1G1P47890 313 aa20.58■□□□□ 0.89
CLK1-211ENST00000481641 RBM25P49756 843 aaKnown RBP20.58■□□□□ 0.89
CLK1-211ENST00000481641 HMGN5P82970 282 aaKnown RBP20.58■□□□□ 0.89
CLK1-211ENST00000481641 ZXDAP98168 799 aa20.58■□□□□ 0.89
CLK1-211ENST00000481641 PCBP1Q15365 356 aaKnown RBP eCLIP20.58■□□□□ 0.89
CLK1-211ENST00000481641 ECM1Q16610 540 aa20.58■□□□□ 0.89
CLK1-211ENST00000481641 TAS1R1Q7RTX1 841 aa20.58■□□□□ 0.89
CLK1-211ENST00000481641 NOSTRINQ8IVI9 506 aa20.58■□□□□ 0.89
CLK1-211ENST00000481641 COLGALT2Q8IYK4 626 aa20.58■□□□□ 0.89
CLK1-211ENST00000481641 C4orf32Q8N8J7 132 aa20.58■□□□□ 0.89
CLK1-211ENST00000481641 BSNDQ8WZ55 320 aa20.58■□□□□ 0.89
CLK1-211ENST00000481641 CCDC51Q96ER9 411 aa20.58■□□□□ 0.89
CLK1-211ENST00000481641 NACC1Q96RE7 527 aa20.58■□□□□ 0.89
CLK1-211ENST00000481641 NFKBIZQ9BYH8 718 aa20.58■□□□□ 0.89
CLK1-211ENST00000481641 TRIM6Q9C030 488 aaPredicted RBP20.58■□□□□ 0.89
CLK1-211ENST00000481641 ADAM7Q9H2U9 754 aa20.58■□□□□ 0.89
CLK1-211ENST00000481641 POMKQ9H5K3 350 aa20.58■□□□□ 0.89
CLK1-211ENST00000481641 UBN1Q9NPG3 1134 aa20.58■□□□□ 0.89
CLK1-211ENST00000481641 TSHZ2Q9NRE2 1034 aa20.58■□□□□ 0.89
CLK1-211ENST00000481641 SH2B1Q9NRF2 756 aaPredicted RBP20.58■□□□□ 0.89
CLK1-211ENST00000481641 MARCH5Q9NX47 278 aa20.58■□□□□ 0.89
CLK1-211ENST00000481641 DBR1Q9UK59 544 aaKnown RBP20.58■□□□□ 0.89
CLK1-211ENST00000481641 MUC6Q6W4X9 2439 aa20.57■□□□□ 0.88
CLK1-211ENST00000481641 TTLL13PA6NNM8 815 aa20.57■□□□□ 0.88
CLK1-211ENST00000481641 RPA1P27694 616 aa20.57■□□□□ 0.88
CLK1-211ENST00000481641 CES5AQ6NT32 575 aa20.57■□□□□ 0.88
CLK1-211ENST00000481641 KLHL5Q96PQ7 755 aa20.57■□□□□ 0.88
CLK1-211ENST00000481641 KLK14Q9P0G3 267 aa20.57■□□□□ 0.88
CLK1-211ENST00000481641 USP20Q9Y2K6 914 aa20.57■□□□□ 0.88
CLK1-211ENST00000481641 ARIH1Q9Y4X5 557 aaPredicted RBP20.57■□□□□ 0.88
CLK1-211ENST00000481641 TDRD15B5MCY1 1934 aaKnown RBP20.57■□□□□ 0.88
CLK1-211ENST00000481641 C2CD2LO14523 706 aa20.56■□□□□ 0.88
CLK1-211ENST00000481641 INPPL1O15357 1258 aa20.56■□□□□ 0.88
CLK1-211ENST00000481641 LILRB3O75022 631 aa20.56■□□□□ 0.88
CLK1-211ENST00000481641 CNPP09543 421 aaKnown RBP20.56■□□□□ 0.88
CLK1-211ENST00000481641 ITIH3Q06033 890 aa20.56■□□□□ 0.88
CLK1-211ENST00000481641 GIT2Q14161 759 aa20.56■□□□□ 0.88
CLK1-211ENST00000481641 PADI6Q6TGC4 694 aa20.56■□□□□ 0.88
CLK1-211ENST00000481641 TRIM67Q6ZTA4 783 aa20.56■□□□□ 0.88
CLK1-211ENST00000481641 MCPH1Q8NEM0 835 aa20.56■□□□□ 0.88
CLK1-211ENST00000481641 ERMNQ8TAM6 284 aa20.56■□□□□ 0.88
CLK1-211ENST00000481641 A0A1B0GUA9 196 aa20.55■□□□□ 0.88
CLK1-211ENST00000481641 ARHGEF35A5YM69 484 aa20.55■□□□□ 0.88
CLK1-211ENST00000481641 TMEM221A6NGB7 291 aa20.55■□□□□ 0.88
CLK1-211ENST00000481641 M0R296 226 aa20.55■□□□□ 0.88
CLK1-211ENST00000481641 KLRC2P26717 231 aa20.55■□□□□ 0.88
CLK1-211ENST00000481641 TOB1P50616 345 aaPredicted RBP20.55■□□□□ 0.88
CLK1-211ENST00000481641 DSC1Q08554 894 aa20.55■□□□□ 0.88
CLK1-211ENST00000481641 ORC2Q13416 577 aaPredicted RBP20.55■□□□□ 0.88
CLK1-211ENST00000481641 SLC27A1Q6PCB7 646 aa20.55■□□□□ 0.88
CLK1-211ENST00000481641 GSTCDQ8NEC7 633 aa20.55■□□□□ 0.88
CLK1-211ENST00000481641 RABGGTAQ92696 567 aa20.55■□□□□ 0.88
CLK1-211ENST00000481641 PARP2Q9UGN5 583 aa20.55■□□□□ 0.88
CLK1-211ENST00000481641 GIT1Q9Y2X7 761 aa20.55■□□□□ 0.88
CLK1-211ENST00000481641 MYO10Q9HD67 2058 aa20.55■□□□□ 0.88
CLK1-211ENST00000481641 ZNF318Q5VUA4 2279 aa20.54■□□□□ 0.88
CLK1-211ENST00000481641 C2CD4DB7Z1M9 353 aa20.54■□□□□ 0.88
CLK1-211ENST00000481641 SOD2P04179 222 aa20.54■□□□□ 0.88
CLK1-211ENST00000481641 EDN1P05305 212 aa20.54■□□□□ 0.88
CLK1-211ENST00000481641 LIG1P18858 919 aa20.54■□□□□ 0.88
CLK1-211ENST00000481641 CYP11B2P19099 503 aa20.54■□□□□ 0.88
CLK1-211ENST00000481641 CCT6AP40227 531 aaKnown RBP20.54■□□□□ 0.88
CLK1-211ENST00000481641 CDCA2Q69YH5 1023 aaPredicted RBP20.54■□□□□ 0.88
CLK1-211ENST00000481641 TMC5Q6UXY8 1006 aa20.54■□□□□ 0.88
CLK1-211ENST00000481641 CABP7Q86V35 215 aa20.54■□□□□ 0.88
CLK1-211ENST00000481641 HERC2P3Q9BVR0 1158 aa20.54■□□□□ 0.88
CLK1-211ENST00000481641 EMILIN2Q9BXX0 1053 aa20.54■□□□□ 0.88
CLK1-211ENST00000481641 FZD8Q9H461 694 aa20.54■□□□□ 0.88
CLK1-211ENST00000481641 MRPL17Q9NRX2 175 aaKnown RBP20.54■□□□□ 0.88
CLK1-211ENST00000481641 PRMT7Q9NVM4 692 aaPredicted RBP20.54■□□□□ 0.88
CLK1-211ENST00000481641 DZANK1Q9NVP4 752 aa20.54■□□□□ 0.88
CLK1-211ENST00000481641 CACNG4Q9UBN1 327 aa20.54■□□□□ 0.88
CLK1-211ENST00000481641 NOL7Q9UMY1 257 aaKnown RBP20.54■□□□□ 0.88
CLK1-211ENST00000481641 PCDHB6Q9Y5E3 794 aa20.54■□□□□ 0.88
CLK1-211ENST00000481641 MYBP10242 640 aa20.53■□□□□ 0.88
CLK1-211ENST00000481641 U2AF2P26368 475 aaKnown RBP eCLIP20.53■□□□□ 0.888e-9■■■□□ 17.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms