RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	RTF1	Q92541	710 aa	Known RBP	4.79	□□□□□ -1.64
CCNL1-223	ENST00000481173	CAVIN3	Q969G5	261 aa		4.79	□□□□□ -1.64
CCNL1-223	ENST00000481173	PDCD2L	Q9BRP1	358 aa		4.79	□□□□□ -1.64
CCNL1-223	ENST00000481173	OSBPL6	Q9BZF3	934 aa		4.79	□□□□□ -1.64
CCNL1-223	ENST00000481173	TOMM22	Q9NS69	142 aa		4.79	□□□□□ -1.64
CCNL1-223	ENST00000481173	OXSM	Q9NWU1	459 aa		4.79	□□□□□ -1.64
CCNL1-223	ENST00000481173	SYBU	Q9NX95	663 aa		4.79	□□□□□ -1.64
CCNL1-223	ENST00000481173	HDAC5	Q9UQL6	1122 aa		4.79	□□□□□ -1.64
CCNL1-223	ENST00000481173	EPN1	Q9Y6I3	576 aa	Predicted RBP	4.79	□□□□□ -1.64
CCNL1-223	ENST00000481173	ZNF891	A8MT65	544 aa	Predicted RBP	4.78	□□□□□ -1.64
CCNL1-223	ENST00000481173	INO80B-WBP1	J3KQ70	363 aa		4.78	□□□□□ -1.64
CCNL1-223	ENST00000481173	RNASET2	O00584	256 aa	Known RBP	4.78	□□□□□ -1.64
CCNL1-223	ENST00000481173	ERBB2	P04626	1255 aa		4.78	□□□□□ -1.64
CCNL1-223	ENST00000481173	CDK4	P11802	303 aa		4.78	□□□□□ -1.64
CCNL1-223	ENST00000481173	AVPR1B	P47901	424 aa		4.78	□□□□□ -1.64
CCNL1-223	ENST00000481173	RNASE9	P60153	205 aa	Known RBP	4.78	□□□□□ -1.64
CCNL1-223	ENST00000481173	CD69	Q07108	199 aa		4.78	□□□□□ -1.64
CCNL1-223	ENST00000481173	FOXI1	Q12951	378 aa		4.78	□□□□□ -1.64
CCNL1-223	ENST00000481173	METTL24	Q5JXM2	366 aa		4.78	□□□□□ -1.64
CCNL1-223	ENST00000481173	CREB3L3	Q68CJ9	461 aa		4.78	□□□□□ -1.64
CCNL1-223	ENST00000481173	SP5	Q6BEB4	398 aa	Predicted RBP	4.78	□□□□□ -1.64
CCNL1-223	ENST00000481173	IQSEC1	Q6DN90	963 aa		4.78	□□□□□ -1.64
CCNL1-223	ENST00000481173	KIAA1841	Q6NSI8	718 aa		4.78	□□□□□ -1.64
CCNL1-223	ENST00000481173	TIGD7	Q6NT04	549 aa	Predicted RBP	4.78	□□□□□ -1.64
CCNL1-223	ENST00000481173	PHYKPL	Q8IUZ5	450 aa		4.78	□□□□□ -1.64
CCNL1-223	ENST00000481173	IL17RA	Q96F46	866 aa		4.78	□□□□□ -1.64
CCNL1-223	ENST00000481173	INO80B	Q9C086	356 aa	Predicted RBP	4.78	□□□□□ -1.64
CCNL1-223	ENST00000481173	MTFR1L	Q9H019	292 aa		4.78	□□□□□ -1.64
CCNL1-223	ENST00000481173	INTS7	Q9NVH2	962 aa	Known RBP	4.78	□□□□□ -1.64
CCNL1-223	ENST00000481173	FANCL	Q9NW38	375 aa		4.78	□□□□□ -1.64
CCNL1-223	ENST00000481173	IFT57	Q9NWB7	429 aa		4.78	□□□□□ -1.64
CCNL1-223	ENST00000481173	MAGEC2	Q9UBF1	373 aa	Predicted RBP	4.78	□□□□□ -1.64
CCNL1-223	ENST00000481173	ZKSCAN5	Q9Y2L8	839 aa		4.78	□□□□□ -1.64
CCNL1-223	ENST00000481173	CHST2	Q9Y4C5	530 aa		4.78	□□□□□ -1.64
CCNL1-223	ENST00000481173	INSL6	Q9Y581	213 aa		4.78	□□□□□ -1.64
CCNL1-223	ENST00000481173	FAM83G	A6ND36	823 aa		4.77	□□□□□ -1.65
CCNL1-223	ENST00000481173	MAFG	O15525	162 aa		4.77	□□□□□ -1.65
CCNL1-223	ENST00000481173	PCDH8	O95206	1070 aa		4.77	□□□□□ -1.65
CCNL1-223	ENST00000481173	SEC24C	P53992	1094 aa		4.77	□□□□□ -1.65
CCNL1-223	ENST00000481173	MRPL49	Q13405	166 aa	Known RBP	4.77	□□□□□ -1.65
CCNL1-223	ENST00000481173	PCBP1	Q15365	356 aa	Known RBP eCLIP	4.77	□□□□□ -1.65
CCNL1-223	ENST00000481173	TCEA2	Q15560	299 aa		4.77	□□□□□ -1.65
CCNL1-223	ENST00000481173	BEAN1	Q3B7T3	259 aa		4.77	□□□□□ -1.65
CCNL1-223	ENST00000481173	PAPD7	Q5XG87	772 aa	Known RBP	4.77	□□□□□ -1.65
CCNL1-223	ENST00000481173	HOMER1	Q86YM7	354 aa		4.77	□□□□□ -1.65
CCNL1-223	ENST00000481173	DHX37	Q8IY37	1157 aa	Known RBP	4.77	□□□□□ -1.65
CCNL1-223	ENST00000481173	UNC5B	Q8IZJ1	945 aa		4.77	□□□□□ -1.65
CCNL1-223	ENST00000481173	CPEB3	Q8NE35	698 aa	Known RBP	4.77	□□□□□ -1.65
CCNL1-223	ENST00000481173	CHTF18	Q8WVB6	975 aa		4.77	□□□□□ -1.65
CCNL1-223	ENST00000481173	LINC00476	Q8WZB0	136 aa		4.77	□□□□□ -1.65
CCNL1-223	ENST00000481173	HIST1H2AH	Q96KK5	128 aa		4.77	□□□□□ -1.65
CCNL1-223	ENST00000481173	DCLRE1C	Q96SD1	692 aa	Known RBP	4.77	□□□□□ -1.65
CCNL1-223	ENST00000481173	HIST1H2AJ	Q99878	128 aa		4.77	□□□□□ -1.65
CCNL1-223	ENST00000481173	SPON1	Q9HCB6	807 aa		4.77	□□□□□ -1.65
CCNL1-223	ENST00000481173	THG1L	Q9NWX6	298 aa	Known RBP	4.77	□□□□□ -1.65
CCNL1-223	ENST00000481173	SPO11	Q9Y5K1	396 aa		4.77	□□□□□ -1.65
CCNL1-223	ENST00000481173	ZNF185	O15231	689 aa		4.76	□□□□□ -1.65
CCNL1-223	ENST00000481173	LY86	O95711	162 aa		4.76	□□□□□ -1.65
CCNL1-223	ENST00000481173	F2	P00734	622 aa		4.76	□□□□□ -1.65
CCNL1-223	ENST00000481173	CXCR5	P32302	372 aa		4.76	□□□□□ -1.65
CCNL1-223	ENST00000481173	NHLH2	Q02577	135 aa		4.76	□□□□□ -1.65
CCNL1-223	ENST00000481173	ADCY1	Q08828	1119 aa		4.76	□□□□□ -1.65
CCNL1-223	ENST00000481173	PRR16	Q569H4	304 aa		4.76	□□□□□ -1.65
CCNL1-223	ENST00000481173	LRRTM3	Q86VH5	581 aa		4.76	□□□□□ -1.65
CCNL1-223	ENST00000481173	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	4.76	□□□□□ -1.65
CCNL1-223	ENST00000481173	TES	Q9UGI8	421 aa	Known RBP	4.76	□□□□□ -1.65
CCNL1-223	ENST00000481173	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.75	□□□□□ -1.65
CCNL1-223	ENST00000481173	PRR5-ARHGAP8	B1AHC4	643 aa		4.75	□□□□□ -1.65
CCNL1-223	ENST00000481173	GAS7	O60861	476 aa		4.75	□□□□□ -1.65
CCNL1-223	ENST00000481173	HKR1	P10072	659 aa		4.75	□□□□□ -1.65
CCNL1-223	ENST00000481173	ZSCAN20	P17040	1043 aa	Predicted RBP	4.75	□□□□□ -1.65
CCNL1-223	ENST00000481173	GZMK	P49863	264 aa		4.75	□□□□□ -1.65
CCNL1-223	ENST00000481173	WNT3A	P56704	352 aa		4.75	□□□□□ -1.65
CCNL1-223	ENST00000481173	GUCY1B3	Q02153	619 aa		4.75	□□□□□ -1.65
CCNL1-223	ENST00000481173	TP53BP2	Q13625	1128 aa		4.75	□□□□□ -1.65
CCNL1-223	ENST00000481173	EPHA10	Q5JZY3	1008 aa		4.75	□□□□□ -1.65
CCNL1-223	ENST00000481173	C16orf86	Q6ZW13	317 aa		4.75	□□□□□ -1.65
CCNL1-223	ENST00000481173	DOK3	Q7L591	496 aa		4.75	□□□□□ -1.65
CCNL1-223	ENST00000481173	SYT12	Q8IV01	421 aa		4.75	□□□□□ -1.65
CCNL1-223	ENST00000481173	SYNPO	Q8N3V7	929 aa		4.75	□□□□□ -1.65
CCNL1-223	ENST00000481173	MSL3	Q8N5Y2	521 aa	Known RBP	4.75	□□□□□ -1.65
CCNL1-223	ENST00000481173	BOLL	Q8N9W6	283 aa	Known RBP	4.75	□□□□□ -1.65
CCNL1-223	ENST00000481173	SIMC1	Q8NDZ2	872 aa		4.75	□□□□□ -1.65
CCNL1-223	ENST00000481173	PPP1R14C	Q8TAE6	165 aa		4.75	□□□□□ -1.65
CCNL1-223	ENST00000481173	APPBP2	Q92624	585 aa		4.75	□□□□□ -1.65
CCNL1-223	ENST00000481173	ZMAT4	Q9H898	229 aa		4.75	□□□□□ -1.65
CCNL1-223	ENST00000481173	DKK2	Q9UBU2	259 aa		4.75	□□□□□ -1.65
CCNL1-223	ENST00000481173	MAP3K2	Q9Y2U5	619 aa		4.75	□□□□□ -1.65
CCNL1-223	ENST00000481173	MRPL42	Q9Y6G3	142 aa	Known RBP	4.75	□□□□□ -1.65
CCNL1-223	ENST00000481173	GAGE12B	A1L429	117 aa		4.74	□□□□□ -1.65
CCNL1-223	ENST00000481173	LCHN	A4D1U4	455 aa		4.74	□□□□□ -1.65
CCNL1-223	ENST00000481173	GAGE12H	A6NDE8	117 aa		4.74	□□□□□ -1.65
CCNL1-223	ENST00000481173	ELL2	O00472	640 aa	Predicted RBP	4.74	□□□□□ -1.65
CCNL1-223	ENST00000481173	KRTAP10-9	P60411	292 aa		4.74	□□□□□ -1.65
CCNL1-223	ENST00000481173	DSG1	Q02413	1049 aa		4.74	□□□□□ -1.65
CCNL1-223	ENST00000481173	DUSP2	Q05923	314 aa		4.74	□□□□□ -1.65
CCNL1-223	ENST00000481173	ERCC6L	Q2NKX8	1250 aa		4.74	□□□□□ -1.65
CCNL1-223	ENST00000481173	PDCD4	Q53EL6	469 aa	Known RBP	4.74	□□□□□ -1.65
CCNL1-223	ENST00000481173	GPRIN1	Q7Z2K8	1008 aa		4.74	□□□□□ -1.65
CCNL1-223	ENST00000481173	KIF18B	Q86Y91	864 aa		4.74	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms