RNA–Protein interactions for RNA: ENST00000481077.6

CNKSR1-206, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 3

Gene CNKSR1, Length 865 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-206ENST00000481077 EIF2AQ9BY44 585 aaKnown RBP17.14■□□□□ 0.33
CNKSR1-206ENST00000481077 PDZD7Q9H5P4 517 aa17.14■□□□□ 0.33
CNKSR1-206ENST00000481077 ZNF576Q9H609 170 aa17.14■□□□□ 0.33
CNKSR1-206ENST00000481077 MRPL44Q9H9J2 332 aaKnown RBP17.14■□□□□ 0.33
CNKSR1-206ENST00000481077 RC3H2Q9HBD1 1191 aaKnown RBP17.14■□□□□ 0.33
CNKSR1-206ENST00000481077 USP20Q9Y2K6 914 aa17.14■□□□□ 0.33
CNKSR1-206ENST00000481077 SZT2Q5T011 3432 aa17.14■□□□□ 0.33
CNKSR1-206ENST00000481077 ZNF202O95125 648 aa17.13■□□□□ 0.33
CNKSR1-206ENST00000481077 NPTXRO95502 500 aa17.13■□□□□ 0.33
CNKSR1-206ENST00000481077 EDN1P05305 212 aa17.13■□□□□ 0.33
CNKSR1-206ENST00000481077 NMT1P30419 496 aaKnown RBP17.13■□□□□ 0.33
CNKSR1-206ENST00000481077 GATMP50440 423 aa17.13■□□□□ 0.33
CNKSR1-206ENST00000481077 TAP1Q03518 808 aa17.13■□□□□ 0.33
CNKSR1-206ENST00000481077 PAN2Q504Q3 1202 aaKnown RBP17.13■□□□□ 0.33
CNKSR1-206ENST00000481077 FIBCD1Q8N539 461 aa17.13■□□□□ 0.33
CNKSR1-206ENST00000481077 KCNN1Q92952 543 aa17.13■□□□□ 0.33
CNKSR1-206ENST00000481077 ACO2Q99798 780 aaKnown RBP17.13■□□□□ 0.33
CNKSR1-206ENST00000481077 TBX20Q9UMR3 447 aa17.13■□□□□ 0.33
CNKSR1-206ENST00000481077 IPPQ9Y573 584 aa17.13■□□□□ 0.33
CNKSR1-206ENST00000481077 COL4A6Q14031 1691 aa17.13■□□□□ 0.33
CNKSR1-206ENST00000481077 LINC01553A4QN01 128 aa17.12■□□□□ 0.33
CNKSR1-206ENST00000481077 TBKBP1A7MCY6 615 aa17.12■□□□□ 0.33
CNKSR1-206ENST00000481077 GTF2BQ00403 316 aa17.12■□□□□ 0.33
CNKSR1-206ENST00000481077 GLB1LQ6UWU2 654 aa17.12■□□□□ 0.33
CNKSR1-206ENST00000481077 ZNF720Q7Z2F6 126 aa17.12■□□□□ 0.33
CNKSR1-206ENST00000481077 MRPL10Q7Z7H8 261 aaKnown RBP17.12■□□□□ 0.33
CNKSR1-206ENST00000481077 GRAMD1CQ8IYS0 662 aa17.12■□□□□ 0.33
CNKSR1-206ENST00000481077 DEFB123Q8N688 67 aa17.12■□□□□ 0.33
CNKSR1-206ENST00000481077 TMEM87AQ8NBN3 555 aa17.12■□□□□ 0.33
CNKSR1-206ENST00000481077 RSPH1Q8WYR4 309 aa17.12■□□□□ 0.33
CNKSR1-206ENST00000481077 LPPQ93052 612 aa17.12■□□□□ 0.33
CNKSR1-206ENST00000481077 BICD1Q96G01 975 aa17.12■□□□□ 0.33
CNKSR1-206ENST00000481077 CCDC34Q96HJ3 373 aa17.12■□□□□ 0.33
CNKSR1-206ENST00000481077 FIZ1Q96SL8 496 aa17.12■□□□□ 0.33
CNKSR1-206ENST00000481077 TARS2Q9BW92 718 aaKnown RBP17.12■□□□□ 0.33
CNKSR1-206ENST00000481077 TMEM117Q9H0C3 514 aa17.12■□□□□ 0.33
CNKSR1-206ENST00000481077 BLZF1Q9H2G9 400 aa17.12■□□□□ 0.33
CNKSR1-206ENST00000481077 TTYH1Q9H313 450 aaPredicted RBP17.12■□□□□ 0.33
CNKSR1-206ENST00000481077 SEMA6BQ9H3T3 888 aa17.12■□□□□ 0.33
CNKSR1-206ENST00000481077 ST6GALNAC4Q9H4F1 302 aa17.12■□□□□ 0.33
CNKSR1-206ENST00000481077 UBN1Q9NPG3 1134 aa17.12■□□□□ 0.33
CNKSR1-206ENST00000481077 OLFML3Q9NRN5 406 aa17.12■□□□□ 0.33
CNKSR1-206ENST00000481077 TBC1D7Q9P0N9 293 aa17.12■□□□□ 0.33
CNKSR1-206ENST00000481077 TNFSF13BQ9Y275 285 aa17.12■□□□□ 0.33
CNKSR1-206ENST00000481077 ARHGEF15O94989 841 aa17.11■□□□□ 0.33
CNKSR1-206ENST00000481077 GCNT3O95395 438 aa17.11■□□□□ 0.33
CNKSR1-206ENST00000481077 MYL1P05976 194 aa17.11■□□□□ 0.33
CNKSR1-206ENST00000481077 ITGA4P13612 1032 aa17.11■□□□□ 0.33
CNKSR1-206ENST00000481077 CASP1P29466 404 aa17.11■□□□□ 0.33
CNKSR1-206ENST00000481077 FAM160A1Q05DH4 1040 aa17.11■□□□□ 0.33
CNKSR1-206ENST00000481077 COASYQ13057 564 aa17.11■□□□□ 0.33
CNKSR1-206ENST00000481077 CUL4BQ13620 913 aa17.11■□□□□ 0.33
CNKSR1-206ENST00000481077 DCAF4L1Q3SXM0 396 aa17.11■□□□□ 0.33
CNKSR1-206ENST00000481077 CLLU1OSQ5K130 101 aa17.11■□□□□ 0.33
CNKSR1-206ENST00000481077 EEF1DP3Q658K8 133 aa17.11■□□□□ 0.33
CNKSR1-206ENST00000481077 KANK3Q6NY19 840 aa17.11■□□□□ 0.33
CNKSR1-206ENST00000481077 ZPBP2Q6X784 338 aa17.11■□□□□ 0.33
CNKSR1-206ENST00000481077 KRBA2Q6ZNG9 492 aa17.11■□□□□ 0.33
CNKSR1-206ENST00000481077 FMR1NBQ8N0W7 255 aaPredicted RBP17.11■□□□□ 0.33
CNKSR1-206ENST00000481077 SMG8Q8ND04 991 aaKnown RBP17.11■□□□□ 0.33
CNKSR1-206ENST00000481077 HELQQ8TDG4 1101 aa17.11■□□□□ 0.33
CNKSR1-206ENST00000481077 HVCN1Q96D96 273 aa17.11■□□□□ 0.33
CNKSR1-206ENST00000481077 FAM161BQ96MY7 647 aa17.11■□□□□ 0.33
CNKSR1-206ENST00000481077 TGS1Q96RS0 853 aaKnown RBP17.11■□□□□ 0.33
CNKSR1-206ENST00000481077 TCHPQ9BT92 498 aa17.11■□□□□ 0.33
CNKSR1-206ENST00000481077 NXF3Q9H4D5 531 aaKnown RBP17.11■□□□□ 0.33
CNKSR1-206ENST00000481077 RNF19AQ9NV58 838 aa17.11■□□□□ 0.33
CNKSR1-206ENST00000481077 HES2Q9Y543 173 aa17.11■□□□□ 0.33
CNKSR1-206ENST00000481077 CHD9Q3L8U1 2897 aa17.11■□□□□ 0.33
CNKSR1-206ENST00000481077 PVALEFA0A1B0GWK0 134 aa17.1■□□□□ 0.33
CNKSR1-206ENST00000481077 MEIS3P2A8K0S8 358 aa17.1■□□□□ 0.33
CNKSR1-206ENST00000481077 HNRNPDLO14979 420 aaKnown RBP17.1■□□□□ 0.33
CNKSR1-206ENST00000481077 TOM1L1O75674 476 aa17.1■□□□□ 0.33
CNKSR1-206ENST00000481077 LIG4P49917 911 aa17.1■□□□□ 0.33
CNKSR1-206ENST00000481077 ALCAMQ13740 583 aa17.1■□□□□ 0.33
CNKSR1-206ENST00000481077 ZNF568Q3ZCX4 644 aa17.1■□□□□ 0.33
CNKSR1-206ENST00000481077 ZC2HC1CQ53FD0 456 aaPredicted RBP17.1■□□□□ 0.33
CNKSR1-206ENST00000481077 AGMOQ6ZNB7 445 aa17.1■□□□□ 0.33
CNKSR1-206ENST00000481077 STXBP4Q6ZWJ1 553 aa17.1■□□□□ 0.33
CNKSR1-206ENST00000481077 UNC13DQ70J99 1090 aa17.1■□□□□ 0.33
CNKSR1-206ENST00000481077 Q7L0L9 218 aa17.1■□□□□ 0.33
CNKSR1-206ENST00000481077 SAMD11Q96NU1 681 aa17.1■□□□□ 0.33
CNKSR1-206ENST00000481077 CASD1Q96PB1 797 aa17.1■□□□□ 0.33
CNKSR1-206ENST00000481077 APOL6Q9BWW8 343 aa17.1■□□□□ 0.33
CNKSR1-206ENST00000481077 MRPL9Q9BYD2 267 aaKnown RBP17.1■□□□□ 0.33
CNKSR1-206ENST00000481077 RSAD1Q9HA92 442 aa17.1■□□□□ 0.33
CNKSR1-206ENST00000481077 MTUS1Q9ULD2 1270 aa17.1■□□□□ 0.33
CNKSR1-206ENST00000481077 RWDD3Q9Y3V2 267 aa17.1■□□□□ 0.33
CNKSR1-206ENST00000481077 PCDHB13Q9Y5F0 798 aa17.1■□□□□ 0.33
CNKSR1-206ENST00000481077 MRPL42Q9Y6G3 142 aaKnown RBP17.1■□□□□ 0.33
CNKSR1-206ENST00000481077 GTPBP6O43824 516 aaPredicted RBP17.09■□□□□ 0.33
CNKSR1-206ENST00000481077 MATR3P43243 847 aaKnown RBP eCLIP17.09■□□□□ 0.33
CNKSR1-206ENST00000481077 ERVK-21P61565 698 aa17.09■□□□□ 0.33
CNKSR1-206ENST00000481077 SNW1Q13573 536 aaKnown RBP17.09■□□□□ 0.33
CNKSR1-206ENST00000481077 NOMO2Q5JPE7 1267 aa17.09■□□□□ 0.33
CNKSR1-206ENST00000481077 SPOUT1Q5T280 376 aaKnown RBP17.09■□□□□ 0.33
CNKSR1-206ENST00000481077 MPZL3Q6UWV2 235 aa17.09■□□□□ 0.33
CNKSR1-206ENST00000481077 MAP4K3Q8IVH8 894 aa17.09■□□□□ 0.33
CNKSR1-206ENST00000481077 LRRC43Q8N309 656 aa17.09■□□□□ 0.33
CNKSR1-206ENST00000481077 URGCPQ8TCY9 931 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms