RNA–Protein interactions for RNA: ENST00000480004.1

CAPN9-204, Transcript of calpain 9, humanhuman

TSL 2

Gene CAPN9, Length 510 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-204ENST00000480004 TOP1P11387 765 aaKnown RBP5.97□□□□□ -1.45
CAPN9-204ENST00000480004 SCG2P13521 617 aa5.97□□□□□ -1.45
CAPN9-204ENST00000480004 LAG3P18627 525 aa5.97□□□□□ -1.45
CAPN9-204ENST00000480004 ERVFC1P60507 584 aa5.97□□□□□ -1.45
CAPN9-204ENST00000480004 RBM10P98175 930 aaKnown RBP5.97□□□□□ -1.45
CAPN9-204ENST00000480004 COL9A3Q14050 684 aaPredicted RBP5.97□□□□□ -1.45
CAPN9-204ENST00000480004 LPIN1Q14693 890 aa5.97□□□□□ -1.45
CAPN9-204ENST00000480004 SF3A1Q15459 793 aaKnown RBP5.97□□□□□ -1.45
CAPN9-204ENST00000480004 PCSK7Q16549 785 aa5.97□□□□□ -1.45
CAPN9-204ENST00000480004 ZNF528Q3MIS6 628 aa5.97□□□□□ -1.45
CAPN9-204ENST00000480004 PAN2Q504Q3 1202 aaKnown RBP5.97□□□□□ -1.45
CAPN9-204ENST00000480004 FBXO47Q5MNV8 452 aa5.97□□□□□ -1.45
CAPN9-204ENST00000480004 KIAA1841Q6NSI8 718 aa5.97□□□□□ -1.45
CAPN9-204ENST00000480004 LLGL2Q6P1M3 1020 aa5.97□□□□□ -1.45
CAPN9-204ENST00000480004 CCNJLQ8IV13 435 aa5.97□□□□□ -1.45
CAPN9-204ENST00000480004 IFNL3Q8IZI9 196 aa5.97□□□□□ -1.45
CAPN9-204ENST00000480004 TMEM57Q8N5G2 664 aa5.97□□□□□ -1.45
CAPN9-204ENST00000480004 SYTL5Q8TDW5 730 aaPredicted RBP5.97□□□□□ -1.45
CAPN9-204ENST00000480004 ATRIPQ8WXE1 791 aa5.97□□□□□ -1.45
CAPN9-204ENST00000480004 RIN2Q8WYP3 895 aaPredicted RBP5.97□□□□□ -1.45
CAPN9-204ENST00000480004 MRPS27Q92552 414 aaKnown RBP5.97□□□□□ -1.45
CAPN9-204ENST00000480004 APPBP2Q92624 585 aa5.97□□□□□ -1.45
CAPN9-204ENST00000480004 TCF25Q9BQ70 676 aa5.97□□□□□ -1.45
CAPN9-204ENST00000480004 ZKSCAN3Q9BRR0 538 aa5.97□□□□□ -1.45
CAPN9-204ENST00000480004 NAPBQ9H115 298 aa5.97□□□□□ -1.45
CAPN9-204ENST00000480004 SMOC2Q9H3U7 446 aa5.97□□□□□ -1.45
CAPN9-204ENST00000480004 AVENQ9NQS1 362 aaPredicted RBP5.97□□□□□ -1.45
CAPN9-204ENST00000480004 SETD4Q9NVD3 440 aa5.97□□□□□ -1.45
CAPN9-204ENST00000480004 DZANK1Q9NVP4 752 aa5.97□□□□□ -1.45
CAPN9-204ENST00000480004 MAP3K20Q9NYL2 800 aaKnown RBP5.97□□□□□ -1.45
CAPN9-204ENST00000480004 ANGPTL2Q9UKU9 493 aa5.97□□□□□ -1.45
CAPN9-204ENST00000480004 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.97□□□□□ -1.45
CAPN9-204ENST00000480004 MRPL11Q9Y3B7 192 aaKnown RBP5.97□□□□□ -1.45
CAPN9-204ENST00000480004 SIT1Q9Y3P8 196 aa5.97□□□□□ -1.45
CAPN9-204ENST00000480004 PCDHB7Q9Y5E2 793 aa5.97□□□□□ -1.45
CAPN9-204ENST00000480004 KIAA1217Q5T5P2 1943 aa5.97□□□□□ -1.45
CAPN9-204ENST00000480004 TRIOO75962 3097 aa5.97□□□□□ -1.45
CAPN9-204ENST00000480004 TMEM238LA0A1B0GVL6 79 aa5.96□□□□□ -1.46
CAPN9-204ENST00000480004 GPAA1O43292 621 aa5.96□□□□□ -1.46
CAPN9-204ENST00000480004 TBC1D4O60343 1298 aa5.96□□□□□ -1.46
CAPN9-204ENST00000480004 RAB11FIP3O75154 756 aa5.96□□□□□ -1.46
CAPN9-204ENST00000480004 LGALS2P05162 132 aa5.96□□□□□ -1.46
CAPN9-204ENST00000480004 EIF2AK2P19525 551 aaKnown RBP5.96□□□□□ -1.46
CAPN9-204ENST00000480004 PPM1AP35813 382 aa5.96□□□□□ -1.46
CAPN9-204ENST00000480004 NOVP48745 357 aa5.96□□□□□ -1.46
CAPN9-204ENST00000480004 ADAM17P78536 824 aa5.96□□□□□ -1.46
CAPN9-204ENST00000480004 CTBSQ01459 385 aa5.96□□□□□ -1.46
CAPN9-204ENST00000480004 PPARAQ07869 468 aa5.96□□□□□ -1.46
CAPN9-204ENST00000480004 GIT2Q14161 759 aa5.96□□□□□ -1.46
CAPN9-204ENST00000480004 NEDD9Q14511 834 aa5.96□□□□□ -1.46
CAPN9-204ENST00000480004 SMC1AQ14683 1233 aaKnown RBP5.96□□□□□ -1.46
CAPN9-204ENST00000480004 USH1GQ495M9 461 aa5.96□□□□□ -1.46
CAPN9-204ENST00000480004 PPM1JQ5JR12 505 aa5.96□□□□□ -1.46
CAPN9-204ENST00000480004 ODR4Q5SWX8 454 aa5.96□□□□□ -1.46
CAPN9-204ENST00000480004 GPATCH4Q5T3I0 446 aaKnown RBP5.96□□□□□ -1.46
CAPN9-204ENST00000480004 ZNF468Q5VIY5 522 aaPredicted RBP5.96□□□□□ -1.46
CAPN9-204ENST00000480004 PLPP4Q5VZY2 271 aa5.96□□□□□ -1.46
CAPN9-204ENST00000480004 ZKSCAN2Q63HK3 967 aa5.96□□□□□ -1.46
CAPN9-204ENST00000480004 SV2AQ7L0J3 742 aa5.96□□□□□ -1.46
CAPN9-204ENST00000480004 RAB44Q7Z6P3 723 aaPredicted RBP5.96□□□□□ -1.46
CAPN9-204ENST00000480004 ZNF654Q8IZM8 581 aa5.96□□□□□ -1.46
CAPN9-204ENST00000480004 SAMD3Q8N6K7 520 aa5.96□□□□□ -1.46
CAPN9-204ENST00000480004 NETO1Q8TDF5 533 aa5.96□□□□□ -1.46
CAPN9-204ENST00000480004 TNPO1Q92973 898 aaKnown RBP5.96□□□□□ -1.46
CAPN9-204ENST00000480004 NXPE3Q969Y0 559 aa5.96□□□□□ -1.46
CAPN9-204ENST00000480004 DRC1Q96MC2 740 aa5.96□□□□□ -1.46
CAPN9-204ENST00000480004 OSMRQ99650 979 aa5.96□□□□□ -1.46
CAPN9-204ENST00000480004 OXCT2Q9BYC2 517 aaPredicted RBP5.96□□□□□ -1.46
CAPN9-204ENST00000480004 BHLHE41Q9C0J9 482 aaPredicted RBP5.96□□□□□ -1.46
CAPN9-204ENST00000480004 KCNK12Q9HB15 430 aa5.96□□□□□ -1.46
CAPN9-204ENST00000480004 ZFYVE1Q9HBF4 777 aa5.96□□□□□ -1.46
CAPN9-204ENST00000480004 PXMP2Q9NR77 195 aa5.96□□□□□ -1.46
CAPN9-204ENST00000480004 IL17RBQ9NRM6 502 aa5.96□□□□□ -1.46
CAPN9-204ENST00000480004 GGT7Q9UJ14 662 aa5.96□□□□□ -1.46
CAPN9-204ENST00000480004 GMEB2Q9UKD1 530 aa5.96□□□□□ -1.46
CAPN9-204ENST00000480004 FBXO4Q9UKT5 387 aa5.96□□□□□ -1.46
CAPN9-204ENST00000480004 USP18Q9UMW8 372 aa5.96□□□□□ -1.46
CAPN9-204ENST00000480004 PCDHGA2Q9Y5H1 932 aa5.96□□□□□ -1.46
CAPN9-204ENST00000480004 HCFC2Q9Y5Z7 792 aa5.96□□□□□ -1.46
CAPN9-204ENST00000480004 FRMPD2Q68DX3 1309 aaPredicted RBP5.96□□□□□ -1.46
CAPN9-204ENST00000480004 CHD8Q9HCK8 2581 aa5.95□□□□□ -1.46
CAPN9-204ENST00000480004 CDC14CA4D256 554 aa5.95□□□□□ -1.46
CAPN9-204ENST00000480004 ZBTB42B2RXF5 422 aa5.95□□□□□ -1.46
CAPN9-204ENST00000480004 SLC30A4O14863 429 aa5.95□□□□□ -1.46
CAPN9-204ENST00000480004 RNF113AO15541 343 aaKnown RBP5.95□□□□□ -1.46
CAPN9-204ENST00000480004 RANBP6O60518 1105 aaKnown RBP5.95□□□□□ -1.46
CAPN9-204ENST00000480004 FOXD2O60548 495 aaPredicted RBP5.95□□□□□ -1.46
CAPN9-204ENST00000480004 SIN3BO75182 1162 aa5.95□□□□□ -1.46
CAPN9-204ENST00000480004 HMMRO75330 724 aa5.95□□□□□ -1.46
CAPN9-204ENST00000480004 PDHBP11177 359 aa5.95□□□□□ -1.46
CAPN9-204ENST00000480004 MYCLP12524 364 aaPredicted RBP5.95□□□□□ -1.46
CAPN9-204ENST00000480004 ITPKAP23677 461 aa5.95□□□□□ -1.46
CAPN9-204ENST00000480004 SARSP49591 514 aaKnown RBP5.95□□□□□ -1.46
CAPN9-204ENST00000480004 RACK1P63244 317 aaKnown RBP5.95□□□□□ -1.46
CAPN9-204ENST00000480004 ZNF543Q08ER8 600 aa5.95□□□□□ -1.46
CAPN9-204ENST00000480004 MGAT3Q09327 533 aa5.95□□□□□ -1.46
CAPN9-204ENST00000480004 PAK2Q13177 524 aa5.95□□□□□ -1.46
CAPN9-204ENST00000480004 GNPTABQ3T906 1256 aa5.95□□□□□ -1.46
CAPN9-204ENST00000480004 ZNF394Q53GI3 561 aa5.95□□□□□ -1.46
CAPN9-204ENST00000480004 SPECC1Q5M775 1068 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms