RNA–Protein interactions for RNA: ENST00000478890.5

SRRM1-211, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-211ENST00000478890 ADAM8P78325 824 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 CD69Q07108 199 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 DDB1Q16531 1140 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 ERCC6LQ2NKX8 1250 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 CCDC144BQ3MJ40 725 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 PLEKHG4Q58EX7 1191 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 TAF7LQ5H9L4 462 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 HECTD2Q5U5R9 776 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 STRIP1Q5VSL9 837 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 CCDC62Q6P9F0 684 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 SPATA31D4Q6ZUB0 917 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 MRGPREQ86SM8 312 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 LRRTM3Q86VH5 581 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 XYLT1Q86Y38 959 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 VRK3Q8IV63 474 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 NIM1KQ8IY84 436 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 CMTR2Q8IYT2 770 aaKnown RBP2.05□□□□□ -2.08
SRRM1-211ENST00000478890 ULK2Q8IYT8 1036 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 RPUSD2Q8IZ73 545 aaKnown RBP2.05□□□□□ -2.08
SRRM1-211ENST00000478890 PPM1KQ8N3J5 372 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 SYNPOQ8N3V7 929 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 OR2W6PQ8NHA6 318 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 GAB3Q8WWW8 586 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 PHACTR3Q96KR7 559 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 MLST8Q9BVC4 326 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 OSBPL6Q9BZF3 934 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 ZMAT4Q9H898 229 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 FANCLQ9NW38 375 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 TMEM260Q9NX78 707 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 ANKFY1Q9P2R3 1169 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 CLCA2Q9UQC9 943 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 XDHP47989 1333 aa2.05□□□□□ -2.08
SRRM1-211ENST00000478890 RNASET2O00584 256 aaKnown RBP2.04□□□□□ -2.08
SRRM1-211ENST00000478890 HOXA3O43365 443 aaPredicted RBP2.04□□□□□ -2.08
SRRM1-211ENST00000478890 NCR1O76036 304 aa2.04□□□□□ -2.08
SRRM1-211ENST00000478890 NDUFA10O95299 355 aa2.04□□□□□ -2.08
SRRM1-211ENST00000478890 LY86O95711 162 aa2.04□□□□□ -2.08
SRRM1-211ENST00000478890 F2P00734 622 aa2.04□□□□□ -2.08
SRRM1-211ENST00000478890 HLA-DOAP06340 250 aa2.04□□□□□ -2.08
SRRM1-211ENST00000478890 CLEC2LP0C7M8 214 aa2.04□□□□□ -2.08
SRRM1-211ENST00000478890 HOXB6P17509 224 aaKnown RBP2.04□□□□□ -2.08
SRRM1-211ENST00000478890 MGAT1P26572 445 aa2.04□□□□□ -2.08
SRRM1-211ENST00000478890 CANXP27824 592 aaKnown RBP2.04□□□□□ -2.08
SRRM1-211ENST00000478890 AVPR1BP47901 424 aa2.04□□□□□ -2.08
SRRM1-211ENST00000478890 RNASE9P60153 205 aaKnown RBP2.04□□□□□ -2.08
SRRM1-211ENST00000478890 DSG1Q02413 1049 aa2.04□□□□□ -2.08
SRRM1-211ENST00000478890 MAPK7Q13164 816 aa2.04□□□□□ -2.08
SRRM1-211ENST00000478890 LRRC32Q14392 662 aa2.04□□□□□ -2.08
SRRM1-211ENST00000478890 VPS72Q15906 364 aa2.04□□□□□ -2.08
SRRM1-211ENST00000478890 ZBTB41Q5SVQ8 909 aa2.04□□□□□ -2.08
SRRM1-211ENST00000478890 MBNL2Q5VZF2 373 aaKnown RBP2.04□□□□□ -2.08
SRRM1-211ENST00000478890 IQSEC1Q6DN90 963 aa2.04□□□□□ -2.08
SRRM1-211ENST00000478890 PDZD4Q76G19 769 aaPredicted RBP2.04□□□□□ -2.08
SRRM1-211ENST00000478890 KANSL1Q7Z3B3 1105 aa2.04□□□□□ -2.08
SRRM1-211ENST00000478890 GDF7Q7Z4P5 450 aa2.04□□□□□ -2.08
SRRM1-211ENST00000478890 HDGFL2Q7Z4V5 671 aaPredicted RBP2.04□□□□□ -2.08
SRRM1-211ENST00000478890 DHX37Q8IY37 1157 aaKnown RBP2.04□□□□□ -2.08
SRRM1-211ENST00000478890 AHI1Q8N157 1196 aa2.04□□□□□ -2.08
SRRM1-211ENST00000478890 RNF169Q8NCN4 708 aa2.04□□□□□ -2.08
SRRM1-211ENST00000478890 PIK3C3Q8NEB9 887 aa2.04□□□□□ -2.08
SRRM1-211ENST00000478890 OR10H5Q8NGA6 315 aa2.04□□□□□ -2.08
SRRM1-211ENST00000478890 UBXN4Q92575 508 aa2.04□□□□□ -2.08
SRRM1-211ENST00000478890 TFAP2CQ92754 450 aa2.04□□□□□ -2.08
SRRM1-211ENST00000478890 DCLRE1CQ96SD1 692 aaKnown RBP2.04□□□□□ -2.08
SRRM1-211ENST00000478890 UHRF1Q96T88 793 aaPredicted RBP2.04□□□□□ -2.08
SRRM1-211ENST00000478890 NELL2Q99435 816 aa2.04□□□□□ -2.08
SRRM1-211ENST00000478890 FEZ1Q99689 392 aa2.04□□□□□ -2.08
SRRM1-211ENST00000478890 ANO3Q9BYT9 981 aa2.04□□□□□ -2.08
SRRM1-211ENST00000478890 HAPLN2Q9GZV7 340 aa2.04□□□□□ -2.08
SRRM1-211ENST00000478890 KCNH6Q9H252 994 aa2.04□□□□□ -2.08
SRRM1-211ENST00000478890 KANSL2Q9H9L4 492 aa2.04□□□□□ -2.08
SRRM1-211ENST00000478890 RSAD1Q9HA92 442 aa2.04□□□□□ -2.08
SRRM1-211ENST00000478890 SLTMQ9NWH9 1034 aaKnown RBP eCLIP2.04□□□□□ -2.08
SRRM1-211ENST00000478890 RNF181Q9P0P0 153 aa2.04□□□□□ -2.08
SRRM1-211ENST00000478890 PTGFRNQ9P2B2 879 aa2.04□□□□□ -2.08
SRRM1-211ENST00000478890 TESQ9UGI8 421 aaKnown RBP2.04□□□□□ -2.08
SRRM1-211ENST00000478890 TRPS1Q9UHF7 1281 aa2.04□□□□□ -2.08
SRRM1-211ENST00000478890 PACSIN3Q9UKS6 424 aa2.04□□□□□ -2.08
SRRM1-211ENST00000478890 WDR3Q9UNX4 943 aaKnown RBP eCLIP2.04□□□□□ -2.08
SRRM1-211ENST00000478890 FZD1Q9UP38 647 aa2.04□□□□□ -2.08
SRRM1-211ENST00000478890 NOC2LQ9Y3T9 749 aaKnown RBP2.04□□□□□ -2.08
SRRM1-211ENST00000478890 SPATA31A6Q5VVP1 1343 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 A0A0A6YYK5 440 aaPredicted RBP2.03□□□□□ -2.08
SRRM1-211ENST00000478890 LCHNA4D1U4 455 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 UNC119BA6NIH7 251 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 B5MCH6 92 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 ELL2O00472 640 aaPredicted RBP2.03□□□□□ -2.08
SRRM1-211ENST00000478890 LPXNO60711 386 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 ITGA10O75578 1167 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 RFPL3O75679 317 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 FKBP9O95302 570 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 CFBP00751 764 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 PFKMP08237 780 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 PTPN7P35236 360 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 LSSP48449 732 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 GPR15P49685 360 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 RAP2BP61225 183 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 GUCY1B3Q02153 619 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 APBA1Q02410 837 aa2.03□□□□□ -2.08
SRRM1-211ENST00000478890 NHLH2Q02577 135 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms