RNA–Protein interactions for RNA: ENST00000478015.5

LCLAT1-209, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2

Gene LCLAT1, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-209ENST00000478015 ZDBF2Q9HCK1 2354 aa11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 NPHP3-ACAD11A0A0J9YXS1 232 aa11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 ARHGEF35A5YM69 484 aa11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 H3BQV1 296 aa11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 NPTXRO95502 500 aa11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 EFEMP2O95967 443 aa11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 PRPHP41219 470 aa11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 ALDH7A1P49419 539 aaKnown RBP11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 SCNN1GP51170 649 aa11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 UBE3AQ05086 875 aa11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 ZP2Q05996 745 aa11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 ZRSR1Q15695 479 aaKnown RBP11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 RINT1Q6NUQ1 792 aa11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 NOTUMQ6P988 496 aa11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 DTHD1Q6ZMT9 781 aa11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 C1orf186Q6ZWK4 172 aa11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 MRPL43Q8N983 215 aaKnown RBP11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 SMRP1Q8NCR6 262 aa11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 ERMNQ8TAM6 284 aa11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 APOL5Q9BWW9 433 aa11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 PDZD7Q9H5P4 517 aa11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 AAASQ9NRG9 546 aa11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 LZTS1Q9Y250 596 aa11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 TECTAO75443 2155 aa11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 MUC6Q6W4X9 2439 aa11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 MEFVO15553 781 aaPredicted RBP11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 EYA4O95677 639 aa11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 SYT1P21579 422 aa11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 MCM2P49736 904 aa11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 NDUFV1P49821 464 aa11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 RAB27AP51159 221 aa11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 DSC1Q08554 894 aa11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 TFDP1Q14186 410 aa11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 SMAD2Q15796 467 aaKnown RBP11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 ARSHQ5FYA8 562 aa11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 NT5DC1Q5TFE4 455 aa11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 LLGL2Q6P1M3 1020 aa11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 SYCE2Q6PIF2 218 aa11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 TMC7Q7Z402 723 aa11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 COLGALT2Q8IYK4 626 aa11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 VPS52Q8N1B4 723 aa11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 TMEM130Q8N3G9 435 aa11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 MCPH1Q8NEM0 835 aa11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 IL27Q8NEV9 243 aa11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 B3GALT6Q96L58 329 aa11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 CCDC43Q96MW1 224 aaKnown RBP11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 ZBP1Q9H171 429 aa11.32□□□□□ -0.6
LCLAT1-209ENST00000478015 USP34Q70CQ2 3546 aa11.31□□□□□ -0.6
LCLAT1-209ENST00000478015 NRP1O14786 923 aa11.31□□□□□ -0.6
LCLAT1-209ENST00000478015 INPPL1O15357 1258 aa11.31□□□□□ -0.6
LCLAT1-209ENST00000478015 HIP1RO75146 1068 aa11.31□□□□□ -0.6
LCLAT1-209ENST00000478015 LIG1P18858 919 aa11.31□□□□□ -0.6
LCLAT1-209ENST00000478015 CACNB1Q02641 598 aaPredicted RBP11.31□□□□□ -0.6
LCLAT1-209ENST00000478015 RNASELQ05823 741 aaKnown RBP11.31□□□□□ -0.6
LCLAT1-209ENST00000478015 NAB2Q15742 525 aa11.31□□□□□ -0.6
LCLAT1-209ENST00000478015 SPECC1Q5M775 1068 aa11.31□□□□□ -0.6
LCLAT1-209ENST00000478015 HYIQ5T013 277 aa11.31□□□□□ -0.6
LCLAT1-209ENST00000478015 HAUS3Q68CZ6 603 aa11.31□□□□□ -0.6
LCLAT1-209ENST00000478015 PPP4R3CPQ6ZMV5 832 aa11.31□□□□□ -0.6
LCLAT1-209ENST00000478015 GJD3Q8N144 294 aa11.31□□□□□ -0.6
LCLAT1-209ENST00000478015 CEP120Q8N960 986 aa11.31□□□□□ -0.6
LCLAT1-209ENST00000478015 MRPL9Q9BYD2 267 aaKnown RBP11.31□□□□□ -0.6
LCLAT1-209ENST00000478015 S1PR5Q9H228 398 aa11.31□□□□□ -0.6
LCLAT1-209ENST00000478015 ENTPD7Q9NQZ7 604 aa11.31□□□□□ -0.6
LCLAT1-209ENST00000478015 PRG3Q9Y2Y8 225 aaPredicted RBP11.31□□□□□ -0.6
LCLAT1-209ENST00000478015 HCFC2Q9Y5Z7 792 aa11.31□□□□□ -0.6
LCLAT1-209ENST00000478015 CLIC4Q9Y696 253 aa11.31□□□□□ -0.6
LCLAT1-209ENST00000478015 CNTNAP2Q9UHC6 1331 aa11.31□□□□□ -0.6
LCLAT1-209ENST00000478015 C19orf67A6NJJ6 358 aa11.3□□□□□ -0.6
LCLAT1-209ENST00000478015 LAD1O00515 517 aa11.3□□□□□ -0.6
LCLAT1-209ENST00000478015 PTGESO14684 152 aa11.3□□□□□ -0.6
LCLAT1-209ENST00000478015 LILRB3O75022 631 aa11.3□□□□□ -0.6
LCLAT1-209ENST00000478015 SSBP05455 408 aaKnown RBP eCLIP11.3□□□□□ -0.6
LCLAT1-209ENST00000478015 SKIP12755 728 aa11.3□□□□□ -0.6
LCLAT1-209ENST00000478015 ITGA4P13612 1032 aa11.3□□□□□ -0.6
LCLAT1-209ENST00000478015 MUTP22033 750 aa11.3□□□□□ -0.6
LCLAT1-209ENST00000478015 AXLP30530 894 aa11.3□□□□□ -0.6
LCLAT1-209ENST00000478015 NAMPTP43490 491 aa11.3□□□□□ -0.6
LCLAT1-209ENST00000478015 NPTX2P47972 431 aa11.3□□□□□ -0.6
LCLAT1-209ENST00000478015 SLC12A3P55017 1021 aa11.3□□□□□ -0.6
LCLAT1-209ENST00000478015 COASYQ13057 564 aa11.3□□□□□ -0.6
LCLAT1-209ENST00000478015 PTPAQ15257 358 aa11.3□□□□□ -0.6
LCLAT1-209ENST00000478015 SF3A1Q15459 793 aaKnown RBP11.3□□□□□ -0.6
LCLAT1-209ENST00000478015 FAM187BQ17R55 369 aa11.3□□□□□ -0.6
LCLAT1-209ENST00000478015 SLC27A1Q6PCB7 646 aa11.3□□□□□ -0.6
LCLAT1-209ENST00000478015 RNF216Q9NWF9 866 aaPredicted RBP11.3□□□□□ -0.6
LCLAT1-209ENST00000478015 CD207Q9UJ71 328 aa11.3□□□□□ -0.6
LCLAT1-209ENST00000478015 USP15Q9Y4E8 981 aaPredicted RBP11.3□□□□□ -0.6
LCLAT1-209ENST00000478015 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.3□□□□□ -0.6
LCLAT1-209ENST00000478015 VWA8A3KMH1 1905 aa11.3□□□□□ -0.6
LCLAT1-209ENST00000478015 PLXNA3P51805 1871 aa11.3□□□□□ -0.6
LCLAT1-209ENST00000478015 VPS37CA5D8V6 355 aaPredicted RBP11.29□□□□□ -0.6
LCLAT1-209ENST00000478015 ACKR2O00590 384 aa11.29□□□□□ -0.6
LCLAT1-209ENST00000478015 ABLIM1O14639 778 aa11.29□□□□□ -0.6
LCLAT1-209ENST00000478015 CLASP2O75122 1294 aaKnown RBP11.29□□□□□ -0.6
LCLAT1-209ENST00000478015 WEE2P0C1S8 567 aa11.29□□□□□ -0.6
LCLAT1-209ENST00000478015 PPM1AP35813 382 aa11.29□□□□□ -0.6
LCLAT1-209ENST00000478015 PEX3P56589 373 aa11.29□□□□□ -0.6
LCLAT1-209ENST00000478015 RESTQ13127 1097 aa11.29□□□□□ -0.6
LCLAT1-209ENST00000478015 CSPP1Q1MSJ5 1256 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms