RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 PIDD1Q9HB75 910 aa22.71■■□□□ 1.23
PDLIM1-202ENST00000477757 MIA3Q5JRA6 1907 aa22.7■■□□□ 1.23
PDLIM1-202ENST00000477757 B3GNT9Q6UX72 402 aa22.7■■□□□ 1.22
PDLIM1-202ENST00000477757 GJA10Q969M2 543 aa22.7■■□□□ 1.22
PDLIM1-202ENST00000477757 SHDQ96IW2 340 aa22.7■■□□□ 1.22
PDLIM1-202ENST00000477757 ZFP37Q9Y6Q3 630 aaPredicted RBP22.7■■□□□ 1.22
PDLIM1-202ENST00000477757 NID2Q14112 1375 aa22.69■■□□□ 1.22
PDLIM1-202ENST00000477757 CCDC196A0A1B0GTZ2 297 aa22.69■■□□□ 1.22
PDLIM1-202ENST00000477757 LRRN2O75325 713 aa22.69■■□□□ 1.22
PDLIM1-202ENST00000477757 SPATA31D3P0C874 917 aa22.69■■□□□ 1.22
PDLIM1-202ENST00000477757 NCLP19338 710 aaKnown RBP22.69■■□□□ 1.22
PDLIM1-202ENST00000477757 SDHBP21912 280 aa22.69■■□□□ 1.22
PDLIM1-202ENST00000477757 HOXA11P31270 313 aaPredicted RBP22.69■■□□□ 1.22
PDLIM1-202ENST00000477757 USP11P51784 963 aa22.69■■□□□ 1.22
PDLIM1-202ENST00000477757 DSC1Q08554 894 aa22.69■■□□□ 1.22
PDLIM1-202ENST00000477757 SPATA31D4Q6ZUB0 917 aa22.69■■□□□ 1.22
PDLIM1-202ENST00000477757 ANO5Q75V66 913 aa22.69■■□□□ 1.22
PDLIM1-202ENST00000477757 PHKBQ93100 1093 aa22.69■■□□□ 1.22
PDLIM1-202ENST00000477757 PRKD2Q9BZL6 878 aa22.69■■□□□ 1.22
PDLIM1-202ENST00000477757 UBN1Q9NPG3 1134 aa22.69■■□□□ 1.22
PDLIM1-202ENST00000477757 NCDNQ9UBB6 729 aa22.69■■□□□ 1.22
PDLIM1-202ENST00000477757 FBXO4Q9UKT5 387 aa22.69■■□□□ 1.22
PDLIM1-202ENST00000477757 COL4A3BPQ9Y5P4 624 aa22.69■■□□□ 1.22
PDLIM1-202ENST00000477757 TGM5O43548 720 aa22.68■■□□□ 1.22
PDLIM1-202ENST00000477757 OR1G1P47890 313 aa22.68■■□□□ 1.22
PDLIM1-202ENST00000477757 VARS2Q5ST30 1063 aaKnown RBP22.68■■□□□ 1.22
PDLIM1-202ENST00000477757 GPR161Q8N6U8 529 aaKnown RBP22.68■■□□□ 1.22
PDLIM1-202ENST00000477757 CCDC148Q8NFR7 591 aa22.68■■□□□ 1.22
PDLIM1-202ENST00000477757 DDX23Q9BUQ8 820 aaKnown RBP22.68■■□□□ 1.22
PDLIM1-202ENST00000477757 MINDY3Q9H8M7 445 aa22.68■■□□□ 1.22
PDLIM1-202ENST00000477757 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.68■■□□□ 1.22
PDLIM1-202ENST00000477757 CHST7Q9NS84 486 aa22.68■■□□□ 1.22
PDLIM1-202ENST00000477757 PCDHGA2Q9Y5H1 932 aa22.68■■□□□ 1.22
PDLIM1-202ENST00000477757 MYH15Q9Y2K3 1946 aa22.68■■□□□ 1.22
PDLIM1-202ENST00000477757 COL4A3Q01955 1670 aa22.68■■□□□ 1.22
PDLIM1-202ENST00000477757 MTCL1Q9Y4B5 1905 aaKnown RBP22.67■■□□□ 1.22
PDLIM1-202ENST00000477757 PRPF3O43395 683 aaKnown RBP22.67■■□□□ 1.22
PDLIM1-202ENST00000477757 PLA2G4FQ68DD2 849 aa22.67■■□□□ 1.22
PDLIM1-202ENST00000477757 SRGAP1Q7Z6B7 1085 aa22.67■■□□□ 1.22
PDLIM1-202ENST00000477757 PALB2Q86YC2 1186 aa22.67■■□□□ 1.22
PDLIM1-202ENST00000477757 GPR65Q8IYL9 337 aa22.67■■□□□ 1.22
PDLIM1-202ENST00000477757 SMG8Q8ND04 991 aaKnown RBP22.67■■□□□ 1.22
PDLIM1-202ENST00000477757 CNNM3Q8NE01 707 aa22.67■■□□□ 1.22
PDLIM1-202ENST00000477757 BCO2Q9BYV7 579 aa22.67■■□□□ 1.22
PDLIM1-202ENST00000477757 SPATA6Q9NWH7 488 aaPredicted RBP22.67■■□□□ 1.22
PDLIM1-202ENST00000477757 NAP1L2Q9ULW6 460 aaPredicted RBP22.67■■□□□ 1.22
PDLIM1-202ENST00000477757 CHD8Q9HCK8 2581 aa22.67■■□□□ 1.22
PDLIM1-202ENST00000477757 KANSL1LA0AUZ9 987 aa22.66■■□□□ 1.22
PDLIM1-202ENST00000477757 DDX11L8A8MPP1 907 aa22.66■■□□□ 1.22
PDLIM1-202ENST00000477757 F8W810 466 aa22.66■■□□□ 1.22
PDLIM1-202ENST00000477757 LAMTOR5O43504 91 aa22.66■■□□□ 1.22
PDLIM1-202ENST00000477757 GAS2O43903 313 aaKnown RBP22.66■■□□□ 1.22
PDLIM1-202ENST00000477757 GPC5P78333 572 aa22.66■■□□□ 1.22
PDLIM1-202ENST00000477757 ADCK5Q3MIX3 580 aa22.66■■□□□ 1.22
PDLIM1-202ENST00000477757 Q4G0T1 1027 aa22.66■■□□□ 1.22
PDLIM1-202ENST00000477757 LILRA6Q6PI73 481 aa22.66■■□□□ 1.22
PDLIM1-202ENST00000477757 SLC7A3Q8WY07 619 aa22.66■■□□□ 1.22
PDLIM1-202ENST00000477757 FGF14Q92915 247 aa22.66■■□□□ 1.22
PDLIM1-202ENST00000477757 FNIP2Q9P278 1114 aa22.66■■□□□ 1.22
PDLIM1-202ENST00000477757 ARL5CA6NH57 179 aa22.65■■□□□ 1.22
PDLIM1-202ENST00000477757 ITGA4P13612 1032 aa22.65■■□□□ 1.22
PDLIM1-202ENST00000477757 MLH1P40692 756 aa22.65■■□□□ 1.22
PDLIM1-202ENST00000477757 CREMQ03060 361 aa22.65■■□□□ 1.22
PDLIM1-202ENST00000477757 TSGA10IPQ3SY00 556 aa22.65■■□□□ 1.22
PDLIM1-202ENST00000477757 ST13P5Q8NFI4 369 aaPredicted RBP22.65■■□□□ 1.22
PDLIM1-202ENST00000477757 RPP25Q9BUL9 199 aaKnown RBP22.65■■□□□ 1.22
PDLIM1-202ENST00000477757 IPPQ9Y573 584 aa22.65■■□□□ 1.22
PDLIM1-202ENST00000477757 ZMYND10O75800 440 aa22.64■■□□□ 1.21
PDLIM1-202ENST00000477757 FSHRP23945 695 aa22.64■■□□□ 1.21
PDLIM1-202ENST00000477757 SCNN1GP51170 649 aa22.64■■□□□ 1.21
PDLIM1-202ENST00000477757 ATXN1P54253 815 aaKnown RBP22.64■■□□□ 1.21
PDLIM1-202ENST00000477757 PSMC5P62195 406 aa22.64■■□□□ 1.21
PDLIM1-202ENST00000477757 LMNB2Q03252 620 aa22.64■■□□□ 1.21
PDLIM1-202ENST00000477757 PRKCQQ04759 706 aa22.64■■□□□ 1.21
PDLIM1-202ENST00000477757 MLF2Q15773 248 aaPredicted RBP22.64■■□□□ 1.21
PDLIM1-202ENST00000477757 PARM1Q6UWI2 310 aa22.64■■□□□ 1.21
PDLIM1-202ENST00000477757 PRPF31Q8WWY3 499 aaKnown RBP22.64■■□□□ 1.21
PDLIM1-202ENST00000477757 PSPC1Q8WXF1 523 aaKnown RBP22.64■■□□□ 1.21
PDLIM1-202ENST00000477757 B3GALT6Q96L58 329 aa22.64■■□□□ 1.21
PDLIM1-202ENST00000477757 MBOAT7Q96N66 472 aa22.64■■□□□ 1.21
PDLIM1-202ENST00000477757 GAD1Q99259 594 aa22.64■■□□□ 1.21
PDLIM1-202ENST00000477757 OSBPL6Q9BZF3 934 aa22.64■■□□□ 1.21
PDLIM1-202ENST00000477757 EPC1Q9H2F5 836 aa22.64■■□□□ 1.21
PDLIM1-202ENST00000477757 CDH7Q9ULB5 785 aa22.64■■□□□ 1.21
PDLIM1-202ENST00000477757 SMG5Q9UPR3 1016 aaKnown RBP22.64■■□□□ 1.21
PDLIM1-202ENST00000477757 MAP1BP46821 2468 aaKnown RBP22.64■■□□□ 1.21
PDLIM1-202ENST00000477757 NR1I2O75469 434 aa22.63■■□□□ 1.21
PDLIM1-202ENST00000477757 TDP2O95551 362 aa22.63■■□□□ 1.21
PDLIM1-202ENST00000477757 MAGEA9P43362 315 aa22.63■■□□□ 1.21
PDLIM1-202ENST00000477757 SNW1Q13573 536 aaKnown RBP22.63■■□□□ 1.21
PDLIM1-202ENST00000477757 USP41Q3LFD5 358 aa22.63■■□□□ 1.21
PDLIM1-202ENST00000477757 FUT10Q6P4F1 479 aa22.63■■□□□ 1.21
PDLIM1-202ENST00000477757 MTSS1LQ765P7 747 aa22.63■■□□□ 1.21
PDLIM1-202ENST00000477757 RASEFQ8IZ41 740 aa22.63■■□□□ 1.21
PDLIM1-202ENST00000477757 ZBTB44Q8NCP5 570 aa22.63■■□□□ 1.21
PDLIM1-202ENST00000477757 ETNPPLQ8TBG4 499 aa22.63■■□□□ 1.21
PDLIM1-202ENST00000477757 TBCKQ8TEA7 893 aa22.63■■□□□ 1.21
PDLIM1-202ENST00000477757 ZFP42Q96MM3 310 aa22.63■■□□□ 1.21
PDLIM1-202ENST00000477757 EIF2AQ9BY44 585 aaKnown RBP22.63■■□□□ 1.21
PDLIM1-202ENST00000477757 GPR62Q9BZJ7 368 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms