RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 UPK3BL1B0FP48 263 aa5.55□□□□□ -1.52
CKS1B-207ENST00000477676 UPK3BL2E5RIL1 263 aa5.55□□□□□ -1.52
CKS1B-207ENST00000477676 SEPT4O43236 478 aa5.55□□□□□ -1.52
CKS1B-207ENST00000477676 LRRN2O75325 713 aa5.55□□□□□ -1.52
CKS1B-207ENST00000477676 IDH1O75874 414 aaKnown RBP5.55□□□□□ -1.52
CKS1B-207ENST00000477676 ERCC3P19447 782 aa5.55□□□□□ -1.52
CKS1B-207ENST00000477676 RPL10P27635 214 aaKnown RBP5.55□□□□□ -1.52
CKS1B-207ENST00000477676 GBP2P32456 591 aaPredicted RBP5.55□□□□□ -1.52
CKS1B-207ENST00000477676 CDR1P51861 262 aa5.55□□□□□ -1.52
CKS1B-207ENST00000477676 CCNA1P78396 465 aa5.55□□□□□ -1.52
CKS1B-207ENST00000477676 DAB2P98082 770 aa5.55□□□□□ -1.52
CKS1B-207ENST00000477676 ATP8B2P98198 1209 aa5.55□□□□□ -1.52
CKS1B-207ENST00000477676 TMEM62Q0P6H9 643 aa5.55□□□□□ -1.52
CKS1B-207ENST00000477676 ABCB5Q2M3G0 1257 aa5.55□□□□□ -1.52
CKS1B-207ENST00000477676 SNAP47Q5SQN1 464 aa5.55□□□□□ -1.52
CKS1B-207ENST00000477676 CCAR1Q8IX12 1150 aaKnown RBP5.55□□□□□ -1.52
CKS1B-207ENST00000477676 MZB1Q8WU39 189 aa5.55□□□□□ -1.52
CKS1B-207ENST00000477676 ATG4CQ96DT6 458 aa5.55□□□□□ -1.52
CKS1B-207ENST00000477676 MAML3Q96JK9 1138 aa5.55□□□□□ -1.52
CKS1B-207ENST00000477676 FEZ1Q99689 392 aa5.55□□□□□ -1.52
CKS1B-207ENST00000477676 LBHD1Q9BQE6 289 aaPredicted RBP5.55□□□□□ -1.52
CKS1B-207ENST00000477676 NOL10Q9BSC4 688 aaKnown RBP5.55□□□□□ -1.52
CKS1B-207ENST00000477676 G6PC3Q9BUM1 346 aa5.55□□□□□ -1.52
CKS1B-207ENST00000477676 SPATC1LQ9H0A9 340 aa5.55□□□□□ -1.52
CKS1B-207ENST00000477676 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.55□□□□□ -1.52
CKS1B-207ENST00000477676 FBXO28Q9NVF7 368 aa5.55□□□□□ -1.52
CKS1B-207ENST00000477676 REV1Q9UBZ9 1251 aa5.55□□□□□ -1.52
CKS1B-207ENST00000477676 HDAC5Q9UQL6 1122 aa5.55□□□□□ -1.52
CKS1B-207ENST00000477676 ZNF281Q9Y2X9 895 aa5.55□□□□□ -1.52
CKS1B-207ENST00000477676 MYO7AQ13402 2215 aa5.55□□□□□ -1.52
CKS1B-207ENST00000477676 MUC6Q6W4X9 2439 aa5.55□□□□□ -1.52
CKS1B-207ENST00000477676 USP34Q70CQ2 3546 aa5.54□□□□□ -1.52
CKS1B-207ENST00000477676 CYP2D7A0A087X1C5 515 aa5.54□□□□□ -1.52
CKS1B-207ENST00000477676 ADCY6O43306 1168 aa5.54□□□□□ -1.52
CKS1B-207ENST00000477676 SORBS3O60504 671 aa5.54□□□□□ -1.52
CKS1B-207ENST00000477676 MSCO60682 206 aa5.54□□□□□ -1.52
CKS1B-207ENST00000477676 SURF6O75683 361 aaKnown RBP5.54□□□□□ -1.52
CKS1B-207ENST00000477676 GLRX3O76003 335 aaKnown RBP5.54□□□□□ -1.52
CKS1B-207ENST00000477676 PGK1P00558 417 aa5.54□□□□□ -1.52
CKS1B-207ENST00000477676 HLA-DOAP06340 250 aa5.54□□□□□ -1.52
CKS1B-207ENST00000477676 AKR1B1P15121 316 aa5.54□□□□□ -1.52
CKS1B-207ENST00000477676 SDHBP21912 280 aa5.54□□□□□ -1.52
CKS1B-207ENST00000477676 ARL4AP40617 200 aa5.54□□□□□ -1.52
CKS1B-207ENST00000477676 KIR2DL1P43626 348 aaPredicted RBP5.54□□□□□ -1.52
CKS1B-207ENST00000477676 KIR2DL2P43627 348 aaPredicted RBP5.54□□□□□ -1.52
CKS1B-207ENST00000477676 USP14P54578 494 aa5.54□□□□□ -1.52
CKS1B-207ENST00000477676 YBX1P67809 324 aaKnown RBP5.54□□□□□ -1.52
CKS1B-207ENST00000477676 SMAD3P84022 425 aaKnown RBP5.54□□□□□ -1.52
CKS1B-207ENST00000477676 MPP2Q14168 576 aa5.54□□□□□ -1.52
CKS1B-207ENST00000477676 COG2Q14746 738 aa5.54□□□□□ -1.52
CKS1B-207ENST00000477676 TMEM132BQ14DG7 1078 aa5.54□□□□□ -1.52
CKS1B-207ENST00000477676 CCDC158Q5M9N0 1113 aa5.54□□□□□ -1.52
CKS1B-207ENST00000477676 C16orf59Q7L2K0 433 aa5.54□□□□□ -1.52
CKS1B-207ENST00000477676 DPP9Q86TI2 863 aa5.54□□□□□ -1.52
CKS1B-207ENST00000477676 ZNF655Q8N720 491 aaPredicted RBP5.54□□□□□ -1.52
CKS1B-207ENST00000477676 SHCBP1Q8NEM2 672 aa5.54□□□□□ -1.52
CKS1B-207ENST00000477676 REPS2Q8NFH8 660 aa5.54□□□□□ -1.52
CKS1B-207ENST00000477676 SYTL5Q8TDW5 730 aaPredicted RBP5.54□□□□□ -1.52
CKS1B-207ENST00000477676 SDR42E1Q8WUS8 393 aa5.54□□□□□ -1.52
CKS1B-207ENST00000477676 FRAT1Q92837 279 aaPredicted RBP5.54□□□□□ -1.52
CKS1B-207ENST00000477676 DYNLL2Q96FJ2 89 aa5.54□□□□□ -1.52
CKS1B-207ENST00000477676 PWWP2AQ96N64 755 aa5.54□□□□□ -1.52
CKS1B-207ENST00000477676 TMEM74Q96NL1 305 aa5.54□□□□□ -1.52
CKS1B-207ENST00000477676 ADAMTS5Q9UNA0 930 aa5.54□□□□□ -1.52
CKS1B-207ENST00000477676 CORINQ9Y5Q5 1042 aa5.54□□□□□ -1.52
CKS1B-207ENST00000477676 MYADML2A6NDP7 307 aa5.53□□□□□ -1.52
CKS1B-207ENST00000477676 GRXCR1A8MXD5 290 aa5.53□□□□□ -1.52
CKS1B-207ENST00000477676 KIAA0355O15063 1070 aa5.53□□□□□ -1.52
CKS1B-207ENST00000477676 PRKAB2O43741 272 aa5.53□□□□□ -1.52
CKS1B-207ENST00000477676 STRNO43815 780 aa5.53□□□□□ -1.52
CKS1B-207ENST00000477676 HTR3BO95264 441 aa5.53□□□□□ -1.52
CKS1B-207ENST00000477676 PF4P02776 101 aa5.53□□□□□ -1.52
CKS1B-207ENST00000477676 PGK2P07205 417 aa5.53□□□□□ -1.52
CKS1B-207ENST00000477676 RAG1P15918 1043 aa5.53□□□□□ -1.52
CKS1B-207ENST00000477676 PDE6AP16499 860 aa5.53□□□□□ -1.52
CKS1B-207ENST00000477676 ZXDAP98168 799 aa5.53□□□□□ -1.52
CKS1B-207ENST00000477676 NMIQ13287 307 aaPredicted RBP5.53□□□□□ -1.52
CKS1B-207ENST00000477676 CCSAPQ6IQ19 270 aaPredicted RBP5.53□□□□□ -1.52
CKS1B-207ENST00000477676 BNC2Q6ZN30 1099 aaPredicted RBP5.53□□□□□ -1.52
CKS1B-207ENST00000477676 SPICE1Q8N0Z3 855 aa5.53□□□□□ -1.52
CKS1B-207ENST00000477676 LCORLQ8N3X6 602 aa5.53□□□□□ -1.52
CKS1B-207ENST00000477676 DAGLBQ8NCG7 672 aa5.53□□□□□ -1.52
CKS1B-207ENST00000477676 ARRDC4Q8NCT1 418 aa5.53□□□□□ -1.52
CKS1B-207ENST00000477676 VWCEQ96DN2 955 aa5.53□□□□□ -1.52
CKS1B-207ENST00000477676 FGD4Q96M96 766 aa5.53□□□□□ -1.52
CKS1B-207ENST00000477676 RSRP1Q9BUV0 290 aa5.53□□□□□ -1.52
CKS1B-207ENST00000477676 TANGO6Q9C0B7 1094 aa5.53□□□□□ -1.52
CKS1B-207ENST00000477676 CRTAC1Q9NQ79 661 aa5.53□□□□□ -1.52
CKS1B-207ENST00000477676 HOXC10Q9NYD6 342 aa5.53□□□□□ -1.52
CKS1B-207ENST00000477676 EXOC6BQ9Y2D4 811 aa5.53□□□□□ -1.52
CKS1B-207ENST00000477676 ZNF532Q9HCE3 1301 aa5.52□□□□□ -1.53
CKS1B-207ENST00000477676 DMDP11532 3685 aa5.52□□□□□ -1.53
CKS1B-207ENST00000477676 CFAP54Q96N23 3096 aa5.52□□□□□ -1.53
CKS1B-207ENST00000477676 VPS13AQ96RL7 3174 aa5.52□□□□□ -1.53
CKS1B-207ENST00000477676 A0A1W2PQ45 241 aaPredicted RBP5.52□□□□□ -1.53
CKS1B-207ENST00000477676 A0A1W2PQY0 241 aa5.52□□□□□ -1.53
CKS1B-207ENST00000477676 FAM221AA4D161 298 aa5.52□□□□□ -1.53
CKS1B-207ENST00000477676 KBTBD13C9JR72 458 aa5.52□□□□□ -1.53
CKS1B-207ENST00000477676 CTAGE5O15320 804 aa5.52□□□□□ -1.53
CKS1B-207ENST00000477676 PQBP1O60828 265 aaKnown RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms