RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 SCNN1GP51170 649 aa7.46□□□□□ -1.22
RTFDC1-206ENST00000477485 SSRP1Q08945 709 aaKnown RBP7.46□□□□□ -1.22
RTFDC1-206ENST00000477485 NCBP1Q09161 790 aaKnown RBP7.46□□□□□ -1.22
RTFDC1-206ENST00000477485 LAMTOR4Q0VGL1 99 aa7.46□□□□□ -1.22
RTFDC1-206ENST00000477485 Q4G0T1 1027 aa7.46□□□□□ -1.22
RTFDC1-206ENST00000477485 DCLRE1AQ6PJP8 1040 aa7.46□□□□□ -1.22
RTFDC1-206ENST00000477485 ANO5Q75V66 913 aa7.46□□□□□ -1.22
RTFDC1-206ENST00000477485 TAS1R1Q7RTX1 841 aa7.46□□□□□ -1.22
RTFDC1-206ENST00000477485 IFNLR1Q8IU57 520 aaPredicted RBP7.46□□□□□ -1.22
RTFDC1-206ENST00000477485 BLIDQ8IZY5 108 aa7.46□□□□□ -1.22
RTFDC1-206ENST00000477485 SLC44A3Q8N4M1 653 aa7.46□□□□□ -1.22
RTFDC1-206ENST00000477485 RNF149Q8NC42 400 aa7.46□□□□□ -1.22
RTFDC1-206ENST00000477485 PRPF31Q8WWY3 499 aaKnown RBP7.46□□□□□ -1.22
RTFDC1-206ENST00000477485 RABGGTAQ92696 567 aa7.46□□□□□ -1.22
RTFDC1-206ENST00000477485 RMDN1Q96DB5 314 aa7.46□□□□□ -1.22
RTFDC1-206ENST00000477485 CCDC43Q96MW1 224 aaKnown RBP7.46□□□□□ -1.22
RTFDC1-206ENST00000477485 RPS6KC1Q96S38 1066 aa7.46□□□□□ -1.22
RTFDC1-206ENST00000477485 GAD1Q99259 594 aa7.46□□□□□ -1.22
RTFDC1-206ENST00000477485 TRAIPQ9BWF2 469 aa7.46□□□□□ -1.22
RTFDC1-206ENST00000477485 C22orf23Q9BZE7 217 aa7.46□□□□□ -1.22
RTFDC1-206ENST00000477485 FOXQ1Q9C009 403 aa7.46□□□□□ -1.22
RTFDC1-206ENST00000477485 MINDY3Q9H8M7 445 aa7.46□□□□□ -1.22
RTFDC1-206ENST00000477485 IFT122Q9HBG6 1241 aa7.46□□□□□ -1.22
RTFDC1-206ENST00000477485 WDR6Q9NNW5 1121 aaKnown RBP7.46□□□□□ -1.22
RTFDC1-206ENST00000477485 MARCH5Q9NX47 278 aa7.46□□□□□ -1.22
RTFDC1-206ENST00000477485 NCDNQ9UBB6 729 aa7.46□□□□□ -1.22
RTFDC1-206ENST00000477485 WNT16Q9UBV4 365 aa7.46□□□□□ -1.22
RTFDC1-206ENST00000477485 DDX25Q9UHL0 483 aaKnown RBP7.46□□□□□ -1.22
RTFDC1-206ENST00000477485 PCDHA4Q9UN74 947 aa7.46□□□□□ -1.22
RTFDC1-206ENST00000477485 HES2Q9Y543 173 aa7.46□□□□□ -1.22
RTFDC1-206ENST00000477485 PDCD11Q14690 1871 aaKnown RBP7.46□□□□□ -1.22
RTFDC1-206ENST00000477485 ZNF292O60281 2723 aa7.46□□□□□ -1.22
RTFDC1-206ENST00000477485 VWA8A3KMH1 1905 aa7.46□□□□□ -1.22
RTFDC1-206ENST00000477485 WDR87Q6ZQQ6 2873 aa7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 IGKV6-21A0A0C4DH24 114 aa7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 CCDC194A0A1B0GVG4 234 aa7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 ARL5CA6NH57 179 aa7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 INO80B-WBP1J3KQ70 363 aa7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 GAS2O43903 313 aaKnown RBP7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 KINO60870 393 aaKnown RBP7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 CDC45O75419 566 aa7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 STBD1O95210 358 aa7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 SP9P0CG40 484 aa7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 LAMP2P13473 410 aa7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 QARSP47897 775 aaKnown RBP7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 STK3Q13188 491 aa7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 UBXN2BQ14CS0 331 aa7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 EMC2Q15006 297 aa7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 TMEM132AQ24JP5 1023 aa7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 INF2Q27J81 1249 aa7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 XKR9Q5GH70 373 aa7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 BMP2KLQ5H9B9 411 aa7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 LIN9Q5TKA1 542 aa7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 NCAPH2Q6IBW4 605 aa7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 SRGAP1Q7Z6B7 1085 aa7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 CEP57Q86XR8 500 aa7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 COLGALT2Q8IYK4 626 aa7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 HACE1Q8IYU2 909 aa7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 DCLK2Q8N568 766 aa7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 ZNF579Q8NAF0 562 aaKnown RBP7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 CNNM3Q8NE01 707 aa7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 CMASQ8NFW8 434 aaPredicted RBP7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 HASPINQ8TF76 798 aa7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 TCP11Q8WWU5 503 aa7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 ZFP42Q96MM3 310 aa7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 MTRQ99707 1265 aa7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 COLEC11Q9BWP8 271 aa7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 EIF2AQ9BY44 585 aaKnown RBP7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 SEMA4AQ9H3S1 761 aa7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 UBN1Q9NPG3 1134 aa7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 SH3GLB2Q9NR46 395 aa7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 SPATA6Q9NWH7 488 aaPredicted RBP7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 KLK14Q9P0G3 267 aa7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 IPPQ9Y573 584 aa7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 NUMBLQ9Y6R0 609 aa7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 CACNA1IQ9P0X4 2223 aa7.45□□□□□ -1.22
RTFDC1-206ENST00000477485 EP300Q09472 2414 aaPredicted RBP7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 TICRRQ7Z2Z1 1910 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 EML1O00423 815 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 LAMTOR5O43504 91 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 TGM5O43548 720 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 SLC37A4O43826 429 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 EDIL3O43854 480 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 CCNT1O60563 726 aaKnown RBP7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 LILRB3O75022 631 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 LRRN2O75325 713 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 TADA2AO75478 443 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 DEXIO95424 95 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 NPTXRO95502 500 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 IFNAR1P17181 557 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 NCLP19338 710 aaKnown RBP7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 RPS6KB1P23443 525 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 FSHRP23945 695 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 AKAP5P24588 427 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 YWHABP31946 246 aaKnown RBP7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 RFC5P40937 340 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 DSG1Q02413 1049 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 CYP4A11Q02928 519 aa7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 SNW1Q13573 536 aaKnown RBP7.44□□□□□ -1.22
RTFDC1-206ENST00000477485 TFDP1Q14186 410 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms