RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 HOXA11P31270 313 aaPredicted RBP12.76□□□□□ -0.37
BRCA1-213ENST00000476777 ADD1P35611 737 aaKnown RBP12.76□□□□□ -0.37
BRCA1-213ENST00000476777 GLUD2P49448 558 aa12.76□□□□□ -0.37
BRCA1-213ENST00000476777 STARD6P59095 220 aa12.76□□□□□ -0.37
BRCA1-213ENST00000476777 UBXN11Q5T124 520 aa12.76□□□□□ -0.37
BRCA1-213ENST00000476777 LRCH2Q5VUJ6 765 aa12.76□□□□□ -0.37
BRCA1-213ENST00000476777 SPATA31D4Q6ZUB0 917 aa12.76□□□□□ -0.37
BRCA1-213ENST00000476777 DHX32Q7L7V1 743 aaKnown RBP12.76□□□□□ -0.37
BRCA1-213ENST00000476777 COLGALT2Q8IYK4 626 aa12.76□□□□□ -0.37
BRCA1-213ENST00000476777 ST13P5Q8NFI4 369 aaPredicted RBP12.76□□□□□ -0.37
BRCA1-213ENST00000476777 RDM1Q8NG50 284 aa12.76□□□□□ -0.37
BRCA1-213ENST00000476777 CCDC12Q8WUD4 166 aaPredicted RBP12.76□□□□□ -0.37
BRCA1-213ENST00000476777 HDAC7Q8WUI4 952 aa12.76□□□□□ -0.37
BRCA1-213ENST00000476777 CCDC136Q96JN2 1154 aa12.76□□□□□ -0.37
BRCA1-213ENST00000476777 NLRP4Q96MN2 994 aa12.76□□□□□ -0.37
BRCA1-213ENST00000476777 TEKT3Q9BXF9 490 aa12.76□□□□□ -0.37
BRCA1-213ENST00000476777 NT5C3AQ9H0P0 336 aa12.76□□□□□ -0.37
BRCA1-213ENST00000476777 PRG3Q9Y2Y8 225 aaPredicted RBP12.76□□□□□ -0.37
BRCA1-213ENST00000476777 NUMBLQ9Y6R0 609 aa12.76□□□□□ -0.37
BRCA1-213ENST00000476777 KINO60870 393 aaKnown RBP12.75□□□□□ -0.37
BRCA1-213ENST00000476777 PSMD10O75832 226 aa12.75□□□□□ -0.37
BRCA1-213ENST00000476777 C1RP00736 705 aa12.75□□□□□ -0.37
BRCA1-213ENST00000476777 USP11P51784 963 aa12.75□□□□□ -0.37
BRCA1-213ENST00000476777 DSG1Q02413 1049 aa12.75□□□□□ -0.37
BRCA1-213ENST00000476777 MIA3Q5JRA6 1907 aa12.75□□□□□ -0.37
BRCA1-213ENST00000476777 B3GNT9Q6UX72 402 aa12.75□□□□□ -0.37
BRCA1-213ENST00000476777 GET4Q7L5D6 327 aaPredicted RBP12.75□□□□□ -0.37
BRCA1-213ENST00000476777 MIER3Q7Z3K6 550 aa12.75□□□□□ -0.37
BRCA1-213ENST00000476777 RPP25Q9BUL9 199 aaKnown RBP12.75□□□□□ -0.37
BRCA1-213ENST00000476777 PLEKHA4Q9H4M7 779 aa12.75□□□□□ -0.37
BRCA1-213ENST00000476777 MINDY3Q9H8M7 445 aa12.75□□□□□ -0.37
BRCA1-213ENST00000476777 ANO2Q9NQ90 1003 aa12.75□□□□□ -0.37
BRCA1-213ENST00000476777 ZDHHC7Q9NXF8 308 aa12.75□□□□□ -0.37
BRCA1-213ENST00000476777 FAM208BQ5VWN6 2430 aa12.74□□□□□ -0.37
BRCA1-213ENST00000476777 DDX11L8A8MPP1 907 aa12.74□□□□□ -0.37
BRCA1-213ENST00000476777 F8W810 466 aa12.74□□□□□ -0.37
BRCA1-213ENST00000476777 TGM5O43548 720 aa12.74□□□□□ -0.37
BRCA1-213ENST00000476777 GAS2O43903 313 aaKnown RBP12.74□□□□□ -0.37
BRCA1-213ENST00000476777 NCLP19338 710 aaKnown RBP12.74□□□□□ -0.37
BRCA1-213ENST00000476777 OR1G1P47890 313 aa12.74□□□□□ -0.37
BRCA1-213ENST00000476777 GPC5P78333 572 aa12.74□□□□□ -0.37
BRCA1-213ENST00000476777 DSC1Q08554 894 aa12.74□□□□□ -0.37
BRCA1-213ENST00000476777 ZNF528Q3MIS6 628 aa12.74□□□□□ -0.37
BRCA1-213ENST00000476777 VARS2Q5ST30 1063 aaKnown RBP12.74□□□□□ -0.37
BRCA1-213ENST00000476777 ANO5Q75V66 913 aa12.74□□□□□ -0.37
BRCA1-213ENST00000476777 PALB2Q86YC2 1186 aa12.74□□□□□ -0.37
BRCA1-213ENST00000476777 SMG8Q8ND04 991 aaKnown RBP12.74□□□□□ -0.37
BRCA1-213ENST00000476777 BICD2Q8TD16 824 aa12.74□□□□□ -0.37
BRCA1-213ENST00000476777 BORCS6Q96GS4 357 aa12.74□□□□□ -0.37
BRCA1-213ENST00000476777 SHDQ96IW2 340 aa12.74□□□□□ -0.37
BRCA1-213ENST00000476777 DDX23Q9BUQ8 820 aaKnown RBP12.74□□□□□ -0.37
BRCA1-213ENST00000476777 PRKD2Q9BZL6 878 aa12.74□□□□□ -0.37
BRCA1-213ENST00000476777 PIDD1Q9HB75 910 aa12.74□□□□□ -0.37
BRCA1-213ENST00000476777 CHST7Q9NS84 486 aa12.74□□□□□ -0.37
BRCA1-213ENST00000476777 COL4A3BPQ9Y5P4 624 aa12.74□□□□□ -0.37
BRCA1-213ENST00000476777 MYH15Q9Y2K3 1946 aa12.74□□□□□ -0.37
BRCA1-213ENST00000476777 BAHCC1Q9P281 2608 aa12.73□□□□□ -0.37
BRCA1-213ENST00000476777 CCDC196A0A1B0GTZ2 297 aa12.73□□□□□ -0.37
BRCA1-213ENST00000476777 SPTLC1O15269 473 aa12.73□□□□□ -0.37
BRCA1-213ENST00000476777 PRPF3O43395 683 aaKnown RBP12.73□□□□□ -0.37
BRCA1-213ENST00000476777 ATXN1P54253 815 aaKnown RBP12.73□□□□□ -0.37
BRCA1-213ENST00000476777 SNW1Q13573 536 aaKnown RBP12.73□□□□□ -0.37
BRCA1-213ENST00000476777 ADCK5Q3MIX3 580 aa12.73□□□□□ -0.37
BRCA1-213ENST00000476777 TSGA10IPQ3SY00 556 aa12.73□□□□□ -0.37
BRCA1-213ENST00000476777 Q4G0T1 1027 aa12.73□□□□□ -0.37
BRCA1-213ENST00000476777 RNF20Q5VTR2 975 aa12.73□□□□□ -0.37
BRCA1-213ENST00000476777 PLA2G4FQ68DD2 849 aa12.73□□□□□ -0.37
BRCA1-213ENST00000476777 LILRA6Q6PI73 481 aa12.73□□□□□ -0.37
BRCA1-213ENST00000476777 SRGAP1Q7Z6B7 1085 aa12.73□□□□□ -0.37
BRCA1-213ENST00000476777 RASEFQ8IZ41 740 aa12.73□□□□□ -0.37
BRCA1-213ENST00000476777 FGF14Q92915 247 aa12.73□□□□□ -0.37
BRCA1-213ENST00000476777 PHKBQ93100 1093 aa12.73□□□□□ -0.37
BRCA1-213ENST00000476777 B3GALT6Q96L58 329 aa12.73□□□□□ -0.37
BRCA1-213ENST00000476777 GAD1Q99259 594 aa12.73□□□□□ -0.37
BRCA1-213ENST00000476777 JPH2Q9BR39 696 aaPredicted RBP12.73□□□□□ -0.37
BRCA1-213ENST00000476777 UBN1Q9NPG3 1134 aa12.73□□□□□ -0.37
BRCA1-213ENST00000476777 SPATA6Q9NWH7 488 aaPredicted RBP12.73□□□□□ -0.37
BRCA1-213ENST00000476777 FBXO4Q9UKT5 387 aa12.73□□□□□ -0.37
BRCA1-213ENST00000476777 ZFP37Q9Y6Q3 630 aaPredicted RBP12.73□□□□□ -0.37
BRCA1-213ENST00000476777 SDK1Q7Z5N4 2213 aa12.73□□□□□ -0.37
BRCA1-213ENST00000476777 KANSL1LA0AUZ9 987 aa12.72□□□□□ -0.37
BRCA1-213ENST00000476777 ARL5CA6NH57 179 aa12.72□□□□□ -0.37
BRCA1-213ENST00000476777 GABBR2O75899 941 aa12.72□□□□□ -0.37
BRCA1-213ENST00000476777 SRGAP2CP0DJJ0 459 aa12.72□□□□□ -0.37
BRCA1-213ENST00000476777 ITGA4P13612 1032 aa12.72□□□□□ -0.37
BRCA1-213ENST00000476777 SDHBP21912 280 aa12.72□□□□□ -0.37
BRCA1-213ENST00000476777 FSHRP23945 695 aa12.72□□□□□ -0.37
BRCA1-213ENST00000476777 PSMC5P62195 406 aa12.72□□□□□ -0.37
BRCA1-213ENST00000476777 PARM1Q6UWI2 310 aa12.72□□□□□ -0.37
BRCA1-213ENST00000476777 GPR65Q8IYL9 337 aa12.72□□□□□ -0.37
BRCA1-213ENST00000476777 GPR161Q8N6U8 529 aaKnown RBP12.72□□□□□ -0.37
BRCA1-213ENST00000476777 PRPF31Q8WWY3 499 aaKnown RBP12.72□□□□□ -0.37
BRCA1-213ENST00000476777 BCO2Q9BYV7 579 aa12.72□□□□□ -0.37
BRCA1-213ENST00000476777 GPR62Q9BZJ7 368 aa12.72□□□□□ -0.37
BRCA1-213ENST00000476777 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.72□□□□□ -0.37
BRCA1-213ENST00000476777 MIOSQ9NXC5 875 aa12.72□□□□□ -0.37
BRCA1-213ENST00000476777 FNIP2Q9P278 1114 aa12.72□□□□□ -0.37
BRCA1-213ENST00000476777 NCDNQ9UBB6 729 aa12.72□□□□□ -0.37
BRCA1-213ENST00000476777 NAP1L2Q9ULW6 460 aaPredicted RBP12.72□□□□□ -0.37
BRCA1-213ENST00000476777 MTF2Q9Y483 593 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms