RNA–Protein interactions for RNA: ENST00000476045.5

VPS13D-206, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-206ENST00000476045 NOL8Q76FK4 1167 aaKnown RBP4.88□□□□□ -1.63
VPS13D-206ENST00000476045 ARMCX2Q7L311 632 aa4.88□□□□□ -1.63
VPS13D-206ENST00000476045 ANKRD33Q7Z3H0 272 aa4.88□□□□□ -1.63
VPS13D-206ENST00000476045 THAP5Q7Z6K1 395 aa4.88□□□□□ -1.63
VPS13D-206ENST00000476045 LRRC47Q8N1G4 583 aaKnown RBP4.88□□□□□ -1.63
VPS13D-206ENST00000476045 MFSD4AQ8N468 514 aa4.88□□□□□ -1.63
VPS13D-206ENST00000476045 LRRN4CLQ8ND94 238 aa4.88□□□□□ -1.63
VPS13D-206ENST00000476045 DNAJB8Q8NHS0 232 aa4.88□□□□□ -1.63
VPS13D-206ENST00000476045 STAG1Q8WVM7 1258 aa4.88□□□□□ -1.63
VPS13D-206ENST00000476045 RILPL2Q969X0 211 aa4.88□□□□□ -1.63
VPS13D-206ENST00000476045 CHAMP1Q96JM3 812 aa4.88□□□□□ -1.63
VPS13D-206ENST00000476045 GLT1D1Q96MS3 346 aa4.88□□□□□ -1.63
VPS13D-206ENST00000476045 VTA1Q9NP79 307 aa4.88□□□□□ -1.63
VPS13D-206ENST00000476045 STARD7Q9NQZ5 370 aa4.88□□□□□ -1.63
VPS13D-206ENST00000476045 RNF146Q9NTX7 359 aa4.88□□□□□ -1.63
VPS13D-206ENST00000476045 TCP11L1Q9NUJ3 509 aa4.88□□□□□ -1.63
VPS13D-206ENST00000476045 LMCD1Q9NZU5 365 aa4.88□□□□□ -1.63
VPS13D-206ENST00000476045 CLIP2Q9UDT6 1046 aa4.88□□□□□ -1.63
VPS13D-206ENST00000476045 ADD3Q9UEY8 706 aaKnown RBP4.88□□□□□ -1.63
VPS13D-206ENST00000476045 ZHX1Q9UKY1 873 aaPredicted RBP4.88□□□□□ -1.63
VPS13D-206ENST00000476045 ISY1Q9ULR0 285 aaKnown RBP4.88□□□□□ -1.63
VPS13D-206ENST00000476045 STX8Q9UNK0 236 aa4.88□□□□□ -1.63
VPS13D-206ENST00000476045 KAT6AQ92794 2004 aa4.88□□□□□ -1.63
VPS13D-206ENST00000476045 MUC3AQ02505 3323 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 PRR33A8MZF0 331 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 TMEM232C9JQI7 657 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 NKRFO15226 690 aaKnown RBP eCLIP4.87□□□□□ -1.63
VPS13D-206ENST00000476045 PRDM1O75626 825 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 REC8O95072 547 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 ICAM1P05362 532 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 PGK2P07205 417 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 FGRP09769 529 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 TOP1P11387 765 aaKnown RBP4.87□□□□□ -1.63
VPS13D-206ENST00000476045 GARTP22102 1010 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 ADCYAP1R1P41586 468 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 KIR3DL1P43629 444 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 ACLYP53396 1101 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 PDE1AP54750 535 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 GJA9P57773 515 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 ETF1P62495 437 aaKnown RBP4.87□□□□□ -1.63
VPS13D-206ENST00000476045 NUCB2P80303 420 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 TFAP4Q01664 338 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 FPGSQ05932 587 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 PPIGQ13427 754 aaKnown RBP eCLIP4.87□□□□□ -1.63
VPS13D-206ENST00000476045 ACVR2BQ13705 512 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 CCDC96Q2M329 555 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 MCMDC2Q4G0Z9 681 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 BRDTQ58F21 947 aaPredicted RBP4.87□□□□□ -1.63
VPS13D-206ENST00000476045 SFRP5Q5T4F7 317 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 SLC6A19Q695T7 634 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 OGFOD2Q6N063 350 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 LETMD1Q6P1Q0 360 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 BTNL9Q6UXG8 535 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 ERMP1Q7Z2K6 904 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 TLK2Q86UE8 772 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 IQCA1Q86XH1 822 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 MCATQ8IVS2 390 aaKnown RBP4.87□□□□□ -1.63
VPS13D-206ENST00000476045 DEFB123Q8N688 67 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 FAM133AQ8N9E0 248 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 ESR2Q92731 530 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 ACSF2Q96CM8 615 aaPredicted RBP4.87□□□□□ -1.63
VPS13D-206ENST00000476045 TTC14Q96N46 770 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 NAP1L5Q96NT1 182 aaPredicted RBP4.87□□□□□ -1.63
VPS13D-206ENST00000476045 NUP88Q99567 741 aaPredicted RBP4.87□□□□□ -1.63
VPS13D-206ENST00000476045 MIPEPQ99797 713 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 RSRP1Q9BUV0 290 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 KRTAP9-9Q9BYP9 154 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 KRTAP9-4Q9BYQ2 154 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 RANBP17Q9H2T7 1088 aaKnown RBP4.87□□□□□ -1.63
VPS13D-206ENST00000476045 CNNM2Q9H8M5 875 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 RC3H2Q9HBD1 1191 aaKnown RBP4.87□□□□□ -1.63
VPS13D-206ENST00000476045 A1CFQ9NQ94 594 aaKnown RBP4.87□□□□□ -1.63
VPS13D-206ENST00000476045 DIAPH3Q9NSV4 1193 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 CCPG1Q9ULG6 757 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 Q9Y3F1 56 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 DDX49Q9Y6V7 483 aaKnown RBP4.87□□□□□ -1.63
VPS13D-206ENST00000476045 PIEZO1Q92508 2521 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 MICAL3Q7RTP6 2002 aa4.87□□□□□ -1.63
VPS13D-206ENST00000476045 MYH7BA7E2Y1 1941 aa4.86□□□□□ -1.63
VPS13D-206ENST00000476045 TRIP12Q14669 1992 aaPredicted RBP4.86□□□□□ -1.63
VPS13D-206ENST00000476045 A0A0D9SFI3 127 aa4.86□□□□□ -1.63
VPS13D-206ENST00000476045 BIN1O00499 593 aa4.86□□□□□ -1.63
VPS13D-206ENST00000476045 FOXP2O15409 715 aa4.86□□□□□ -1.63
VPS13D-206ENST00000476045 SORBS3O60504 671 aa4.86□□□□□ -1.63
VPS13D-206ENST00000476045 RANBP6O60518 1105 aaKnown RBP4.86□□□□□ -1.63
VPS13D-206ENST00000476045 PQBP1O60828 265 aaKnown RBP4.86□□□□□ -1.63
VPS13D-206ENST00000476045 PGK1P00558 417 aa4.86□□□□□ -1.63
VPS13D-206ENST00000476045 CHGBP05060 677 aa4.86□□□□□ -1.63
VPS13D-206ENST00000476045 PFKMP08237 780 aa4.86□□□□□ -1.63
VPS13D-206ENST00000476045 C6orf222P0C671 652 aaPredicted RBP4.86□□□□□ -1.63
VPS13D-206ENST00000476045 RAG1P15918 1043 aa4.86□□□□□ -1.63
VPS13D-206ENST00000476045 MCCP23508 829 aa4.86□□□□□ -1.63
VPS13D-206ENST00000476045 CPT1AP50416 773 aa4.86□□□□□ -1.63
VPS13D-206ENST00000476045 NEK4P51957 841 aa4.86□□□□□ -1.63
VPS13D-206ENST00000476045 TLE2Q04725 743 aa4.86□□□□□ -1.63
VPS13D-206ENST00000476045 TRAF1Q13077 416 aa4.86□□□□□ -1.63
VPS13D-206ENST00000476045 PKP1Q13835 747 aa4.86□□□□□ -1.63
VPS13D-206ENST00000476045 MRPL58Q14197 206 aaKnown RBP4.86□□□□□ -1.63
VPS13D-206ENST00000476045 FSCN1Q16658 493 aaKnown RBP4.86□□□□□ -1.63
VPS13D-206ENST00000476045 CCDC144BQ3MJ40 725 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms