RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 PDZD7Q9H5P4 517 aa22.84■■□□□ 1.25
TOP3A-204ENST00000472959 MRPL44Q9H9J2 332 aaKnown RBP22.84■■□□□ 1.25
TOP3A-204ENST00000472959 RC3H2Q9HBD1 1191 aaKnown RBP22.84■■□□□ 1.25
TOP3A-204ENST00000472959 TNFSF13BQ9Y275 285 aa22.84■■□□□ 1.25
TOP3A-204ENST00000472959 PVALEFA0A1B0GWK0 134 aa22.83■■□□□ 1.25
TOP3A-204ENST00000472959 TTLL13PA6NNM8 815 aa22.83■■□□□ 1.25
TOP3A-204ENST00000472959 ATF7P17544 494 aaPredicted RBP22.83■■□□□ 1.25
TOP3A-204ENST00000472959 ZPBP2Q6X784 338 aa22.83■■□□□ 1.25
TOP3A-204ENST00000472959 CMTR2Q8IYT2 770 aaKnown RBP22.83■■□□□ 1.25
TOP3A-204ENST00000472959 HACE1Q8IYU2 909 aa22.83■■□□□ 1.25
TOP3A-204ENST00000472959 FMR1NBQ8N0W7 255 aaPredicted RBP22.83■■□□□ 1.25
TOP3A-204ENST00000472959 RNF169Q8NCN4 708 aa22.83■■□□□ 1.25
TOP3A-204ENST00000472959 HVCN1Q96D96 273 aa22.83■■□□□ 1.25
TOP3A-204ENST00000472959 ACO2Q99798 780 aaKnown RBP22.83■■□□□ 1.25
TOP3A-204ENST00000472959 EIF2AQ9BY44 585 aaKnown RBP22.83■■□□□ 1.25
TOP3A-204ENST00000472959 TBX20Q9UMR3 447 aa22.83■■□□□ 1.25
TOP3A-204ENST00000472959 LCHNA4D1U4 455 aa22.82■■□□□ 1.24
TOP3A-204ENST00000472959 GTPBP6O43824 516 aaPredicted RBP22.82■■□□□ 1.24
TOP3A-204ENST00000472959 EDN1P05305 212 aa22.82■■□□□ 1.24
TOP3A-204ENST00000472959 NMT1P30419 496 aaKnown RBP22.82■■□□□ 1.24
TOP3A-204ENST00000472959 COASYQ13057 564 aa22.82■■□□□ 1.24
TOP3A-204ENST00000472959 CUL4BQ13620 913 aa22.82■■□□□ 1.24
TOP3A-204ENST00000472959 ALCAMQ13740 583 aa22.82■■□□□ 1.24
TOP3A-204ENST00000472959 DCAF4L1Q3SXM0 396 aa22.82■■□□□ 1.24
TOP3A-204ENST00000472959 PPP2R2DQ66LE6 453 aa22.82■■□□□ 1.24
TOP3A-204ENST00000472959 UNC13DQ70J99 1090 aa22.82■■□□□ 1.24
TOP3A-204ENST00000472959 ABI1Q8IZP0 508 aa22.82■■□□□ 1.24
TOP3A-204ENST00000472959 ENGASEQ8NFI3 743 aa22.82■■□□□ 1.24
TOP3A-204ENST00000472959 TARS2Q9BW92 718 aaKnown RBP22.82■■□□□ 1.24
TOP3A-204ENST00000472959 TMEM117Q9H0C3 514 aa22.82■■□□□ 1.24
TOP3A-204ENST00000472959 BLZF1Q9H2G9 400 aa22.82■■□□□ 1.24
TOP3A-204ENST00000472959 UBN1Q9NPG3 1134 aa22.82■■□□□ 1.24
TOP3A-204ENST00000472959 USP20Q9Y2K6 914 aa22.82■■□□□ 1.24
TOP3A-204ENST00000472959 IPPQ9Y573 584 aa22.82■■□□□ 1.24
TOP3A-204ENST00000472959 PCDHB13Q9Y5F0 798 aa22.82■■□□□ 1.24
TOP3A-204ENST00000472959 NPTXRO95502 500 aa22.81■■□□□ 1.24
TOP3A-204ENST00000472959 FGFR1P11362 822 aa22.81■■□□□ 1.24
TOP3A-204ENST00000472959 UBE2HP62256 183 aa22.81■■□□□ 1.24
TOP3A-204ENST00000472959 TAP1Q03518 808 aa22.81■■□□□ 1.24
TOP3A-204ENST00000472959 SNW1Q13573 536 aaKnown RBP22.81■■□□□ 1.24
TOP3A-204ENST00000472959 BTG3Q14201 252 aaPredicted RBP22.81■■□□□ 1.24
TOP3A-204ENST00000472959 ZNF697Q5TEC3 545 aa22.81■■□□□ 1.24
TOP3A-204ENST00000472959 CDR2LQ86X02 465 aaPredicted RBP22.81■■□□□ 1.24
TOP3A-204ENST00000472959 GRAMD1CQ8IYS0 662 aa22.81■■□□□ 1.24
TOP3A-204ENST00000472959 FIBCD1Q8N539 461 aa22.81■■□□□ 1.24
TOP3A-204ENST00000472959 SMG8Q8ND04 991 aaKnown RBP22.81■■□□□ 1.24
TOP3A-204ENST00000472959 STRA6Q9BX79 667 aa22.81■■□□□ 1.24
TOP3A-204ENST00000472959 ZNF576Q9H609 170 aa22.81■■□□□ 1.24
TOP3A-204ENST00000472959 PTPRHQ9HD43 1115 aa22.81■■□□□ 1.24
TOP3A-204ENST00000472959 RNF19AQ9NV58 838 aa22.81■■□□□ 1.24
TOP3A-204ENST00000472959 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.8■■□□□ 1.24
TOP3A-204ENST00000472959 LINC01553A4QN01 128 aa22.8■■□□□ 1.24
TOP3A-204ENST00000472959 TOM1L1O75674 476 aa22.8■■□□□ 1.24
TOP3A-204ENST00000472959 PPP1R37O75864 691 aa22.8■■□□□ 1.24
TOP3A-204ENST00000472959 ITGA4P13612 1032 aa22.8■■□□□ 1.24
TOP3A-204ENST00000472959 EEF1DP3Q658K8 133 aa22.8■■□□□ 1.24
TOP3A-204ENST00000472959 GLB1LQ6UWU2 654 aa22.8■■□□□ 1.24
TOP3A-204ENST00000472959 STXBP4Q6ZWJ1 553 aa22.8■■□□□ 1.24
TOP3A-204ENST00000472959 MAP4K3Q8IVH8 894 aa22.8■■□□□ 1.24
TOP3A-204ENST00000472959 BICD1Q96G01 975 aa22.8■■□□□ 1.24
TOP3A-204ENST00000472959 TIGD1Q96MW7 591 aa22.8■■□□□ 1.24
TOP3A-204ENST00000472959 GBP4Q96PP9 640 aa22.8■■□□□ 1.24
TOP3A-204ENST00000472959 TBC1D7Q9P0N9 293 aa22.8■■□□□ 1.24
TOP3A-204ENST00000472959 COL4A6Q14031 1691 aa22.79■■□□□ 1.24
TOP3A-204ENST00000472959 TBKBP1A7MCY6 615 aa22.79■■□□□ 1.24
TOP3A-204ENST00000472959 GADD45BO75293 160 aaPredicted RBP22.79■■□□□ 1.24
TOP3A-204ENST00000472959 GCNT3O95395 438 aa22.79■■□□□ 1.24
TOP3A-204ENST00000472959 PIGRP01833 764 aa22.79■■□□□ 1.24
TOP3A-204ENST00000472959 PROZP22891 400 aa22.79■■□□□ 1.24
TOP3A-204ENST00000472959 CASP1P29466 404 aa22.79■■□□□ 1.24
TOP3A-204ENST00000472959 GATMP50440 423 aa22.79■■□□□ 1.24
TOP3A-204ENST00000472959 ZC2HC1CQ53FD0 456 aaPredicted RBP22.79■■□□□ 1.24
TOP3A-204ENST00000472959 CLLU1OSQ5K130 101 aa22.79■■□□□ 1.24
TOP3A-204ENST00000472959 LPPQ93052 612 aa22.79■■□□□ 1.24
TOP3A-204ENST00000472959 CASD1Q96PB1 797 aa22.79■■□□□ 1.24
TOP3A-204ENST00000472959 TCHPQ9BT92 498 aa22.79■■□□□ 1.24
TOP3A-204ENST00000472959 PTPRSQ13332 1948 aa22.78■■□□□ 1.24
TOP3A-204ENST00000472959 HNRNPDLO14979 420 aaKnown RBP22.78■■□□□ 1.24
TOP3A-204ENST00000472959 PRPF40AO75400 957 aaKnown RBP22.78■■□□□ 1.24
TOP3A-204ENST00000472959 MCF2P10911 925 aa22.78■■□□□ 1.24
TOP3A-204ENST00000472959 LIG4P49917 911 aa22.78■■□□□ 1.24
TOP3A-204ENST00000472959 EHHADHQ08426 723 aa22.78■■□□□ 1.24
TOP3A-204ENST00000472959 ZNF568Q3ZCX4 644 aa22.78■■□□□ 1.24
TOP3A-204ENST00000472959 FAM26FQ5R3K3 315 aa22.78■■□□□ 1.24
TOP3A-204ENST00000472959 MPZL3Q6UWV2 235 aa22.78■■□□□ 1.24
TOP3A-204ENST00000472959 AGMOQ6ZNB7 445 aa22.78■■□□□ 1.24
TOP3A-204ENST00000472959 HELQQ8TDG4 1101 aa22.78■■□□□ 1.24
TOP3A-204ENST00000472959 SAMD11Q96NU1 681 aa22.78■■□□□ 1.24
TOP3A-204ENST00000472959 TGS1Q96RS0 853 aaKnown RBP22.78■■□□□ 1.24
TOP3A-204ENST00000472959 MRPL9Q9BYD2 267 aaKnown RBP22.78■■□□□ 1.24
TOP3A-204ENST00000472959 SEMA6BQ9H3T3 888 aa22.78■■□□□ 1.24
TOP3A-204ENST00000472959 NXF3Q9H4D5 531 aaKnown RBP22.78■■□□□ 1.24
TOP3A-204ENST00000472959 RSAD1Q9HA92 442 aa22.78■■□□□ 1.24
TOP3A-204ENST00000472959 HOOK1Q9UJC3 728 aaKnown RBP22.78■■□□□ 1.24
TOP3A-204ENST00000472959 EXOC7Q9UPT5 735 aa22.78■■□□□ 1.24
TOP3A-204ENST00000472959 GIT1Q9Y2X7 761 aa22.78■■□□□ 1.24
TOP3A-204ENST00000472959 RWDD3Q9Y3V2 267 aa22.78■■□□□ 1.24
TOP3A-204ENST00000472959 LAMA2P24043 3122 aaKnown RBP22.77■■□□□ 1.24
TOP3A-204ENST00000472959 CLDN3O15551 220 aa22.77■■□□□ 1.24
TOP3A-204ENST00000472959 OFD1O75665 1012 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms