RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 PRPF4BQ13523 1007 aaKnown RBP16.51■□□□□ 0.23
COL4A5-203ENST00000470339 PKN2Q16513 984 aaKnown RBP16.51■□□□□ 0.23
COL4A5-203ENST00000470339 RUFY4Q6ZNE9 571 aa16.51■□□□□ 0.23
COL4A5-203ENST00000470339 CTU1Q7Z7A3 348 aaKnown RBP16.51■□□□□ 0.23
COL4A5-203ENST00000470339 RSPH3Q86UC2 560 aa16.51■□□□□ 0.23
COL4A5-203ENST00000470339 GPD1LQ8N335 351 aa16.51■□□□□ 0.23
COL4A5-203ENST00000470339 IQCDQ96DY2 449 aa16.51■□□□□ 0.23
COL4A5-203ENST00000470339 GLT1D1Q96MS3 346 aa16.51■□□□□ 0.23
COL4A5-203ENST00000470339 FAM49AQ9H0Q0 323 aaPredicted RBP16.51■□□□□ 0.23
COL4A5-203ENST00000470339 PCIF1Q9H4Z3 704 aa16.51■□□□□ 0.23
COL4A5-203ENST00000470339 PHF24Q9UPV7 400 aa16.51■□□□□ 0.23
COL4A5-203ENST00000470339 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.51■□□□□ 0.23
COL4A5-203ENST00000470339 GRIN2DO15399 1336 aa16.5■□□□□ 0.23
COL4A5-203ENST00000470339 PES1O00541 588 aaKnown RBP16.5■□□□□ 0.23
COL4A5-203ENST00000470339 CLDN3O15551 220 aa16.5■□□□□ 0.23
COL4A5-203ENST00000470339 AFPP02771 609 aaKnown RBP16.5■□□□□ 0.23
COL4A5-203ENST00000470339 HSPA8P11142 646 aaKnown RBP16.5■□□□□ 0.23
COL4A5-203ENST00000470339 PROZP22891 400 aa16.5■□□□□ 0.23
COL4A5-203ENST00000470339 CRYBB1P53674 252 aaPredicted RBP16.5■□□□□ 0.23
COL4A5-203ENST00000470339 ZNF200P98182 395 aaPredicted RBP16.5■□□□□ 0.23
COL4A5-203ENST00000470339 KCNH2Q12809 1159 aa16.5■□□□□ 0.23
COL4A5-203ENST00000470339 BFSP1Q12934 665 aa16.5■□□□□ 0.23
COL4A5-203ENST00000470339 ITGA7Q13683 1181 aa16.5■□□□□ 0.23
COL4A5-203ENST00000470339 TRIM14Q14142 442 aa16.5■□□□□ 0.23
COL4A5-203ENST00000470339 SNRNP35Q16560 246 aaKnown RBP16.5■□□□□ 0.23
COL4A5-203ENST00000470339 GDF6Q6KF10 455 aaPredicted RBP16.5■□□□□ 0.23
COL4A5-203ENST00000470339 USP37Q86T82 979 aa16.5■□□□□ 0.23
COL4A5-203ENST00000470339 SERINC5Q86VE9 423 aa16.5■□□□□ 0.23
COL4A5-203ENST00000470339 TMC2Q8TDI7 906 aa16.5■□□□□ 0.23
COL4A5-203ENST00000470339 DNAJB3Q8WWF6 145 aa16.5■□□□□ 0.23
COL4A5-203ENST00000470339 SLC35C1Q96A29 364 aa16.5■□□□□ 0.23
COL4A5-203ENST00000470339 TRIM44Q96DX7 344 aaPredicted RBP16.5■□□□□ 0.23
COL4A5-203ENST00000470339 MFSD14AQ96MC6 490 aa16.5■□□□□ 0.23
COL4A5-203ENST00000470339 NUP58Q9BVL2 599 aa16.5■□□□□ 0.23
COL4A5-203ENST00000470339 UNC93B1Q9H1C4 597 aa16.5■□□□□ 0.23
COL4A5-203ENST00000470339 MINDY3Q9H8M7 445 aa16.5■□□□□ 0.23
COL4A5-203ENST00000470339 PTPRHQ9HD43 1115 aa16.5■□□□□ 0.23
COL4A5-203ENST00000470339 AGO2Q9UKV8 859 aaKnown RBP16.5■□□□□ 0.23
COL4A5-203ENST00000470339 TNFSF13BQ9Y275 285 aa16.5■□□□□ 0.23
COL4A5-203ENST00000470339 CNTNAP2Q9UHC6 1331 aa16.49■□□□□ 0.23
COL4A5-203ENST00000470339 GTPBP10A4D1E9 387 aaKnown RBP16.49■□□□□ 0.23
COL4A5-203ENST00000470339 ZNF233A6NK53 670 aa16.49■□□□□ 0.23
COL4A5-203ENST00000470339 KBTBD13C9JR72 458 aa16.49■□□□□ 0.23
COL4A5-203ENST00000470339 STX10O60499 249 aa16.49■□□□□ 0.23
COL4A5-203ENST00000470339 MYCNP04198 464 aaPredicted RBP16.49■□□□□ 0.23
COL4A5-203ENST00000470339 EDN1P05305 212 aa16.49■□□□□ 0.23
COL4A5-203ENST00000470339 MCL1Q07820 350 aa16.49■□□□□ 0.23
COL4A5-203ENST00000470339 NCBP1Q09161 790 aaKnown RBP16.49■□□□□ 0.23
COL4A5-203ENST00000470339 AMHR2Q16671 573 aa16.49■□□□□ 0.23
COL4A5-203ENST00000470339 ATF7IP2Q5U623 682 aa16.49■□□□□ 0.23
COL4A5-203ENST00000470339 FBXO46Q6PJ61 603 aaPredicted RBP16.49■□□□□ 0.23
COL4A5-203ENST00000470339 SLC43A3Q8NBI5 491 aa16.49■□□□□ 0.23
COL4A5-203ENST00000470339 SCLT1Q96NL6 688 aa16.49■□□□□ 0.23
COL4A5-203ENST00000470339 OGDHLQ9ULD0 1010 aa16.49■□□□□ 0.23
COL4A5-203ENST00000470339 DNM1LO00429 736 aa16.48■□□□□ 0.23
COL4A5-203ENST00000470339 ABLIM1O14639 778 aa16.48■□□□□ 0.23
COL4A5-203ENST00000470339 PMM2O15305 246 aa16.48■□□□□ 0.23
COL4A5-203ENST00000470339 IQCF3P0C7M6 154 aa16.48■□□□□ 0.23
COL4A5-203ENST00000470339 CCL5P13501 91 aa16.48■□□□□ 0.23
COL4A5-203ENST00000470339 DARSP14868 501 aaKnown RBP16.48■□□□□ 0.23
COL4A5-203ENST00000470339 EIF4BP23588 611 aaKnown RBP16.48■□□□□ 0.23
COL4A5-203ENST00000470339 VAMP7P51809 220 aa16.48■□□□□ 0.23
COL4A5-203ENST00000470339 POU5F1Q01860 360 aaKnown RBP16.48■□□□□ 0.23
COL4A5-203ENST00000470339 KYAT1Q16773 422 aa16.48■□□□□ 0.23
COL4A5-203ENST00000470339 KIZQ2M2Z5 673 aa16.48■□□□□ 0.23
COL4A5-203ENST00000470339 FAM47CQ5HY64 1035 aa16.48■□□□□ 0.23
COL4A5-203ENST00000470339 FIGNQ5HY92 759 aa16.48■□□□□ 0.23
COL4A5-203ENST00000470339 MPZL3Q6UWV2 235 aa16.48■□□□□ 0.23
COL4A5-203ENST00000470339 CCDC186Q7Z3E2 898 aa16.48■□□□□ 0.23
COL4A5-203ENST00000470339 PPFIBP1Q86W92 1011 aa16.48■□□□□ 0.23
COL4A5-203ENST00000470339 RDH13Q8NBN7 331 aa16.48■□□□□ 0.23
COL4A5-203ENST00000470339 PPP1R13LQ8WUF5 828 aa16.48■□□□□ 0.23
COL4A5-203ENST00000470339 VTI1AQ96AJ9 217 aa16.48■□□□□ 0.23
COL4A5-203ENST00000470339 ZBTB45Q96K62 511 aaPredicted RBP16.48■□□□□ 0.23
COL4A5-203ENST00000470339 MSTO1Q9BUK6 570 aa16.48■□□□□ 0.23
COL4A5-203ENST00000470339 PRDM10Q9NQV6 1147 aa16.48■□□□□ 0.23
COL4A5-203ENST00000470339 CENPFP49454 3210 aa16.47■□□□□ 0.23
COL4A5-203ENST00000470339 A0A0U1RQG5 324 aaPredicted RBP16.47■□□□□ 0.23
COL4A5-203ENST00000470339 A0A1W2PQ45 241 aaPredicted RBP16.47■□□□□ 0.23
COL4A5-203ENST00000470339 A0A1W2PQY0 241 aa16.47■□□□□ 0.23
COL4A5-203ENST00000470339 OGTO15294 1046 aa16.47■□□□□ 0.23
COL4A5-203ENST00000470339 P4HA2O15460 535 aa16.47■□□□□ 0.23
COL4A5-203ENST00000470339 N4BP1O75113 896 aaKnown RBP16.47■□□□□ 0.23
COL4A5-203ENST00000470339 ERLIN2O94905 339 aa16.47■□□□□ 0.23
COL4A5-203ENST00000470339 TPM1P09493 284 aa16.47■□□□□ 0.23
COL4A5-203ENST00000470339 SFPQP23246 707 aaKnown RBP eCLIP16.47■□□□□ 0.232e-6■■■■□ 24
COL4A5-203ENST00000470339 AXLP30530 894 aa16.47■□□□□ 0.23
COL4A5-203ENST00000470339 GTF2H1P32780 548 aa16.47■□□□□ 0.23
COL4A5-203ENST00000470339 MATR3P43243 847 aaKnown RBP eCLIP16.47■□□□□ 0.23
COL4A5-203ENST00000470339 CTCFP49711 727 aaPredicted RBP16.47■□□□□ 0.23
COL4A5-203ENST00000470339 MRPS6P82932 125 aaKnown RBP16.47■□□□□ 0.23
COL4A5-203ENST00000470339 CYP24A1Q07973 514 aa16.47■□□□□ 0.23
COL4A5-203ENST00000470339 PTK7Q13308 1070 aa16.47■□□□□ 0.23
COL4A5-203ENST00000470339 NOLC1Q14978 699 aaKnown RBP eCLIP16.47■□□□□ 0.23
COL4A5-203ENST00000470339 SYCP1Q15431 976 aa16.47■□□□□ 0.23
COL4A5-203ENST00000470339 PTGISQ16647 500 aa16.47■□□□□ 0.23
COL4A5-203ENST00000470339 TCERG1LQ5VWI1 586 aa16.47■□□□□ 0.23
COL4A5-203ENST00000470339 APBB1IPQ7Z5R6 666 aaPredicted RBP16.47■□□□□ 0.23
COL4A5-203ENST00000470339 CBWD2Q8IUF1 395 aa16.47■□□□□ 0.23
COL4A5-203ENST00000470339 CCDC150Q8NCX0 1101 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms