RNA–Protein interactions for RNA: ENST00000469802.5

COL9A3-208, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-208ENST00000469802 GIT2Q14161 759 aa18.09■□□□□ 0.49
COL9A3-208ENST00000469802 BMS1Q14692 1282 aaKnown RBP18.09■□□□□ 0.49
COL9A3-208ENST00000469802 RABEP1Q15276 862 aa18.09■□□□□ 0.49
COL9A3-208ENST00000469802 PTPN14Q15678 1187 aa18.09■□□□□ 0.49
COL9A3-208ENST00000469802 FAM184AQ8NB25 1140 aa18.09■□□□□ 0.49
COL9A3-208ENST00000469802 ERMNQ8TAM6 284 aa18.09■□□□□ 0.49
COL9A3-208ENST00000469802 AUTS2Q8WXX7 1259 aa18.09■□□□□ 0.49
COL9A3-208ENST00000469802 NACC1Q96RE7 527 aa18.09■□□□□ 0.49
COL9A3-208ENST00000469802 RNF39Q9H2S5 420 aa18.09■□□□□ 0.49
COL9A3-208ENST00000469802 STK39Q9UEW8 545 aa18.09■□□□□ 0.49
COL9A3-208ENST00000469802 HCN4Q9Y3Q4 1203 aa18.09■□□□□ 0.49
COL9A3-208ENST00000469802 MTCL1Q9Y4B5 1905 aaKnown RBP18.09■□□□□ 0.49
COL9A3-208ENST00000469802 KMT2EQ8IZD2 1858 aa18.09■□□□□ 0.49
COL9A3-208ENST00000469802 TRIP11Q15643 1979 aa18.08■□□□□ 0.49
COL9A3-208ENST00000469802 ARL5CA6NH57 179 aa18.08■□□□□ 0.48
COL9A3-208ENST00000469802 CXCL14O95715 111 aa18.08■□□□□ 0.48
COL9A3-208ENST00000469802 EFEMP2O95967 443 aa18.08■□□□□ 0.48
COL9A3-208ENST00000469802 PLA2G5P39877 138 aa18.08■□□□□ 0.48
COL9A3-208ENST00000469802 MLH1P40692 756 aa18.08■□□□□ 0.48
COL9A3-208ENST00000469802 TOB1P50616 345 aaPredicted RBP18.08■□□□□ 0.48
COL9A3-208ENST00000469802 NBR1Q14596 966 aa18.08■□□□□ 0.48
COL9A3-208ENST00000469802 HAUS3Q68CZ6 603 aa18.08■□□□□ 0.48
COL9A3-208ENST00000469802 PPP4R3CPQ6ZMV5 832 aa18.08■□□□□ 0.48
COL9A3-208ENST00000469802 COLGALT2Q8IYK4 626 aa18.08■□□□□ 0.48
COL9A3-208ENST00000469802 NXF3Q9H4D5 531 aaKnown RBP18.08■□□□□ 0.48
COL9A3-208ENST00000469802 MARCH5Q9NX47 278 aa18.08■□□□□ 0.48
COL9A3-208ENST00000469802 NOL7Q9UMY1 257 aaKnown RBP18.08■□□□□ 0.48
COL9A3-208ENST00000469802 HES2Q9Y543 173 aa18.08■□□□□ 0.48
COL9A3-208ENST00000469802 MUC6Q6W4X9 2439 aa18.08■□□□□ 0.48
COL9A3-208ENST00000469802 MYH11P35749 1972 aa18.08■□□□□ 0.48
COL9A3-208ENST00000469802 A0A1B0GUA9 196 aa18.07■□□□□ 0.48
COL9A3-208ENST00000469802 POMCP01189 267 aa18.07■□□□□ 0.48
COL9A3-208ENST00000469802 NCBP1Q09161 790 aaKnown RBP18.07■□□□□ 0.48
COL9A3-208ENST00000469802 FAM187BQ17R55 369 aa18.07■□□□□ 0.48
COL9A3-208ENST00000469802 TPRNQ4KMQ1 711 aa18.07■□□□□ 0.48
COL9A3-208ENST00000469802 SLC27A1Q6PCB7 646 aa18.07■□□□□ 0.48
COL9A3-208ENST00000469802 RNF168Q8IYW5 571 aaPredicted RBP18.07■□□□□ 0.48
COL9A3-208ENST00000469802 GSTCDQ8NEC7 633 aa18.07■□□□□ 0.48
COL9A3-208ENST00000469802 SLC22A17Q8WUG5 538 aa18.07■□□□□ 0.48
COL9A3-208ENST00000469802 BSNDQ8WZ55 320 aa18.07■□□□□ 0.48
COL9A3-208ENST00000469802 PRIMPOLQ96LW4 560 aa18.07■□□□□ 0.48
COL9A3-208ENST00000469802 GAD1Q99259 594 aa18.07■□□□□ 0.48
COL9A3-208ENST00000469802 CDH22Q9UJ99 828 aa18.07■□□□□ 0.48
COL9A3-208ENST00000469802 GIT1Q9Y2X7 761 aa18.07■□□□□ 0.48
COL9A3-208ENST00000469802 LRRIQ4A6NIV6 560 aa18.06■□□□□ 0.48
COL9A3-208ENST00000469802 NRP1O14786 923 aa18.06■□□□□ 0.48
COL9A3-208ENST00000469802 LILRB3O75022 631 aa18.06■□□□□ 0.48
COL9A3-208ENST00000469802 CYP11B2P19099 503 aa18.06■□□□□ 0.48
COL9A3-208ENST00000469802 ITIH3Q06033 890 aa18.06■□□□□ 0.48
COL9A3-208ENST00000469802 GNL2Q13823 731 aaKnown RBP18.06■□□□□ 0.48
COL9A3-208ENST00000469802 ECM1Q16610 540 aa18.06■□□□□ 0.48
COL9A3-208ENST00000469802 PADI6Q6TGC4 694 aa18.06■□□□□ 0.48
COL9A3-208ENST00000469802 MAEAQ7L5Y9 396 aa18.06■□□□□ 0.48
COL9A3-208ENST00000469802 IGSF22Q8N9C0 903 aa18.06■□□□□ 0.48
COL9A3-208ENST00000469802 ZFP42Q96MM3 310 aa18.06■□□□□ 0.48
COL9A3-208ENST00000469802 FAM193BQ96PV7 902 aaPredicted RBP18.06■□□□□ 0.48
COL9A3-208ENST00000469802 APOL5Q9BWW9 433 aa18.06■□□□□ 0.48
COL9A3-208ENST00000469802 ADAM7Q9H2U9 754 aa18.06■□□□□ 0.48
COL9A3-208ENST00000469802 FZD8Q9H461 694 aa18.06■□□□□ 0.48
COL9A3-208ENST00000469802 PRMT7Q9NVM4 692 aaPredicted RBP18.06■□□□□ 0.48
COL9A3-208ENST00000469802 DZANK1Q9NVP4 752 aa18.06■□□□□ 0.48
COL9A3-208ENST00000469802 MIOSQ9NXC5 875 aa18.06■□□□□ 0.48
COL9A3-208ENST00000469802 ARHGEF35A5YM69 484 aa18.05■□□□□ 0.48
COL9A3-208ENST00000469802 ALDH2P05091 517 aa18.05■□□□□ 0.48
COL9A3-208ENST00000469802 EPCAMP16422 314 aa18.05■□□□□ 0.48
COL9A3-208ENST00000469802 CA8P35219 290 aa18.05■□□□□ 0.48
COL9A3-208ENST00000469802 SCNN1GP51170 649 aa18.05■□□□□ 0.48
COL9A3-208ENST00000469802 CDR2LQ86X02 465 aaPredicted RBP18.05■□□□□ 0.48
COL9A3-208ENST00000469802 EDAQ92838 391 aa18.05■□□□□ 0.48
COL9A3-208ENST00000469802 RPGRIP1Q96KN7 1286 aa18.05■□□□□ 0.48
COL9A3-208ENST00000469802 HERC2P3Q9BVR0 1158 aa18.05■□□□□ 0.48
COL9A3-208ENST00000469802 TRIM6Q9C030 488 aaPredicted RBP18.05■□□□□ 0.48
COL9A3-208ENST00000469802 CCDC113Q9H0I3 377 aa18.05■□□□□ 0.48
COL9A3-208ENST00000469802 FAN1Q9Y2M0 1017 aa18.05■□□□□ 0.48
COL9A3-208ENST00000469802 PCDHB6Q9Y5E3 794 aa18.05■□□□□ 0.48
COL9A3-208ENST00000469802 MYO10Q9HD67 2058 aa18.05■□□□□ 0.48
COL9A3-208ENST00000469802 VWA8A3KMH1 1905 aa18.04■□□□□ 0.48
COL9A3-208ENST00000469802 TTLL13PA6NNM8 815 aa18.04■□□□□ 0.48
COL9A3-208ENST00000469802 NPTXRO95502 500 aa18.04■□□□□ 0.48
COL9A3-208ENST00000469802 SOD2P04179 222 aa18.04■□□□□ 0.48
COL9A3-208ENST00000469802 CCT6AP40227 531 aaKnown RBP18.04■□□□□ 0.48
COL9A3-208ENST00000469802 NAMPTP43490 491 aa18.04■□□□□ 0.48
COL9A3-208ENST00000469802 PTGDRQ13258 359 aa18.04■□□□□ 0.48
COL9A3-208ENST00000469802 HFE2Q6ZVN8 426 aa18.04■□□□□ 0.48
COL9A3-208ENST00000469802 ZBTB8OSQ8IWT0 167 aa18.04■□□□□ 0.48
COL9A3-208ENST00000469802 HACE1Q8IYU2 909 aa18.04■□□□□ 0.48
COL9A3-208ENST00000469802 NECTIN4Q96NY8 510 aa18.04■□□□□ 0.48
COL9A3-208ENST00000469802 C2orf40Q9H1Z8 148 aa18.04■□□□□ 0.48
COL9A3-208ENST00000469802 POMKQ9H5K3 350 aa18.04■□□□□ 0.48
COL9A3-208ENST00000469802 LRWD1Q9UFC0 647 aa18.04■□□□□ 0.48
COL9A3-208ENST00000469802 PRG3Q9Y2Y8 225 aaPredicted RBP18.04■□□□□ 0.48
COL9A3-208ENST00000469802 PDCD11Q14690 1871 aaKnown RBP18.03■□□□□ 0.48
COL9A3-208ENST00000469802 LAD1O00515 517 aa18.03■□□□□ 0.48
COL9A3-208ENST00000469802 ST18O60284 1047 aa18.03■□□□□ 0.48
COL9A3-208ENST00000469802 CD2BP2O95400 341 aaKnown RBP18.03■□□□□ 0.48
COL9A3-208ENST00000469802 EDN1P05305 212 aa18.03■□□□□ 0.48
COL9A3-208ENST00000469802 CNPP09543 421 aaKnown RBP18.03■□□□□ 0.48
COL9A3-208ENST00000469802 PRPHP41219 470 aa18.03■□□□□ 0.48
COL9A3-208ENST00000469802 GRIK3Q13003 919 aa18.03■□□□□ 0.48
COL9A3-208ENST00000469802 PDIA5Q14554 519 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms