RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 SFR1Q86XK3 245 aa6.6□□□□□ -1.35
CHMP3-206ENST00000466032 SLC9A9Q8IVB4 645 aa6.6□□□□□ -1.35
CHMP3-206ENST00000466032 C12orf56Q8IXR9 622 aa6.6□□□□□ -1.35
CHMP3-206ENST00000466032 KLHDC9Q8NEP7 349 aa6.6□□□□□ -1.35
CHMP3-206ENST00000466032 DEPTORQ8TB45 409 aa6.6□□□□□ -1.35
CHMP3-206ENST00000466032 NELFBQ8WX92 580 aa6.6□□□□□ -1.35
CHMP3-206ENST00000466032 IQCDQ96DY2 449 aa6.6□□□□□ -1.35
CHMP3-206ENST00000466032 GLT1D1Q96MS3 346 aa6.6□□□□□ -1.35
CHMP3-206ENST00000466032 CEP89Q96ST8 783 aa6.6□□□□□ -1.35
CHMP3-206ENST00000466032 MKNK1Q9BUB5 465 aa6.6□□□□□ -1.35
CHMP3-206ENST00000466032 GBP3Q9H0R5 595 aa6.6□□□□□ -1.35
CHMP3-206ENST00000466032 BCAS3Q9H6U6 928 aa6.6□□□□□ -1.35
CHMP3-206ENST00000466032 CBX8Q9HC52 389 aa6.6□□□□□ -1.35
CHMP3-206ENST00000466032 SLC39A2Q9NP94 309 aa6.6□□□□□ -1.35
CHMP3-206ENST00000466032 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.6□□□□□ -1.35
CHMP3-206ENST00000466032 MCM3APO60318 1980 aa6.6□□□□□ -1.35
CHMP3-206ENST00000466032 MROH7Q68CQ1 1323 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 LRRC10BA6NIK2 292 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 CCDC169A6NNP5 214 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 K7ENM7 598 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 K7ERI5 159 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 M0QZ92 97 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 DYNC1I1O14576 645 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 ZBTB39O15060 712 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 SLC16A3O15427 465 aaKnown RBP6.59□□□□□ -1.35
CHMP3-206ENST00000466032 ADAMTS4O75173 837 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 OFD1O75665 1012 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 PARNO95453 639 aaKnown RBP6.59□□□□□ -1.35
CHMP3-206ENST00000466032 C22orf31O95567 290 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 PIGRP01833 764 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 MYL3P08590 195 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 BMP6P22004 513 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 GARTP22102 1010 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 KLRC1P26715 233 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 AXLP30530 894 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 HOXC8P31273 242 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 PHKA2P46019 1235 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 NPTX2P47972 431 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 PEX3P56589 373 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 HTRA3P83110 453 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 MAPK7Q13164 816 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 GRIK4Q16099 956 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 MAPK6Q16659 721 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 FAM187BQ17R55 369 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 RNFT1Q5M7Z0 435 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 PLA2G4FQ68DD2 849 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 CDCA2Q69YH5 1023 aaPredicted RBP6.59□□□□□ -1.35
CHMP3-206ENST00000466032 MTHFD1LQ6UB35 978 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 ZPBP2Q6X784 338 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.59□□□□□ -1.35
CHMP3-206ENST00000466032 MAP4K3Q8IVH8 894 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 SYCP3Q8IZU3 236 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 DAW1Q8N136 415 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 CSGALNACT2Q8N6G5 542 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 KIAA0895Q8NCT3 520 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 TMEM161BQ8NDZ6 487 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 TRPV1Q8NER1 839 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 LRRC15Q8TF66 581 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 STRA6Q9BX79 667 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.59□□□□□ -1.35
CHMP3-206ENST00000466032 POLR3FQ9H1D9 316 aaPredicted RBP6.59□□□□□ -1.35
CHMP3-206ENST00000466032 RNPEPQ9H4A4 650 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 XPNPEP1Q9NQW7 623 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 PRMT7Q9NVM4 692 aaPredicted RBP6.59□□□□□ -1.35
CHMP3-206ENST00000466032 ARHGAP28Q9P2N2 729 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 SUCLA2Q9P2R7 463 aaPredicted RBP6.59□□□□□ -1.35
CHMP3-206ENST00000466032 FRMD4BQ9Y2L6 1034 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 NFE2L3Q9Y4A8 694 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 DAAM1Q9Y4D1 1078 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 PTCH2Q9Y6C5 1203 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 SQORQ9Y6N5 450 aa6.59□□□□□ -1.35
CHMP3-206ENST00000466032 A0A0U1RQG5 324 aaPredicted RBP6.58□□□□□ -1.36
CHMP3-206ENST00000466032 ZBTB42B2RXF5 422 aa6.58□□□□□ -1.36
CHMP3-206ENST00000466032 DNM1LO00429 736 aa6.58□□□□□ -1.36
CHMP3-206ENST00000466032 STX10O60499 249 aa6.58□□□□□ -1.36
CHMP3-206ENST00000466032 ASGR1P07306 291 aa6.58□□□□□ -1.36
CHMP3-206ENST00000466032 SMIM10L2AP0DMW4 78 aa6.58□□□□□ -1.36
CHMP3-206ENST00000466032 SMIM10L2BP0DMW5 78 aa6.58□□□□□ -1.36
CHMP3-206ENST00000466032 ELNP15502 786 aa6.58□□□□□ -1.36
CHMP3-206ENST00000466032 MARK3P27448 753 aa6.58□□□□□ -1.36
CHMP3-206ENST00000466032 CASP1P29466 404 aa6.58□□□□□ -1.36
CHMP3-206ENST00000466032 CCND3P30281 292 aaPredicted RBP6.58□□□□□ -1.36
CHMP3-206ENST00000466032 CDC25BP30305 580 aa6.58□□□□□ -1.36
CHMP3-206ENST00000466032 PSMC2P35998 433 aaKnown RBP6.58□□□□□ -1.36
CHMP3-206ENST00000466032 PTENP60484 403 aa6.58□□□□□ -1.36
CHMP3-206ENST00000466032 ADAM17P78536 824 aa6.58□□□□□ -1.36
CHMP3-206ENST00000466032 RAD51AP2Q09MP3 1159 aa6.58□□□□□ -1.36
CHMP3-206ENST00000466032 LAMTOR4Q0VGL1 99 aa6.58□□□□□ -1.36
CHMP3-206ENST00000466032 CETN1Q12798 172 aa6.58□□□□□ -1.36
CHMP3-206ENST00000466032 ADAM9Q13443 819 aa6.58□□□□□ -1.36
CHMP3-206ENST00000466032 LRRC41Q15345 812 aa6.58□□□□□ -1.36
CHMP3-206ENST00000466032 SURF1Q15526 300 aa6.58□□□□□ -1.36
CHMP3-206ENST00000466032 KCNA10Q16322 511 aa6.58□□□□□ -1.36
CHMP3-206ENST00000466032 ZCWPW2Q504Y3 356 aa6.58□□□□□ -1.36
CHMP3-206ENST00000466032 ISM2Q6H9L7 571 aa6.58□□□□□ -1.36
CHMP3-206ENST00000466032 CCSAPQ6IQ19 270 aaPredicted RBP6.58□□□□□ -1.36
CHMP3-206ENST00000466032 KLHL10Q6JEL2 608 aa6.58□□□□□ -1.36
CHMP3-206ENST00000466032 TTI2Q6NXR4 508 aa6.58□□□□□ -1.36
CHMP3-206ENST00000466032 C11orf57Q6ZUT1 292 aaPredicted RBP6.58□□□□□ -1.36
CHMP3-206ENST00000466032 FRMD5Q7Z6J6 570 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms