RNA–Protein interactions for RNA: ENST00000466010.1

TPM3-214, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-214ENST00000466010 GJA9P57773 515 aa7.42□□□□□ -1.22
TPM3-214ENST00000466010 TNFAIP2Q03169 654 aa7.42□□□□□ -1.22
TPM3-214ENST00000466010 HLTFQ14527 1009 aaKnown RBP eCLIP7.42□□□□□ -1.22
TPM3-214ENST00000466010 IFIT1BQ5T764 474 aaKnown RBP7.42□□□□□ -1.22
TPM3-214ENST00000466010 RNF219Q5W0B1 726 aaPredicted RBP7.42□□□□□ -1.22
TPM3-214ENST00000466010 ANO1Q5XXA6 986 aa7.42□□□□□ -1.22
TPM3-214ENST00000466010 SLC6A19Q695T7 634 aa7.42□□□□□ -1.22
TPM3-214ENST00000466010 NSMFQ6X4W1 530 aa7.42□□□□□ -1.22
TPM3-214ENST00000466010 RALYLQ86SE5 291 aaKnown RBP7.42□□□□□ -1.22
TPM3-214ENST00000466010 C12orf40Q86WS4 652 aa7.42□□□□□ -1.22
TPM3-214ENST00000466010 MCATQ8IVS2 390 aaKnown RBP7.42□□□□□ -1.22
TPM3-214ENST00000466010 RAVER1Q8IY67 606 aaKnown RBP7.42□□□□□ -1.22
TPM3-214ENST00000466010 SAMD3Q8N6K7 520 aa7.42□□□□□ -1.22
TPM3-214ENST00000466010 LRRN4CLQ8ND94 238 aa7.42□□□□□ -1.22
TPM3-214ENST00000466010 KLHDC9Q8NEP7 349 aa7.42□□□□□ -1.22
TPM3-214ENST00000466010 DDX1Q92499 740 aaKnown RBP7.42□□□□□ -1.22
TPM3-214ENST00000466010 CLUHP3Q96NS8 147 aa7.42□□□□□ -1.22
TPM3-214ENST00000466010 USP26Q9BXU7 913 aa7.42□□□□□ -1.22
TPM3-214ENST00000466010 AP5M1Q9H0R1 490 aa7.42□□□□□ -1.22
TPM3-214ENST00000466010 UPF3AQ9H1J1 476 aaKnown RBP7.42□□□□□ -1.22
TPM3-214ENST00000466010 INCENPQ9NQS7 918 aa7.42□□□□□ -1.22
TPM3-214ENST00000466010 STARD7Q9NQZ5 370 aa7.42□□□□□ -1.22
TPM3-214ENST00000466010 MAP3K20Q9NYL2 800 aaKnown RBP7.42□□□□□ -1.22
TPM3-214ENST00000466010 NEDD4P46934 1319 aa7.42□□□□□ -1.22
TPM3-214ENST00000466010 SZT2Q5T011 3432 aa7.42□□□□□ -1.22
TPM3-214ENST00000466010 PLXNA1Q9UIW2 1896 aa7.41□□□□□ -1.22
TPM3-214ENST00000466010 ELOA3CA0A087WX78 387 aaPredicted RBP7.41□□□□□ -1.22
TPM3-214ENST00000466010 A0A0U1RQG5 324 aaPredicted RBP7.41□□□□□ -1.22
TPM3-214ENST00000466010 E2F8A0AVK6 867 aa7.41□□□□□ -1.22
TPM3-214ENST00000466010 PTPDC1A2A3K4 754 aa7.41□□□□□ -1.22
TPM3-214ENST00000466010 ELOA3DA6NLF2 546 aaPredicted RBP7.41□□□□□ -1.22
TPM3-214ENST00000466010 LINC01387J3KSC0 135 aa7.41□□□□□ -1.22
TPM3-214ENST00000466010 NKRFO15226 690 aaKnown RBP eCLIP7.41□□□□□ -1.22
TPM3-214ENST00000466010 FANCGO15287 622 aa7.41□□□□□ -1.22
TPM3-214ENST00000466010 BRINP1O60477 761 aa7.41□□□□□ -1.22
TPM3-214ENST00000466010 TP53P04637 393 aaPredicted RBP7.41□□□□□ -1.22
TPM3-214ENST00000466010 EPHX1P07099 455 aa7.41□□□□□ -1.22
TPM3-214ENST00000466010 TAL1P17542 331 aaPredicted RBP7.41□□□□□ -1.22
TPM3-214ENST00000466010 MX2P20592 715 aa7.41□□□□□ -1.22
TPM3-214ENST00000466010 FLT3P36888 993 aa7.41□□□□□ -1.22
TPM3-214ENST00000466010 GNALP38405 381 aa7.41□□□□□ -1.22
TPM3-214ENST00000466010 NEK2P51955 445 aa7.41□□□□□ -1.22
TPM3-214ENST00000466010 CNTN2Q02246 1040 aa7.41□□□□□ -1.22
TPM3-214ENST00000466010 MCL1Q07820 350 aa7.41□□□□□ -1.22
TPM3-214ENST00000466010 STRN3Q13033 797 aa7.41□□□□□ -1.22
TPM3-214ENST00000466010 KCNA10Q16322 511 aa7.41□□□□□ -1.22
TPM3-214ENST00000466010 ELOA3BQ3SY89 546 aa7.41□□□□□ -1.22
TPM3-214ENST00000466010 TRIM60Q495X7 471 aa7.41□□□□□ -1.22
TPM3-214ENST00000466010 ZC3H12AQ5D1E8 599 aaKnown RBP7.41□□□□□ -1.22
TPM3-214ENST00000466010 TRIM61Q5EBN2 209 aa7.41□□□□□ -1.22
TPM3-214ENST00000466010 YOD1Q5VVQ6 348 aaPredicted RBP7.41□□□□□ -1.22
TPM3-214ENST00000466010 TDRD10Q5VZ19 366 aaKnown RBP7.41□□□□□ -1.22
TPM3-214ENST00000466010 TXNDC11Q6PKC3 985 aa7.41□□□□□ -1.22
TPM3-214ENST00000466010 CASC1Q6TDU7 716 aa7.41□□□□□ -1.22
TPM3-214ENST00000466010 RNF207Q6ZRF8 634 aa7.41□□□□□ -1.22
TPM3-214ENST00000466010 KIAA1211Q6ZU35 1233 aa7.41□□□□□ -1.22
TPM3-214ENST00000466010 ZNF227Q86WZ6 799 aa7.41□□□□□ -1.22
TPM3-214ENST00000466010 HID1Q8IV36 788 aa7.41□□□□□ -1.22
TPM3-214ENST00000466010 ENAHQ8N8S7 591 aaPredicted RBP7.41□□□□□ -1.22
TPM3-214ENST00000466010 KLHL23Q8NBE8 558 aa7.41□□□□□ -1.22
TPM3-214ENST00000466010 ELOA3Q8NG57 546 aa7.41□□□□□ -1.22
TPM3-214ENST00000466010 FERMT2Q96AC1 680 aa7.41□□□□□ -1.22
TPM3-214ENST00000466010 TMEM87BQ96K49 555 aa7.41□□□□□ -1.22
TPM3-214ENST00000466010 CCDC74BQ96LY2 380 aa7.41□□□□□ -1.22
TPM3-214ENST00000466010 FGD4Q96M96 766 aa7.41□□□□□ -1.22
TPM3-214ENST00000466010 RPS6KC1Q96S38 1066 aa7.41□□□□□ -1.22
TPM3-214ENST00000466010 SPOCK3Q9BQ16 436 aa7.41□□□□□ -1.22
TPM3-214ENST00000466010 MTA3Q9BTC8 594 aa7.41□□□□□ -1.22
TPM3-214ENST00000466010 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.41□□□□□ -1.22
TPM3-214ENST00000466010 SENP2Q9HC62 589 aa7.41□□□□□ -1.22
TPM3-214ENST00000466010 PRDM5Q9NQX1 630 aaPredicted RBP7.41□□□□□ -1.22
TPM3-214ENST00000466010 FAM86C1Q9NVL1 165 aa7.41□□□□□ -1.22
TPM3-214ENST00000466010 ZSWIM5Q9P217 1185 aa7.41□□□□□ -1.22
TPM3-214ENST00000466010 TNKSO95271 1327 aa7.41□□□□□ -1.22
TPM3-214ENST00000466010 ABCB11O95342 1321 aa7.41□□□□□ -1.22
TPM3-214ENST00000466010 FRMPD2Q68DX3 1309 aaPredicted RBP7.41□□□□□ -1.22
TPM3-214ENST00000466010 LAMA2P24043 3122 aaKnown RBP7.41□□□□□ -1.22
TPM3-214ENST00000466010 LAMA4Q16363 1823 aa7.41□□□□□ -1.22
TPM3-214ENST00000466010 B4E1Z4 1266 aa7.4□□□□□ -1.22
TPM3-214ENST00000466010 C2CD2LO14523 706 aa7.4□□□□□ -1.22
TPM3-214ENST00000466010 KIAA0355O15063 1070 aa7.4□□□□□ -1.22
TPM3-214ENST00000466010 PRODHO43272 600 aa7.4□□□□□ -1.22
TPM3-214ENST00000466010 DHX16O60231 1041 aaKnown RBP7.4□□□□□ -1.22
TPM3-214ENST00000466010 KPNA6O60684 536 aa7.4□□□□□ -1.22
TPM3-214ENST00000466010 KATNA1O75449 491 aa7.4□□□□□ -1.22
TPM3-214ENST00000466010 PPM1BO75688 479 aa7.4□□□□□ -1.22
TPM3-214ENST00000466010 EYA4O95677 639 aa7.4□□□□□ -1.22
TPM3-214ENST00000466010 ITGAVP06756 1048 aa7.4□□□□□ -1.22
TPM3-214ENST00000466010 PABPC1P11940 636 aaKnown RBP7.4□□□□□ -1.22
TPM3-214ENST00000466010 GSPT1P15170 499 aaKnown RBP7.4□□□□□ -1.22
TPM3-214ENST00000466010 CHMLP26374 656 aa7.4□□□□□ -1.22
TPM3-214ENST00000466010 SLC16A2P36021 539 aa7.4□□□□□ -1.22
TPM3-214ENST00000466010 CPT1AP50416 773 aa7.4□□□□□ -1.22
TPM3-214ENST00000466010 NEK4P51957 841 aa7.4□□□□□ -1.22
TPM3-214ENST00000466010 TLE2Q04725 743 aa7.4□□□□□ -1.22
TPM3-214ENST00000466010 BAATQ14032 418 aaPredicted RBP7.4□□□□□ -1.22
TPM3-214ENST00000466010 DHCR24Q15392 516 aa7.4□□□□□ -1.22
TPM3-214ENST00000466010 FSCN1Q16658 493 aaKnown RBP7.4□□□□□ -1.22
TPM3-214ENST00000466010 DUSP28Q4G0W2 176 aa7.4□□□□□ -1.22
TPM3-214ENST00000466010 MUM1L1Q5H9M0 696 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms