RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 NOSTRINQ8IVI9 506 aa20.92■□□□□ 0.94
SF3A1-205ENST00000463818 FAM122AQ96E09 287 aa20.92■□□□□ 0.94
SF3A1-205ENST00000463818 GAD1Q99259 594 aa20.92■□□□□ 0.94
SF3A1-205ENST00000463818 MIOSQ9NXC5 875 aa20.92■□□□□ 0.94
SF3A1-205ENST00000463818 ARIH1Q9Y4X5 557 aaPredicted RBP20.92■□□□□ 0.94
SF3A1-205ENST00000463818 B4GALT5O43286 388 aa20.91■□□□□ 0.94
SF3A1-205ENST00000463818 TRAPPC10P48553 1259 aa20.91■□□□□ 0.94
SF3A1-205ENST00000463818 C4orf32Q8N8J7 132 aa20.91■□□□□ 0.94
SF3A1-205ENST00000463818 MCPH1Q8NEM0 835 aa20.91■□□□□ 0.94
SF3A1-205ENST00000463818 EDAQ92838 391 aa20.91■□□□□ 0.94
SF3A1-205ENST00000463818 NOL7Q9UMY1 257 aaKnown RBP20.91■□□□□ 0.94
SF3A1-205ENST00000463818 ARL5CA6NH57 179 aa20.9■□□□□ 0.94
SF3A1-205ENST00000463818 LRRIQ4A6NIV6 560 aa20.9■□□□□ 0.94
SF3A1-205ENST00000463818 PLA2G5P39877 138 aa20.9■□□□□ 0.94
SF3A1-205ENST00000463818 NBR1Q14596 966 aa20.9■□□□□ 0.94
SF3A1-205ENST00000463818 POTEGQ6S5H5 508 aa20.9■□□□□ 0.94
SF3A1-205ENST00000463818 CDR2LQ86X02 465 aaPredicted RBP20.9■□□□□ 0.94
SF3A1-205ENST00000463818 SLC22A17Q8WUG5 538 aa20.9■□□□□ 0.94
SF3A1-205ENST00000463818 APOL6Q9BWW8 343 aa20.9■□□□□ 0.94
SF3A1-205ENST00000463818 TRIM6Q9C030 488 aaPredicted RBP20.9■□□□□ 0.94
SF3A1-205ENST00000463818 ADAM7Q9H2U9 754 aa20.9■□□□□ 0.94
SF3A1-205ENST00000463818 CDH22Q9UJ99 828 aa20.9■□□□□ 0.94
SF3A1-205ENST00000463818 GIT1Q9Y2X7 761 aa20.9■□□□□ 0.94
SF3A1-205ENST00000463818 A0A1B0GUA9 196 aa20.89■□□□□ 0.93
SF3A1-205ENST00000463818 INPPL1O15357 1258 aa20.89■□□□□ 0.93
SF3A1-205ENST00000463818 SSBP05455 408 aaKnown RBP eCLIP20.89■□□□□ 0.93
SF3A1-205ENST00000463818 EPCAMP16422 314 aa20.89■□□□□ 0.93
SF3A1-205ENST00000463818 CYP11B2P19099 503 aa20.89■□□□□ 0.93
SF3A1-205ENST00000463818 U2AF2P26368 475 aaKnown RBP eCLIP20.89■□□□□ 0.93
SF3A1-205ENST00000463818 MLH1P40692 756 aa20.89■□□□□ 0.93
SF3A1-205ENST00000463818 OR1G1P47890 313 aa20.89■□□□□ 0.93
SF3A1-205ENST00000463818 ITIH3Q06033 890 aa20.89■□□□□ 0.93
SF3A1-205ENST00000463818 PTPN14Q15678 1187 aa20.89■□□□□ 0.93
SF3A1-205ENST00000463818 CES5AQ6NT32 575 aa20.89■□□□□ 0.93
SF3A1-205ENST00000463818 PADI6Q6TGC4 694 aa20.89■□□□□ 0.93
SF3A1-205ENST00000463818 COLGALT2Q8IYK4 626 aa20.89■□□□□ 0.93
SF3A1-205ENST00000463818 C12orf76Q8N812 135 aaPredicted RBP20.89■□□□□ 0.93
SF3A1-205ENST00000463818 STK39Q9UEW8 545 aa20.89■□□□□ 0.93
SF3A1-205ENST00000463818 PRG3Q9Y2Y8 225 aaPredicted RBP20.89■□□□□ 0.93
SF3A1-205ENST00000463818 ARHGEF35A5YM69 484 aa20.88■□□□□ 0.93
SF3A1-205ENST00000463818 LILRB3O75022 631 aa20.88■□□□□ 0.93
SF3A1-205ENST00000463818 NPTXRO95502 500 aa20.88■□□□□ 0.93
SF3A1-205ENST00000463818 MUTP22033 750 aa20.88■□□□□ 0.93
SF3A1-205ENST00000463818 AKAP5P24588 427 aa20.88■□□□□ 0.93
SF3A1-205ENST00000463818 CCT6AP40227 531 aaKnown RBP20.88■□□□□ 0.93
SF3A1-205ENST00000463818 SCNN1GP51170 649 aa20.88■□□□□ 0.93
SF3A1-205ENST00000463818 ZXDAP98168 799 aa20.88■□□□□ 0.93
SF3A1-205ENST00000463818 ECM1Q16610 540 aa20.88■□□□□ 0.93
SF3A1-205ENST00000463818 RARS2Q5T160 578 aaKnown RBP20.88■□□□□ 0.93
SF3A1-205ENST00000463818 KANK3Q6NY19 840 aa20.88■□□□□ 0.93
SF3A1-205ENST00000463818 SLC27A1Q6PCB7 646 aa20.88■□□□□ 0.93
SF3A1-205ENST00000463818 HFE2Q6ZVN8 426 aa20.88■□□□□ 0.93
SF3A1-205ENST00000463818 HACE1Q8IYU2 909 aa20.88■□□□□ 0.93
SF3A1-205ENST00000463818 ZFP42Q96MM3 310 aa20.88■□□□□ 0.93
SF3A1-205ENST00000463818 KLHL5Q96PQ7 755 aa20.88■□□□□ 0.93
SF3A1-205ENST00000463818 FZD8Q9H461 694 aa20.88■□□□□ 0.93
SF3A1-205ENST00000463818 NXF3Q9H4D5 531 aaKnown RBP20.88■□□□□ 0.93
SF3A1-205ENST00000463818 LRWD1Q9UFC0 647 aa20.88■□□□□ 0.93
SF3A1-205ENST00000463818 C5orf42Q9H799 3197 aa20.87■□□□□ 0.93
SF3A1-205ENST00000463818 SP100P23497 879 aaPredicted RBP20.87■□□□□ 0.93
SF3A1-205ENST00000463818 KLRC2P26717 231 aa20.87■□□□□ 0.93
SF3A1-205ENST00000463818 TOB1P50616 345 aaPredicted RBP20.87■□□□□ 0.93
SF3A1-205ENST00000463818 FXR2P51116 673 aaKnown RBP eCLIP20.87■□□□□ 0.933e-8■□□□□ 10.2
SF3A1-205ENST00000463818 DSC1Q08554 894 aa20.87■□□□□ 0.93
SF3A1-205ENST00000463818 PDIA5Q14554 519 aa20.87■□□□□ 0.93
SF3A1-205ENST00000463818 RABEP1Q15276 862 aa20.87■□□□□ 0.93
SF3A1-205ENST00000463818 PPP4R3CPQ6ZMV5 832 aa20.87■□□□□ 0.93
SF3A1-205ENST00000463818 TAS1R1Q7RTX1 841 aa20.87■□□□□ 0.93
SF3A1-205ENST00000463818 PPFIBP1Q86W92 1011 aa20.87■□□□□ 0.93
SF3A1-205ENST00000463818 ZBTB8OSQ8IWT0 167 aa20.87■□□□□ 0.93
SF3A1-205ENST00000463818 BSNDQ8WZ55 320 aa20.87■□□□□ 0.93
SF3A1-205ENST00000463818 EMILIN2Q9BXX0 1053 aa20.87■□□□□ 0.93
SF3A1-205ENST00000463818 PRMT7Q9NVM4 692 aaPredicted RBP20.87■□□□□ 0.93
SF3A1-205ENST00000463818 DZANK1Q9NVP4 752 aa20.87■□□□□ 0.93
SF3A1-205ENST00000463818 MARCH5Q9NX47 278 aa20.87■□□□□ 0.93
SF3A1-205ENST00000463818 PARP2Q9UGN5 583 aa20.87■□□□□ 0.93
SF3A1-205ENST00000463818 CNPP09543 421 aaKnown RBP20.86■□□□□ 0.93
SF3A1-205ENST00000463818 WEE2P0C1S8 567 aa20.86■□□□□ 0.93
SF3A1-205ENST00000463818 PTGDRQ13258 359 aa20.86■□□□□ 0.93
SF3A1-205ENST00000463818 FAM187BQ17R55 369 aa20.86■□□□□ 0.93
SF3A1-205ENST00000463818 HAUS3Q68CZ6 603 aa20.86■□□□□ 0.93
SF3A1-205ENST00000463818 CDCA2Q69YH5 1023 aaPredicted RBP20.86■□□□□ 0.93
SF3A1-205ENST00000463818 TRIM67Q6ZTA4 783 aa20.86■□□□□ 0.93
SF3A1-205ENST00000463818 GSTCDQ8NEC7 633 aa20.86■□□□□ 0.93
SF3A1-205ENST00000463818 PRIMPOLQ96LW4 560 aa20.86■□□□□ 0.93
SF3A1-205ENST00000463818 NECTIN4Q96NY8 510 aa20.86■□□□□ 0.93
SF3A1-205ENST00000463818 POMKQ9H5K3 350 aa20.86■□□□□ 0.93
SF3A1-205ENST00000463818 POLD4Q9HCU8 107 aa20.86■□□□□ 0.93
SF3A1-205ENST00000463818 MRPL17Q9NRX2 175 aaKnown RBP20.86■□□□□ 0.93
SF3A1-205ENST00000463818 KLK14Q9P0G3 267 aa20.86■□□□□ 0.93
SF3A1-205ENST00000463818 KIAA1024Q9UPX6 916 aa20.86■□□□□ 0.93
SF3A1-205ENST00000463818 PCDHB6Q9Y5E3 794 aa20.86■□□□□ 0.93
SF3A1-205ENST00000463818 TTLL13PA6NNM8 815 aa20.85■□□□□ 0.93
SF3A1-205ENST00000463818 NR1I2O75469 434 aa20.85■□□□□ 0.93
SF3A1-205ENST00000463818 SOD2P04179 222 aa20.85■□□□□ 0.93
SF3A1-205ENST00000463818 MTHFRP42898 656 aa20.85■□□□□ 0.93
SF3A1-205ENST00000463818 ATAT1Q5SQI0 421 aa20.85■□□□□ 0.93
SF3A1-205ENST00000463818 CABP7Q86V35 215 aa20.85■□□□□ 0.93
SF3A1-205ENST00000463818 RIPOR3Q96MK2 946 aa20.85■□□□□ 0.93
SF3A1-205ENST00000463818 COLEC11Q9BWP8 271 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms