RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 PDZD7Q9H5P4 517 aa12.95□□□□□ -0.34
CPNE1-221ENST00000462352 SLC39A2Q9NP94 309 aa12.95□□□□□ -0.34
CPNE1-221ENST00000462352 FAM105AQ9NUU6 356 aa12.95□□□□□ -0.34
CPNE1-221ENST00000462352 PRPF6O94906 941 aaKnown RBP12.94□□□□□ -0.34
CPNE1-221ENST00000462352 RHOBTB3O94955 611 aa12.94□□□□□ -0.34
CPNE1-221ENST00000462352 UPP2O95045 317 aa12.94□□□□□ -0.34
CPNE1-221ENST00000462352 SMC2O95347 1197 aa12.94□□□□□ -0.34
CPNE1-221ENST00000462352 PIGRP01833 764 aa12.94□□□□□ -0.34
CPNE1-221ENST00000462352 RAB27AP51159 221 aa12.94□□□□□ -0.34
CPNE1-221ENST00000462352 FAM189BP81408 668 aa12.94□□□□□ -0.34
CPNE1-221ENST00000462352 KCNA1Q09470 495 aa12.94□□□□□ -0.34
CPNE1-221ENST00000462352 STK4Q13043 487 aa12.94□□□□□ -0.34
CPNE1-221ENST00000462352 PSMD2Q13200 908 aa12.94□□□□□ -0.34
CPNE1-221ENST00000462352 KCNB1Q14721 858 aa12.94□□□□□ -0.34
CPNE1-221ENST00000462352 CAMK4Q16566 473 aa12.94□□□□□ -0.34
CPNE1-221ENST00000462352 L1TD1Q5T7N2 865 aaKnown RBP12.94□□□□□ -0.34
CPNE1-221ENST00000462352 EEF1DP3Q658K8 133 aa12.94□□□□□ -0.34
CPNE1-221ENST00000462352 FAM109BQ6ICB4 259 aaPredicted RBP12.94□□□□□ -0.34
CPNE1-221ENST00000462352 ZPBP2Q6X784 338 aa12.94□□□□□ -0.34
CPNE1-221ENST00000462352 STXBP4Q6ZWJ1 553 aa12.94□□□□□ -0.34
CPNE1-221ENST00000462352 EPM2AIP1Q7L775 607 aaPredicted RBP12.94□□□□□ -0.34
CPNE1-221ENST00000462352 ECHDC2Q86YB7 292 aa12.94□□□□□ -0.34
CPNE1-221ENST00000462352 CRIPAKQ8N1N5 446 aa12.94□□□□□ -0.34
CPNE1-221ENST00000462352 SPATA20Q8TB22 786 aa12.94□□□□□ -0.34
CPNE1-221ENST00000462352 SMARCE1Q969G3 411 aa12.94□□□□□ -0.34
CPNE1-221ENST00000462352 BICD1Q96G01 975 aa12.94□□□□□ -0.34
CPNE1-221ENST00000462352 ACCSQ96QU6 501 aa12.94□□□□□ -0.34
CPNE1-221ENST00000462352 ELAC1Q9H777 363 aaKnown RBP12.94□□□□□ -0.34
CPNE1-221ENST00000462352 PTPRHQ9HD43 1115 aa12.94□□□□□ -0.34
CPNE1-221ENST00000462352 TMEM161AQ9NX61 479 aa12.94□□□□□ -0.34
CPNE1-221ENST00000462352 TNFSF13BQ9Y275 285 aa12.94□□□□□ -0.34
CPNE1-221ENST00000462352 PCDHA5Q9Y5H7 936 aa12.94□□□□□ -0.34
CPNE1-221ENST00000462352 GRXCR1A8MXD5 290 aa12.93□□□□□ -0.34
CPNE1-221ENST00000462352 HNRNPDLO14979 420 aaKnown RBP12.93□□□□□ -0.34
CPNE1-221ENST00000462352 EIF3DO15371 548 aaKnown RBP eCLIP12.93□□□□□ -0.34
CPNE1-221ENST00000462352 ZNF623O75123 536 aa12.93□□□□□ -0.34
CPNE1-221ENST00000462352 TOM1L1O75674 476 aa12.93□□□□□ -0.34
CPNE1-221ENST00000462352 GJB5O95377 273 aa12.93□□□□□ -0.34
CPNE1-221ENST00000462352 NPTXRO95502 500 aa12.93□□□□□ -0.34
CPNE1-221ENST00000462352 STAG3L1P0CL83 205 aa12.93□□□□□ -0.34
CPNE1-221ENST00000462352 SKIP12755 728 aa12.93□□□□□ -0.34
CPNE1-221ENST00000462352 ATF7P17544 494 aaPredicted RBP12.93□□□□□ -0.34
CPNE1-221ENST00000462352 PROZP22891 400 aa12.93□□□□□ -0.34
CPNE1-221ENST00000462352 LIG4P49917 911 aa12.93□□□□□ -0.34
CPNE1-221ENST00000462352 FAM117BQ6P1L5 589 aa12.93□□□□□ -0.34
CPNE1-221ENST00000462352 MRPL10Q7Z7H8 261 aaKnown RBP12.93□□□□□ -0.34
CPNE1-221ENST00000462352 ZNF598Q86UK7 904 aaKnown RBP12.93□□□□□ -0.34
CPNE1-221ENST00000462352 NPAS4Q8IUM7 802 aa12.93□□□□□ -0.34
CPNE1-221ENST00000462352 HERC6Q8IVU3 1022 aa12.93□□□□□ -0.34
CPNE1-221ENST00000462352 KIAA0895Q8NCT3 520 aa12.93□□□□□ -0.34
CPNE1-221ENST00000462352 SMG8Q8ND04 991 aaKnown RBP12.93□□□□□ -0.34
CPNE1-221ENST00000462352 ZNF507Q8TCN5 953 aa12.93□□□□□ -0.34
CPNE1-221ENST00000462352 ZBTB45Q96K62 511 aaPredicted RBP12.93□□□□□ -0.34
CPNE1-221ENST00000462352 GSDMAQ96QA5 445 aa12.93□□□□□ -0.34
CPNE1-221ENST00000462352 ADPGKQ9BRR6 497 aa12.93□□□□□ -0.34
CPNE1-221ENST00000462352 TRIM6Q9C030 488 aaPredicted RBP12.93□□□□□ -0.34
CPNE1-221ENST00000462352 IKZF4Q9H2S9 585 aa12.93□□□□□ -0.34
CPNE1-221ENST00000462352 CLSTN2Q9H4D0 955 aa12.93□□□□□ -0.34
CPNE1-221ENST00000462352 RMND1Q9NWS8 449 aa12.93□□□□□ -0.34
CPNE1-221ENST00000462352 LRFN2Q9ULH4 789 aa12.93□□□□□ -0.34
CPNE1-221ENST00000462352 EXOC7Q9UPT5 735 aa12.93□□□□□ -0.34
CPNE1-221ENST00000462352 PCDHB7Q9Y5E2 793 aa12.93□□□□□ -0.34
CPNE1-221ENST00000462352 PCDHB2Q9Y5E7 798 aa12.93□□□□□ -0.34
CPNE1-221ENST00000462352 PTPRSQ13332 1948 aa12.93□□□□□ -0.34
CPNE1-221ENST00000462352 TTC3P53804 2025 aa12.93□□□□□ -0.34
CPNE1-221ENST00000462352 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.92□□□□□ -0.34
CPNE1-221ENST00000462352 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.92□□□□□ -0.34
CPNE1-221ENST00000462352 ABLIM1O14639 778 aa12.92□□□□□ -0.34
CPNE1-221ENST00000462352 EOMESO95936 686 aa12.92□□□□□ -0.34
CPNE1-221ENST00000462352 MBD3O95983 291 aa12.92□□□□□ -0.34
CPNE1-221ENST00000462352 DCAF4L1Q3SXM0 396 aa12.92□□□□□ -0.34
CPNE1-221ENST00000462352 ZNF568Q3ZCX4 644 aa12.92□□□□□ -0.34
CPNE1-221ENST00000462352 SLC39A4Q6P5W5 647 aa12.92□□□□□ -0.34
CPNE1-221ENST00000462352 MPZL3Q6UWV2 235 aa12.92□□□□□ -0.34
CPNE1-221ENST00000462352 ZBTB33Q86T24 672 aa12.92□□□□□ -0.34
CPNE1-221ENST00000462352 RNF169Q8NCN4 708 aa12.92□□□□□ -0.34
CPNE1-221ENST00000462352 SCFD1Q8WVM8 642 aa12.92□□□□□ -0.34
CPNE1-221ENST00000462352 LPPQ93052 612 aa12.92□□□□□ -0.34
CPNE1-221ENST00000462352 TCHPQ9BT92 498 aa12.92□□□□□ -0.34
CPNE1-221ENST00000462352 ZBED2Q9BTP6 218 aa12.92□□□□□ -0.34
CPNE1-221ENST00000462352 NUP62CLQ9H1M0 184 aa12.92□□□□□ -0.34
CPNE1-221ENST00000462352 CDT1Q9H211 546 aa12.92□□□□□ -0.34
CPNE1-221ENST00000462352 NXF3Q9H4D5 531 aaKnown RBP12.92□□□□□ -0.34
CPNE1-221ENST00000462352 TMEM206Q9H813 350 aa12.92□□□□□ -0.34
CPNE1-221ENST00000462352 ANKFY1Q9P2R3 1169 aa12.92□□□□□ -0.34
CPNE1-221ENST00000462352 GDAQ9Y2T3 454 aa12.92□□□□□ -0.34
CPNE1-221ENST00000462352 HES2Q9Y543 173 aa12.92□□□□□ -0.34
CPNE1-221ENST00000462352 IPPQ9Y573 584 aa12.92□□□□□ -0.34
CPNE1-221ENST00000462352 UBE4BO95155 1302 aa12.91□□□□□ -0.34
CPNE1-221ENST00000462352 TRIOBPQ9H2D6 2365 aa12.91□□□□□ -0.34
CPNE1-221ENST00000462352 MEIS3P2A8K0S8 358 aa12.91□□□□□ -0.34
CPNE1-221ENST00000462352 TISP43B9A030 160 aa12.91□□□□□ -0.34
CPNE1-221ENST00000462352 ANKRD63C9JTQ0 380 aa12.91□□□□□ -0.34
CPNE1-221ENST00000462352 CLDN3O15551 220 aa12.91□□□□□ -0.34
CPNE1-221ENST00000462352 DGKIO75912 1065 aa12.91□□□□□ -0.34
CPNE1-221ENST00000462352 MCF2P10911 925 aa12.91□□□□□ -0.34
CPNE1-221ENST00000462352 FGFR1P11362 822 aa12.91□□□□□ -0.34
CPNE1-221ENST00000462352 ITGA4P13612 1032 aa12.91□□□□□ -0.34
CPNE1-221ENST00000462352 HOXD13P35453 343 aa12.91□□□□□ -0.34
CPNE1-221ENST00000462352 RABGGTBP53611 331 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms