RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 PRR18Q8N4B5 295 aa3.88□□□□□ -1.79
HDAC6-212ENST00000461608 STPG3Q8N7X2 389 aa3.88□□□□□ -1.79
HDAC6-212ENST00000461608 CHST13Q8NET6 341 aa3.88□□□□□ -1.79
HDAC6-212ENST00000461608 ZBTB8AQ96BR9 441 aa3.88□□□□□ -1.79
HDAC6-212ENST00000461608 MVB12AQ96EY5 273 aa3.88□□□□□ -1.79
HDAC6-212ENST00000461608 ZSWIM3Q96MP5 696 aa3.88□□□□□ -1.79
HDAC6-212ENST00000461608 WDR92Q96MX6 357 aa3.88□□□□□ -1.79
HDAC6-212ENST00000461608 PSMD1Q99460 953 aa3.88□□□□□ -1.79
HDAC6-212ENST00000461608 SARGQ9BW04 601 aa3.88□□□□□ -1.79
HDAC6-212ENST00000461608 GTPBP4Q9BZE4 634 aaKnown RBP3.88□□□□□ -1.79
HDAC6-212ENST00000461608 MANSC1Q9H8J5 431 aa3.88□□□□□ -1.79
HDAC6-212ENST00000461608 MSL2Q9HCI7 577 aa3.88□□□□□ -1.79
HDAC6-212ENST00000461608 ANLNQ9NQW6 1124 aa3.88□□□□□ -1.79
HDAC6-212ENST00000461608 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.88□□□□□ -1.79
HDAC6-212ENST00000461608 RBPJLQ9UBG7 517 aa3.88□□□□□ -1.79
HDAC6-212ENST00000461608 CROTQ9UKG9 612 aa3.88□□□□□ -1.79
HDAC6-212ENST00000461608 A0A1B0GTL3 188 aa3.87□□□□□ -1.79
HDAC6-212ENST00000461608 ANO9A1A5B4 782 aa3.87□□□□□ -1.79
HDAC6-212ENST00000461608 NRP1O14786 923 aa3.87□□□□□ -1.79
HDAC6-212ENST00000461608 DAPK3O43293 454 aa3.87□□□□□ -1.79
HDAC6-212ENST00000461608 AP1G1O43747 822 aa3.87□□□□□ -1.79
HDAC6-212ENST00000461608 PRICKLE3O43900 615 aaPredicted RBP3.87□□□□□ -1.79
HDAC6-212ENST00000461608 CTNND1O60716 968 aaKnown RBP3.87□□□□□ -1.79
HDAC6-212ENST00000461608 EIF3JO75822 258 aaKnown RBP3.87□□□□□ -1.79
HDAC6-212ENST00000461608 ARIH2O95376 493 aa3.87□□□□□ -1.79
HDAC6-212ENST00000461608 ZBED1O96006 694 aa3.87□□□□□ -1.79
HDAC6-212ENST00000461608 HMGCRP04035 888 aa3.87□□□□□ -1.79
HDAC6-212ENST00000461608 LTA4HP09960 611 aaKnown RBP3.87□□□□□ -1.79
HDAC6-212ENST00000461608 NBPF7P0C2Y1 421 aaPredicted RBP3.87□□□□□ -1.79
HDAC6-212ENST00000461608 ZNF28P17035 718 aa3.87□□□□□ -1.79
HDAC6-212ENST00000461608 PDCP20941 246 aa3.87□□□□□ -1.79
HDAC6-212ENST00000461608 RPL13P26373 211 aaKnown RBP3.87□□□□□ -1.79
HDAC6-212ENST00000461608 MEOX1P50221 254 aa3.87□□□□□ -1.79
HDAC6-212ENST00000461608 CACNB3P54284 484 aa3.87□□□□□ -1.79
HDAC6-212ENST00000461608 FAM193AP78312 1265 aa3.87□□□□□ -1.79
HDAC6-212ENST00000461608 MGAT5Q09328 741 aa3.87□□□□□ -1.79
HDAC6-212ENST00000461608 TOP3AQ13472 1001 aaPredicted RBP3.87□□□□□ -1.79
HDAC6-212ENST00000461608 PICALMQ13492 652 aa3.87□□□□□ -1.79
HDAC6-212ENST00000461608 SAFBQ15424 915 aaKnown RBP eCLIP3.87□□□□□ -1.79
HDAC6-212ENST00000461608 PRR31Q5SQ13 230 aa3.87□□□□□ -1.79
HDAC6-212ENST00000461608 PPP4R4Q6NUP7 873 aa3.87□□□□□ -1.79
HDAC6-212ENST00000461608 TRMT10BQ6PF06 316 aaKnown RBP3.87□□□□□ -1.79
HDAC6-212ENST00000461608 GAREM2Q75VX8 874 aa3.87□□□□□ -1.79
HDAC6-212ENST00000461608 CHST15Q7LFX5 561 aaPredicted RBP3.87□□□□□ -1.79
HDAC6-212ENST00000461608 TTC7BQ86TV6 843 aa3.87□□□□□ -1.79
HDAC6-212ENST00000461608 RTKN2Q8IZC4 609 aa3.87□□□□□ -1.79
HDAC6-212ENST00000461608 CAMKK1Q8N5S9 505 aa3.87□□□□□ -1.79
HDAC6-212ENST00000461608 NKD2Q969F2 451 aaPredicted RBP3.87□□□□□ -1.79
HDAC6-212ENST00000461608 FAM167AQ96KS9 214 aa3.87□□□□□ -1.79
HDAC6-212ENST00000461608 LRGUKQ96M69 825 aa3.87□□□□□ -1.79
HDAC6-212ENST00000461608 WDR26Q9H7D7 661 aa3.87□□□□□ -1.79
HDAC6-212ENST00000461608 C14orf93Q9H972 538 aaKnown RBP3.87□□□□□ -1.79
HDAC6-212ENST00000461608 L2HGDHQ9H9P8 463 aa3.87□□□□□ -1.79
HDAC6-212ENST00000461608 SLC52A1Q9NWF4 448 aa3.87□□□□□ -1.79
HDAC6-212ENST00000461608 NTMQ9P121 344 aa3.87□□□□□ -1.79
HDAC6-212ENST00000461608 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.87□□□□□ -1.79
HDAC6-212ENST00000461608 PTPN22Q9Y2R2 807 aa3.87□□□□□ -1.79
HDAC6-212ENST00000461608 FRMPD2Q68DX3 1309 aaPredicted RBP3.87□□□□□ -1.79
HDAC6-212ENST00000461608 RPTORQ8N122 1335 aa3.87□□□□□ -1.79
HDAC6-212ENST00000461608 A0A1W2PR48 441 aa3.86□□□□□ -1.79
HDAC6-212ENST00000461608 PLEKHD1A6NEE1 506 aa3.86□□□□□ -1.79
HDAC6-212ENST00000461608 C9orf118A6NHY6 69 aa3.86□□□□□ -1.79
HDAC6-212ENST00000461608 MATN3O15232 486 aa3.86□□□□□ -1.79
HDAC6-212ENST00000461608 MTSS1O43312 755 aa3.86□□□□□ -1.79
HDAC6-212ENST00000461608 HTRA2O43464 458 aaPredicted RBP3.86□□□□□ -1.79
HDAC6-212ENST00000461608 COL6A1P12109 1028 aa3.86□□□□□ -1.79
HDAC6-212ENST00000461608 C6P13671 934 aa3.86□□□□□ -1.79
HDAC6-212ENST00000461608 ECHS1P30084 290 aa3.86□□□□□ -1.79
HDAC6-212ENST00000461608 ADAM17P78536 824 aa3.86□□□□□ -1.79
HDAC6-212ENST00000461608 MST1LQ2TV78 715 aa3.86□□□□□ -1.79
HDAC6-212ENST00000461608 ZNF568Q3ZCX4 644 aa3.86□□□□□ -1.79
HDAC6-212ENST00000461608 VWA3BQ502W6 1294 aa3.86□□□□□ -1.79
HDAC6-212ENST00000461608 C19orf54Q5BKX5 351 aa3.86□□□□□ -1.79
HDAC6-212ENST00000461608 ZMAT1Q5H9K5 638 aa3.86□□□□□ -1.79
HDAC6-212ENST00000461608 FAM26FQ5R3K3 315 aa3.86□□□□□ -1.79
HDAC6-212ENST00000461608 GPR156Q8NFN8 814 aa3.86□□□□□ -1.79
HDAC6-212ENST00000461608 PJA1Q8NG27 643 aa3.86□□□□□ -1.79
HDAC6-212ENST00000461608 SVIPQ8NHG7 77 aa3.86□□□□□ -1.79
HDAC6-212ENST00000461608 ZNF480Q8WV37 535 aa3.86□□□□□ -1.79
HDAC6-212ENST00000461608 MTFMTQ96DP5 389 aaKnown RBP3.86□□□□□ -1.79
HDAC6-212ENST00000461608 CYFIP2Q96F07 1278 aa3.86□□□□□ -1.79
HDAC6-212ENST00000461608 UIMC1Q96RL1 719 aa3.86□□□□□ -1.79
HDAC6-212ENST00000461608 C7orf25Q9BPX7 421 aa3.86□□□□□ -1.79
HDAC6-212ENST00000461608 KATNBL1Q9H079 304 aa3.86□□□□□ -1.79
HDAC6-212ENST00000461608 TMEM60Q9H2L4 133 aa3.86□□□□□ -1.79
HDAC6-212ENST00000461608 BARX1Q9HBU1 254 aaPredicted RBP3.86□□□□□ -1.79
HDAC6-212ENST00000461608 JADE2Q9NQC1 790 aa3.86□□□□□ -1.79
HDAC6-212ENST00000461608 DDX21Q9NR30 783 aaKnown RBP eCLIP3.86□□□□□ -1.79
HDAC6-212ENST00000461608 DNM3Q9UQ16 869 aa3.86□□□□□ -1.79
HDAC6-212ENST00000461608 POLHQ9Y253 713 aa3.86□□□□□ -1.79
HDAC6-212ENST00000461608 IPPQ9Y573 584 aa3.86□□□□□ -1.79
HDAC6-212ENST00000461608 A0A0A6YYK5 440 aaPredicted RBP3.85□□□□□ -1.79
HDAC6-212ENST00000461608 SH3D21A4FU49 640 aa3.85□□□□□ -1.79
HDAC6-212ENST00000461608 LY86O95711 162 aa3.85□□□□□ -1.79
HDAC6-212ENST00000461608 MAP4K4O95819 1239 aaPredicted RBP3.85□□□□□ -1.79
HDAC6-212ENST00000461608 GASTP01350 101 aa3.85□□□□□ -1.79
HDAC6-212ENST00000461608 CRHR1P34998 444 aa3.85□□□□□ -1.79
HDAC6-212ENST00000461608 ADCY8P40145 1251 aa3.85□□□□□ -1.79
HDAC6-212ENST00000461608 RHBDL3P58872 404 aa3.85□□□□□ -1.79
HDAC6-212ENST00000461608 CDC42EP1Q00587 391 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms