RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 SUMF1Q8NBK3 374 aa15.4■□□□□ 0.06
PABPC4-208ENST00000461578 RDM1Q8NG50 284 aa15.4■□□□□ 0.06
PABPC4-208ENST00000461578 YTHDC1Q96MU7 727 aaKnown RBP15.4■□□□□ 0.06
PABPC4-208ENST00000461578 RPP25Q9BUL9 199 aaKnown RBP15.4■□□□□ 0.06
PABPC4-208ENST00000461578 CEP250Q9BV73 2442 aa15.4■□□□□ 0.06
PABPC4-208ENST00000461578 CACNA1BQ00975 2339 aa15.4■□□□□ 0.06
PABPC4-208ENST00000461578 MIA3Q5JRA6 1907 aa15.39■□□□□ 0.05
PABPC4-208ENST00000461578 TGM5O43548 720 aa15.39■□□□□ 0.05
PABPC4-208ENST00000461578 TDP2O95551 362 aa15.39■□□□□ 0.05
PABPC4-208ENST00000461578 RPL17P18621 184 aaKnown RBP15.39■□□□□ 0.05
PABPC4-208ENST00000461578 NCLP19338 710 aaKnown RBP15.39■□□□□ 0.05
PABPC4-208ENST00000461578 HOXA11P31270 313 aaPredicted RBP15.39■□□□□ 0.05
PABPC4-208ENST00000461578 MLH1P40692 756 aa15.39■□□□□ 0.05
PABPC4-208ENST00000461578 SCNN1GP51170 649 aa15.39■□□□□ 0.05
PABPC4-208ENST00000461578 USP11P51784 963 aa15.39■□□□□ 0.05
PABPC4-208ENST00000461578 RCAN1P53805 252 aa15.39■□□□□ 0.05
PABPC4-208ENST00000461578 GPC5P78333 572 aa15.39■□□□□ 0.05
PABPC4-208ENST00000461578 DSG1Q02413 1049 aa15.39■□□□□ 0.05
PABPC4-208ENST00000461578 RNF168Q8IYW5 571 aaPredicted RBP15.39■□□□□ 0.05
PABPC4-208ENST00000461578 MAML2Q8IZL2 1156 aaPredicted RBP15.39■□□□□ 0.05
PABPC4-208ENST00000461578 SMG8Q8ND04 991 aaKnown RBP15.39■□□□□ 0.05
PABPC4-208ENST00000461578 CCDC148Q8NFR7 591 aa15.39■□□□□ 0.05
PABPC4-208ENST00000461578 TBCKQ8TEA7 893 aa15.39■□□□□ 0.05
PABPC4-208ENST00000461578 TMEM143Q96AN5 459 aa15.39■□□□□ 0.05
PABPC4-208ENST00000461578 GAD1Q99259 594 aa15.39■□□□□ 0.05
PABPC4-208ENST00000461578 JPH2Q9BR39 696 aaPredicted RBP15.39■□□□□ 0.05
PABPC4-208ENST00000461578 APOL6Q9BWW8 343 aa15.39■□□□□ 0.05
PABPC4-208ENST00000461578 SLC26A6Q9BXS9 759 aa15.39■□□□□ 0.05
PABPC4-208ENST00000461578 RHOBTB2Q9BYZ6 727 aa15.39■□□□□ 0.05
PABPC4-208ENST00000461578 RNF39Q9H2S5 420 aa15.39■□□□□ 0.05
PABPC4-208ENST00000461578 RXFP1Q9HBX9 757 aa15.39■□□□□ 0.05
PABPC4-208ENST00000461578 SLC2A4RGQ9NR83 387 aa15.39■□□□□ 0.05
PABPC4-208ENST00000461578 SPATA6Q9NWH7 488 aaPredicted RBP15.39■□□□□ 0.05
PABPC4-208ENST00000461578 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.39■□□□□ 0.05
PABPC4-208ENST00000461578 NCDNQ9UBB6 729 aa15.39■□□□□ 0.05
PABPC4-208ENST00000461578 HES2Q9Y543 173 aa15.39■□□□□ 0.05
PABPC4-208ENST00000461578 MYH15Q9Y2K3 1946 aa15.39■□□□□ 0.05
PABPC4-208ENST00000461578 MTCL1Q9Y4B5 1905 aaKnown RBP15.39■□□□□ 0.05
PABPC4-208ENST00000461578 ANHXE9PGG2 379 aa15.38■□□□□ 0.05
PABPC4-208ENST00000461578 PSMC5P62195 406 aa15.38■□□□□ 0.05
PABPC4-208ENST00000461578 SNW1Q13573 536 aaKnown RBP15.38■□□□□ 0.05
PABPC4-208ENST00000461578 Q6ZUG5 572 aa15.38■□□□□ 0.05
PABPC4-208ENST00000461578 SRGAP1Q7Z6B7 1085 aa15.38■□□□□ 0.05
PABPC4-208ENST00000461578 ZNF579Q8NAF0 562 aaKnown RBP15.38■□□□□ 0.05
PABPC4-208ENST00000461578 PRPF31Q8WWY3 499 aaKnown RBP15.38■□□□□ 0.05
PABPC4-208ENST00000461578 FGF14Q92915 247 aa15.38■□□□□ 0.05
PABPC4-208ENST00000461578 BRF1Q92994 677 aa15.38■□□□□ 0.05
PABPC4-208ENST00000461578 EIF2AQ9BY44 585 aaKnown RBP15.38■□□□□ 0.05
PABPC4-208ENST00000461578 PRKD2Q9BZL6 878 aa15.38■□□□□ 0.05
PABPC4-208ENST00000461578 PLEKHA4Q9H4M7 779 aa15.38■□□□□ 0.05
PABPC4-208ENST00000461578 MIOSQ9NXC5 875 aa15.38■□□□□ 0.05
PABPC4-208ENST00000461578 ZDHHC7Q9NXF8 308 aa15.38■□□□□ 0.05
PABPC4-208ENST00000461578 IPPQ9Y573 584 aa15.38■□□□□ 0.05
PABPC4-208ENST00000461578 TDRD15B5MCY1 1934 aaKnown RBP15.38■□□□□ 0.05
PABPC4-208ENST00000461578 DOCK6Q96HP0 2047 aa15.38■□□□□ 0.05
PABPC4-208ENST00000461578 ARL5CA6NH57 179 aa15.37■□□□□ 0.05
PABPC4-208ENST00000461578 LAMTOR5O43504 91 aa15.37■□□□□ 0.05
PABPC4-208ENST00000461578 ERLIN2O94905 339 aa15.37■□□□□ 0.05
PABPC4-208ENST00000461578 EFEMP2O95967 443 aa15.37■□□□□ 0.05
PABPC4-208ENST00000461578 FSHRP23945 695 aa15.37■□□□□ 0.05
PABPC4-208ENST00000461578 NLRP5P59047 1200 aa15.37■□□□□ 0.05
PABPC4-208ENST00000461578 STARD6P59095 220 aa15.37■□□□□ 0.05
PABPC4-208ENST00000461578 NTHL1P78549 312 aa15.37■□□□□ 0.05
PABPC4-208ENST00000461578 UBXN2BQ14CS0 331 aa15.37■□□□□ 0.05
PABPC4-208ENST00000461578 Q4G0T1 1027 aa15.37■□□□□ 0.05
PABPC4-208ENST00000461578 VARS2Q5ST30 1063 aaKnown RBP15.37■□□□□ 0.05
PABPC4-208ENST00000461578 PARM1Q6UWI2 310 aa15.37■□□□□ 0.05
PABPC4-208ENST00000461578 B3GNT9Q6UX72 402 aa15.37■□□□□ 0.05
PABPC4-208ENST00000461578 HDAC7Q8WUI4 952 aa15.37■□□□□ 0.05
PABPC4-208ENST00000461578 PSPC1Q8WXF1 523 aaKnown RBP15.37■□□□□ 0.05
PABPC4-208ENST00000461578 SLC7A3Q8WY07 619 aa15.37■□□□□ 0.05
PABPC4-208ENST00000461578 RABGGTAQ92696 567 aa15.37■□□□□ 0.05
PABPC4-208ENST00000461578 SHDQ96IW2 340 aa15.37■□□□□ 0.05
PABPC4-208ENST00000461578 CPB2Q96IY4 423 aa15.37■□□□□ 0.05
PABPC4-208ENST00000461578 CEP170P1Q96L14 293 aa15.37■□□□□ 0.05
PABPC4-208ENST00000461578 ZFP42Q96MM3 310 aa15.37■□□□□ 0.05
PABPC4-208ENST00000461578 GPR62Q9BZJ7 368 aa15.37■□□□□ 0.05
PABPC4-208ENST00000461578 MTF2Q9Y483 593 aaPredicted RBP15.37■□□□□ 0.05
PABPC4-208ENST00000461578 EML1O00423 815 aa15.36■□□□□ 0.05
PABPC4-208ENST00000461578 NR1I2O75469 434 aa15.36■□□□□ 0.05
PABPC4-208ENST00000461578 IRX6P78412 446 aaPredicted RBP15.36■□□□□ 0.05
PABPC4-208ENST00000461578 CSTF1Q05048 431 aaKnown RBP15.36■□□□□ 0.05
PABPC4-208ENST00000461578 DSC1Q08554 894 aa15.36■□□□□ 0.05
PABPC4-208ENST00000461578 LAMTOR4Q0VGL1 99 aa15.36■□□□□ 0.05
PABPC4-208ENST00000461578 KRT32Q14532 448 aa15.36■□□□□ 0.05
PABPC4-208ENST00000461578 FUT10Q6P4F1 479 aa15.36■□□□□ 0.05
PABPC4-208ENST00000461578 GRASPQ7Z6J2 395 aaPredicted RBP15.36■□□□□ 0.05
PABPC4-208ENST00000461578 RNF149Q8NC42 400 aa15.36■□□□□ 0.05
PABPC4-208ENST00000461578 BCO2Q9BYV7 579 aa15.36■□□□□ 0.05
PABPC4-208ENST00000461578 UBN1Q9NPG3 1134 aa15.36■□□□□ 0.05
PABPC4-208ENST00000461578 CHST7Q9NS84 486 aa15.36■□□□□ 0.05
PABPC4-208ENST00000461578 GPR179Q6PRD1 2367 aa15.36■□□□□ 0.05
PABPC4-208ENST00000461578 PATJQ8NI35 1801 aa15.36■□□□□ 0.05
PABPC4-208ENST00000461578 KANSL1LA0AUZ9 987 aa15.35■□□□□ 0.05
PABPC4-208ENST00000461578 ZMYND10O75800 440 aa15.35■□□□□ 0.05
PABPC4-208ENST00000461578 CD72P21854 359 aa15.35■□□□□ 0.05
PABPC4-208ENST00000461578 ATXN1P54253 815 aaKnown RBP15.35■□□□□ 0.05
PABPC4-208ENST00000461578 MLF2Q15773 248 aaPredicted RBP15.35■□□□□ 0.05
PABPC4-208ENST00000461578 USP41Q3LFD5 358 aa15.35■□□□□ 0.05
PABPC4-208ENST00000461578 TSGA10IPQ3SY00 556 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms