RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 ZNF623O75123 536 aa20.39■□□□□ 0.85
COL9A2-205ENST00000461118 SKIP12755 728 aa20.39■□□□□ 0.85
COL9A2-205ENST00000461118 HOXB8P17481 243 aaPredicted RBP20.39■□□□□ 0.85
COL9A2-205ENST00000461118 CYP11B2P19099 503 aa20.39■□□□□ 0.85
COL9A2-205ENST00000461118 GLRA2P23416 452 aa20.39■□□□□ 0.85
COL9A2-205ENST00000461118 SP100P23497 879 aaPredicted RBP20.39■□□□□ 0.85
COL9A2-205ENST00000461118 HOXA11P31270 313 aaPredicted RBP20.39■□□□□ 0.85
COL9A2-205ENST00000461118 CAPSQ13938 189 aa20.39■□□□□ 0.85
COL9A2-205ENST00000461118 PADI6Q6TGC4 694 aa20.39■□□□□ 0.85
COL9A2-205ENST00000461118 KCTD17Q8N5Z5 321 aa20.39■□□□□ 0.85
COL9A2-205ENST00000461118 ASAP3Q8TDY4 903 aa20.39■□□□□ 0.85
COL9A2-205ENST00000461118 ENTPD7Q9NQZ7 604 aa20.39■□□□□ 0.85
COL9A2-205ENST00000461118 HCFC2Q9Y5Z7 792 aa20.39■□□□□ 0.85
COL9A2-205ENST00000461118 VPS13AQ96RL7 3174 aa20.39■□□□□ 0.85
COL9A2-205ENST00000461118 SPTBN4Q9H254 2564 aa20.39■□□□□ 0.85
COL9A2-205ENST00000461118 VPS37CA5D8V6 355 aaPredicted RBP20.38■□□□□ 0.85
COL9A2-205ENST00000461118 ARHGEF35A5YM69 484 aa20.38■□□□□ 0.85
COL9A2-205ENST00000461118 C2orf71A6NGG8 1288 aa20.38■□□□□ 0.85
COL9A2-205ENST00000461118 BMP15O95972 392 aa20.38■□□□□ 0.85
COL9A2-205ENST00000461118 SRGAP2BP0DMP2 458 aa20.38■□□□□ 0.85
COL9A2-205ENST00000461118 RAB27AP51159 221 aa20.38■□□□□ 0.85
COL9A2-205ENST00000461118 TWF2Q6IBS0 349 aaKnown RBP20.38■□□□□ 0.85
COL9A2-205ENST00000461118 SLC39A11Q8N1S5 342 aa20.38■□□□□ 0.85
COL9A2-205ENST00000461118 LRRC43Q8N309 656 aa20.38■□□□□ 0.85
COL9A2-205ENST00000461118 MRPL43Q8N983 215 aaKnown RBP20.38■□□□□ 0.85
COL9A2-205ENST00000461118 RSPH1Q8WYR4 309 aa20.38■□□□□ 0.85
COL9A2-205ENST00000461118 ZNF558Q96NG5 402 aa20.38■□□□□ 0.85
COL9A2-205ENST00000461118 MMTAG2Q9BU76 263 aaKnown RBP20.38■□□□□ 0.85
COL9A2-205ENST00000461118 POLR3FQ9H1D9 316 aaPredicted RBP20.38■□□□□ 0.85
COL9A2-205ENST00000461118 POMKQ9H5K3 350 aa20.38■□□□□ 0.85
COL9A2-205ENST00000461118 DDX19AQ9NUU7 478 aaKnown RBP20.38■□□□□ 0.85
COL9A2-205ENST00000461118 PUF60Q9UHX1 559 aaKnown RBP20.38■□□□□ 0.85
COL9A2-205ENST00000461118 PP2D1A8MPX8 630 aa20.37■□□□□ 0.85
COL9A2-205ENST00000461118 GFRA3O60609 400 aa20.37■□□□□ 0.85
COL9A2-205ENST00000461118 BRD1O95696 1058 aa20.37■□□□□ 0.85
COL9A2-205ENST00000461118 CDC25AP30304 524 aa20.37■□□□□ 0.85
COL9A2-205ENST00000461118 AXLP30530 894 aa20.37■□□□□ 0.85
COL9A2-205ENST00000461118 PPM1AP35813 382 aa20.37■□□□□ 0.85
COL9A2-205ENST00000461118 HYIQ5T013 277 aa20.37■□□□□ 0.85
COL9A2-205ENST00000461118 KREMEN2Q8NCW0 462 aa20.37■□□□□ 0.85
COL9A2-205ENST00000461118 BHMT2Q9H2M3 363 aa20.37■□□□□ 0.85
COL9A2-205ENST00000461118 ADAM7Q9H2U9 754 aa20.37■□□□□ 0.85
COL9A2-205ENST00000461118 SMOC2Q9H3U7 446 aa20.37■□□□□ 0.85
COL9A2-205ENST00000461118 GPRC5CQ9NQ84 441 aa20.37■□□□□ 0.85
COL9A2-205ENST00000461118 FAM105AQ9NUU6 356 aa20.37■□□□□ 0.85
COL9A2-205ENST00000461118 SPG21Q9NZD8 308 aa20.37■□□□□ 0.85
COL9A2-205ENST00000461118 DNM3Q9UQ16 869 aa20.37■□□□□ 0.85
COL9A2-205ENST00000461118 VWA3AA6NCI4 1184 aa20.36■□□□□ 0.85
COL9A2-205ENST00000461118 C2CD4DB7Z1M9 353 aa20.36■□□□□ 0.85
COL9A2-205ENST00000461118 H0Y858 1186 aa20.36■□□□□ 0.85
COL9A2-205ENST00000461118 CLASP2O75122 1294 aaKnown RBP20.36■□□□□ 0.85
COL9A2-205ENST00000461118 MBTD1Q05BQ5 628 aa20.36■□□□□ 0.85
COL9A2-205ENST00000461118 TMC7Q7Z402 723 aa20.36■□□□□ 0.85
COL9A2-205ENST00000461118 MRPL10Q7Z7H8 261 aaKnown RBP20.36■□□□□ 0.85
COL9A2-205ENST00000461118 FEZF2Q8TBJ5 459 aa20.36■□□□□ 0.85
COL9A2-205ENST00000461118 CASP10Q92851 521 aa20.36■□□□□ 0.85
COL9A2-205ENST00000461118 AK8Q96MA6 479 aa20.36■□□□□ 0.85
COL9A2-205ENST00000461118 PROB1E7EW31 1015 aa20.35■□□□□ 0.85
COL9A2-205ENST00000461118 INO80B-WBP1J3KQ70 363 aa20.35■□□□□ 0.85
COL9A2-205ENST00000461118 TSPAN1O60635 241 aa20.35■□□□□ 0.85
COL9A2-205ENST00000461118 ERLIN2O94905 339 aa20.35■□□□□ 0.85
COL9A2-205ENST00000461118 KRT17Q04695 432 aa20.35■□□□□ 0.85
COL9A2-205ENST00000461118 NCBP1Q09161 790 aaKnown RBP20.35■□□□□ 0.85
COL9A2-205ENST00000461118 AMHR2Q16671 573 aa20.35■□□□□ 0.85
COL9A2-205ENST00000461118 UBXN11Q5T124 520 aa20.35■□□□□ 0.85
COL9A2-205ENST00000461118 MAEAQ7L5Y9 396 aa20.35■□□□□ 0.85
COL9A2-205ENST00000461118 ABI1Q8IZP0 508 aa20.35■□□□□ 0.85
COL9A2-205ENST00000461118 RNF169Q8NCN4 708 aa20.35■□□□□ 0.85
COL9A2-205ENST00000461118 SORCS3Q9UPU3 1222 aa20.35■□□□□ 0.85
COL9A2-205ENST00000461118 MTMR6Q9Y217 621 aa20.35■□□□□ 0.85
COL9A2-205ENST00000461118 E9PMD0 336 aa20.34■□□□□ 0.85
COL9A2-205ENST00000461118 SLC26A4O43511 780 aa20.34■□□□□ 0.85
COL9A2-205ENST00000461118 GALR2O43603 387 aaPredicted RBP20.34■□□□□ 0.85
COL9A2-205ENST00000461118 NUBP1P53384 320 aa20.34■□□□□ 0.85
COL9A2-205ENST00000461118 ITIH3Q06033 890 aa20.34■□□□□ 0.85
COL9A2-205ENST00000461118 RESTQ13127 1097 aa20.34■□□□□ 0.85
COL9A2-205ENST00000461118 SMC1AQ14683 1233 aaKnown RBP20.34■□□□□ 0.85
COL9A2-205ENST00000461118 SF3A1Q15459 793 aaKnown RBP20.34■□□□□ 0.85
COL9A2-205ENST00000461118 CDCA2Q69YH5 1023 aaPredicted RBP20.34■□□□□ 0.85
COL9A2-205ENST00000461118 KANK3Q6NY19 840 aa20.34■□□□□ 0.85
COL9A2-205ENST00000461118 TMEM173Q86WV6 379 aaPredicted RBP20.34■□□□□ 0.85
COL9A2-205ENST00000461118 TMEM105Q8N8V8 129 aa20.34■□□□□ 0.85
COL9A2-205ENST00000461118 HELQQ8TDG4 1101 aa20.34■□□□□ 0.85
COL9A2-205ENST00000461118 ATOH1Q92858 354 aaPredicted RBP20.34■□□□□ 0.85
COL9A2-205ENST00000461118 PGBD4Q96DM1 585 aa20.34■□□□□ 0.85
COL9A2-205ENST00000461118 CCDC51Q96ER9 411 aa20.34■□□□□ 0.85
COL9A2-205ENST00000461118 NT5C3AQ9H0P0 336 aa20.34■□□□□ 0.85
COL9A2-205ENST00000461118 NR2E1Q9Y466 385 aa20.34■□□□□ 0.85
COL9A2-205ENST00000461118 PCDHB2Q9Y5E7 798 aa20.34■□□□□ 0.85
COL9A2-205ENST00000461118 NT5C1B-RDH14C9J2C7 533 aa20.33■□□□□ 0.85
COL9A2-205ENST00000461118 STX6O43752 255 aa20.33■□□□□ 0.85
COL9A2-205ENST00000461118 WEE2P0C1S8 567 aa20.33■□□□□ 0.85
COL9A2-205ENST00000461118 NAMPTP43490 491 aa20.33■□□□□ 0.85
COL9A2-205ENST00000461118 MTMR3Q13615 1198 aa20.33■□□□□ 0.85
COL9A2-205ENST00000461118 TPRNQ4KMQ1 711 aa20.33■□□□□ 0.85
COL9A2-205ENST00000461118 NOTUMQ6P988 496 aa20.33■□□□□ 0.85
COL9A2-205ENST00000461118 PPP4R3CPQ6ZMV5 832 aa20.33■□□□□ 0.85
COL9A2-205ENST00000461118 KCNK18Q7Z418 384 aa20.33■□□□□ 0.85
COL9A2-205ENST00000461118 HSCBQ8IWL3 235 aa20.33■□□□□ 0.85
COL9A2-205ENST00000461118 UBALD2Q8IYN6 164 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms