RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 UBXN11Q5T124 520 aa11.08□□□□□ -0.64
ATG4A-206ENST00000457035 ZNF598Q86UK7 904 aaKnown RBP11.08□□□□□ -0.64
ATG4A-206ENST00000457035 MYCT1Q8N699 235 aa11.08□□□□□ -0.64
ATG4A-206ENST00000457035 FSIP1Q8NA03 581 aa11.08□□□□□ -0.64
ATG4A-206ENST00000457035 TMEM87AQ8NBN3 555 aa11.08□□□□□ -0.64
ATG4A-206ENST00000457035 TMEM161BQ8NDZ6 487 aa11.08□□□□□ -0.64
ATG4A-206ENST00000457035 ENGASEQ8NFI3 743 aa11.08□□□□□ -0.64
ATG4A-206ENST00000457035 MRPS27Q92552 414 aaKnown RBP11.08□□□□□ -0.64
ATG4A-206ENST00000457035 PRIMPOLQ96LW4 560 aa11.08□□□□□ -0.64
ATG4A-206ENST00000457035 RAD9AQ99638 391 aa11.08□□□□□ -0.64
ATG4A-206ENST00000457035 TRIM9Q9C026 710 aa11.08□□□□□ -0.64
ATG4A-206ENST00000457035 MAGEF1Q9HAY2 307 aa11.08□□□□□ -0.64
ATG4A-206ENST00000457035 PRMT7Q9NVM4 692 aaPredicted RBP11.08□□□□□ -0.64
ATG4A-206ENST00000457035 DACT1Q9NYF0 836 aa11.08□□□□□ -0.64
ATG4A-206ENST00000457035 USP25Q9UHP3 1055 aa11.08□□□□□ -0.64
ATG4A-206ENST00000457035 PIN4Q9Y237 131 aaKnown RBP11.08□□□□□ -0.64
ATG4A-206ENST00000457035 USP20Q9Y2K6 914 aa11.08□□□□□ -0.64
ATG4A-206ENST00000457035 PCDHA11Q9Y5I1 949 aa11.08□□□□□ -0.64
ATG4A-206ENST00000457035 CITO14578 2027 aa11.08□□□□□ -0.64
ATG4A-206ENST00000457035 TRAK2O60296 914 aa11.07□□□□□ -0.64
ATG4A-206ENST00000457035 GADD45BO75293 160 aaPredicted RBP11.07□□□□□ -0.64
ATG4A-206ENST00000457035 DGKIO75912 1065 aa11.07□□□□□ -0.64
ATG4A-206ENST00000457035 ERLIN2O94905 339 aa11.07□□□□□ -0.64
ATG4A-206ENST00000457035 PRKCBP05771 671 aa11.07□□□□□ -0.64
ATG4A-206ENST00000457035 MAPTP10636 758 aaKnown RBP11.07□□□□□ -0.64
ATG4A-206ENST00000457035 MYOGP15173 224 aa11.07□□□□□ -0.64
ATG4A-206ENST00000457035 ATF7P17544 494 aaPredicted RBP11.07□□□□□ -0.64
ATG4A-206ENST00000457035 NCKAP1LP55160 1127 aa11.07□□□□□ -0.64
ATG4A-206ENST00000457035 SNW1Q13573 536 aaKnown RBP11.07□□□□□ -0.64
ATG4A-206ENST00000457035 NT5DC1Q5TFE4 455 aa11.07□□□□□ -0.64
ATG4A-206ENST00000457035 FAM117BQ6P1L5 589 aa11.07□□□□□ -0.64
ATG4A-206ENST00000457035 ZNF720Q7Z2F6 126 aa11.07□□□□□ -0.64
ATG4A-206ENST00000457035 HAUS6Q7Z4H7 955 aa11.07□□□□□ -0.64
ATG4A-206ENST00000457035 MRPL10Q7Z7H8 261 aaKnown RBP11.07□□□□□ -0.64
ATG4A-206ENST00000457035 ECHDC2Q86YB7 292 aa11.07□□□□□ -0.64
ATG4A-206ENST00000457035 NPAS4Q8IUM7 802 aa11.07□□□□□ -0.64
ATG4A-206ENST00000457035 FMR1NBQ8N0W7 255 aaPredicted RBP11.07□□□□□ -0.64
ATG4A-206ENST00000457035 ZNF689Q96CS4 500 aaPredicted RBP11.07□□□□□ -0.64
ATG4A-206ENST00000457035 PAGE5Q96GU1 130 aa11.07□□□□□ -0.64
ATG4A-206ENST00000457035 CPB2Q96IY4 423 aa11.07□□□□□ -0.64
ATG4A-206ENST00000457035 LRRC27Q9C0I9 530 aa11.07□□□□□ -0.64
ATG4A-206ENST00000457035 ELAC1Q9H777 363 aaKnown RBP11.07□□□□□ -0.64
ATG4A-206ENST00000457035 RC3H2Q9HBD1 1191 aaKnown RBP11.07□□□□□ -0.64
ATG4A-206ENST00000457035 YBX2Q9Y2T7 364 aaKnown RBP11.07□□□□□ -0.64
ATG4A-206ENST00000457035 INSL6Q9Y581 213 aa11.07□□□□□ -0.64
ATG4A-206ENST00000457035 PCDHB7Q9Y5E2 793 aa11.07□□□□□ -0.64
ATG4A-206ENST00000457035 NLRC5Q86WI3 1866 aa11.06□□□□□ -0.64
ATG4A-206ENST00000457035 COL4A6Q14031 1691 aa11.06□□□□□ -0.64
ATG4A-206ENST00000457035 GOLGA6L4A6NEF3 574 aa11.06□□□□□ -0.64
ATG4A-206ENST00000457035 TLL1O43897 1013 aa11.06□□□□□ -0.64
ATG4A-206ENST00000457035 TBCAO75347 108 aaKnown RBP11.06□□□□□ -0.64
ATG4A-206ENST00000457035 EOMESO95936 686 aa11.06□□□□□ -0.64
ATG4A-206ENST00000457035 STAG3L1P0CL83 205 aa11.06□□□□□ -0.64
ATG4A-206ENST00000457035 IDEP14735 1019 aa11.06□□□□□ -0.64
ATG4A-206ENST00000457035 CASP1P29466 404 aa11.06□□□□□ -0.64
ATG4A-206ENST00000457035 NMT1P30419 496 aaKnown RBP11.06□□□□□ -0.64
ATG4A-206ENST00000457035 AFMP43652 599 aa11.06□□□□□ -0.64
ATG4A-206ENST00000457035 GTF2BQ00403 316 aa11.06□□□□□ -0.64
ATG4A-206ENST00000457035 NCBP1Q09161 790 aaKnown RBP11.06□□□□□ -0.64
ATG4A-206ENST00000457035 PRPF4BQ13523 1007 aaKnown RBP11.06□□□□□ -0.64
ATG4A-206ENST00000457035 CSPP1Q1MSJ5 1256 aa11.06□□□□□ -0.64
ATG4A-206ENST00000457035 HERC4Q5GLZ8 1057 aaPredicted RBP11.06□□□□□ -0.64
ATG4A-206ENST00000457035 TWF2Q6IBS0 349 aaKnown RBP11.06□□□□□ -0.64
ATG4A-206ENST00000457035 NOTUMQ6P988 496 aa11.06□□□□□ -0.64
ATG4A-206ENST00000457035 KRBA2Q6ZNG9 492 aa11.06□□□□□ -0.64
ATG4A-206ENST00000457035 CDR2LQ86X02 465 aaPredicted RBP11.06□□□□□ -0.64
ATG4A-206ENST00000457035 SFR1Q86XK3 245 aa11.06□□□□□ -0.64
ATG4A-206ENST00000457035 GRAMD1CQ8IYS0 662 aa11.06□□□□□ -0.64
ATG4A-206ENST00000457035 CEP57L1Q8IYX8 460 aa11.06□□□□□ -0.64
ATG4A-206ENST00000457035 SMG8Q8ND04 991 aaKnown RBP11.06□□□□□ -0.64
ATG4A-206ENST00000457035 CCDC51Q96ER9 411 aa11.06□□□□□ -0.64
ATG4A-206ENST00000457035 ACO2Q99798 780 aaKnown RBP11.06□□□□□ -0.64
ATG4A-206ENST00000457035 ZBED2Q9BTP6 218 aa11.06□□□□□ -0.64
ATG4A-206ENST00000457035 STRA6Q9BX79 667 aa11.06□□□□□ -0.64
ATG4A-206ENST00000457035 EIF2AQ9BY44 585 aaKnown RBP11.06□□□□□ -0.64
ATG4A-206ENST00000457035 BLZF1Q9H2G9 400 aa11.06□□□□□ -0.64
ATG4A-206ENST00000457035 ST6GALNAC4Q9H4F1 302 aa11.06□□□□□ -0.64
ATG4A-206ENST00000457035 ZHX3Q9H4I2 956 aa11.06□□□□□ -0.64
ATG4A-206ENST00000457035 PTPRHQ9HD43 1115 aa11.06□□□□□ -0.64
ATG4A-206ENST00000457035 FAM105AQ9NUU6 356 aa11.06□□□□□ -0.64
ATG4A-206ENST00000457035 RNF19AQ9NV58 838 aa11.06□□□□□ -0.64
ATG4A-206ENST00000457035 PANK4Q9NVE7 773 aa11.06□□□□□ -0.64
ATG4A-206ENST00000457035 TMEM161AQ9NX61 479 aa11.06□□□□□ -0.64
ATG4A-206ENST00000457035 SEL1LQ9UBV2 794 aa11.06□□□□□ -0.64
ATG4A-206ENST00000457035 MSRAQ9UJ68 235 aa11.06□□□□□ -0.64
ATG4A-206ENST00000457035 PCDHB2Q9Y5E7 798 aa11.06□□□□□ -0.64
ATG4A-206ENST00000457035 CNTNAP2Q9UHC6 1331 aa11.06□□□□□ -0.64
ATG4A-206ENST00000457035 A0A0C4DFX4 3053 aa11.05□□□□□ -0.64
ATG4A-206ENST00000457035 LCHNA4D1U4 455 aa11.05□□□□□ -0.64
ATG4A-206ENST00000457035 H0YCG3 227 aa11.05□□□□□ -0.64
ATG4A-206ENST00000457035 KLRC4O43908 158 aa11.05□□□□□ -0.64
ATG4A-206ENST00000457035 ARHGEF15O94989 841 aa11.05□□□□□ -0.64
ATG4A-206ENST00000457035 SKIP12755 728 aa11.05□□□□□ -0.64
ATG4A-206ENST00000457035 GAP43P17677 238 aa11.05□□□□□ -0.64
ATG4A-206ENST00000457035 LIG1P18858 919 aa11.05□□□□□ -0.64
ATG4A-206ENST00000457035 SCP2P22307 547 aa11.05□□□□□ -0.64
ATG4A-206ENST00000457035 DNAJB2P25686 324 aa11.05□□□□□ -0.64
ATG4A-206ENST00000457035 EHHADHQ08426 723 aa11.05□□□□□ -0.64
ATG4A-206ENST00000457035 CUL4BQ13620 913 aa11.05□□□□□ -0.64
ATG4A-206ENST00000457035 RAB30Q15771 203 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms