RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 TARS2Q9BW92 718 aaKnown RBP16.04■□□□□ 0.16
NCKIPSD-207ENST00000453349 MSRAQ9UJ68 235 aa16.04■□□□□ 0.16
NCKIPSD-207ENST00000453349 EXOC7Q9UPT5 735 aa16.04■□□□□ 0.16
NCKIPSD-207ENST00000453349 TNFSF13BQ9Y275 285 aa16.04■□□□□ 0.16
NCKIPSD-207ENST00000453349 USP20Q9Y2K6 914 aa16.04■□□□□ 0.16
NCKIPSD-207ENST00000453349 INSL6Q9Y581 213 aa16.04■□□□□ 0.16
NCKIPSD-207ENST00000453349 PCDHB2Q9Y5E7 798 aa16.04■□□□□ 0.16
NCKIPSD-207ENST00000453349 TET1Q8NFU7 2136 aa16.04■□□□□ 0.16
NCKIPSD-207ENST00000453349 TTLL13PA6NNM8 815 aa16.03■□□□□ 0.16
NCKIPSD-207ENST00000453349 HOXA2O43364 376 aa16.03■□□□□ 0.16
NCKIPSD-207ENST00000453349 SMC2O95347 1197 aa16.03■□□□□ 0.16
NCKIPSD-207ENST00000453349 GJB5O95377 273 aa16.03■□□□□ 0.16
NCKIPSD-207ENST00000453349 NPTXRO95502 500 aa16.03■□□□□ 0.16
NCKIPSD-207ENST00000453349 PRR29P0C7W0 189 aa16.03■□□□□ 0.16
NCKIPSD-207ENST00000453349 MATR3P43243 847 aaKnown RBP eCLIP16.03■□□□□ 0.16
NCKIPSD-207ENST00000453349 LIG4P49917 911 aa16.03■□□□□ 0.16
NCKIPSD-207ENST00000453349 DPYDQ12882 1025 aa16.03■□□□□ 0.16
NCKIPSD-207ENST00000453349 RAB30Q15771 203 aa16.03■□□□□ 0.16
NCKIPSD-207ENST00000453349 KMT5BQ4FZB7 885 aa16.03■□□□□ 0.16
NCKIPSD-207ENST00000453349 FAM26FQ5R3K3 315 aa16.03■□□□□ 0.16
NCKIPSD-207ENST00000453349 UBXN11Q5T124 520 aa16.03■□□□□ 0.16
NCKIPSD-207ENST00000453349 ZPBP2Q6X784 338 aa16.03■□□□□ 0.16
NCKIPSD-207ENST00000453349 CDR2LQ86X02 465 aaPredicted RBP16.03■□□□□ 0.16
NCKIPSD-207ENST00000453349 RNF169Q8NCN4 708 aa16.03■□□□□ 0.16
NCKIPSD-207ENST00000453349 ACCSQ96QU6 501 aa16.03■□□□□ 0.16
NCKIPSD-207ENST00000453349 PDZD7Q9H5P4 517 aa16.03■□□□□ 0.16
NCKIPSD-207ENST00000453349 PCDHA11Q9Y5I1 949 aa16.03■□□□□ 0.16
NCKIPSD-207ENST00000453349 MICAL3Q7RTP6 2002 aa16.02■□□□□ 0.16
NCKIPSD-207ENST00000453349 KLRC4O43908 158 aa16.02■□□□□ 0.16
NCKIPSD-207ENST00000453349 DGKIO75912 1065 aa16.02■□□□□ 0.16
NCKIPSD-207ENST00000453349 MYBP10242 640 aa16.02■□□□□ 0.16
NCKIPSD-207ENST00000453349 ITGA4P13612 1032 aa16.02■□□□□ 0.16
NCKIPSD-207ENST00000453349 RABGGTBP53611 331 aa16.02■□□□□ 0.16
NCKIPSD-207ENST00000453349 PNOCQ13519 176 aa16.02■□□□□ 0.16
NCKIPSD-207ENST00000453349 DCAF4L1Q3SXM0 396 aa16.02■□□□□ 0.16
NCKIPSD-207ENST00000453349 HABP4Q5JVS0 413 aaKnown RBP16.02■□□□□ 0.16
NCKIPSD-207ENST00000453349 L1TD1Q5T7N2 865 aaKnown RBP16.02■□□□□ 0.16
NCKIPSD-207ENST00000453349 FAM109BQ6ICB4 259 aaPredicted RBP16.02■□□□□ 0.16
NCKIPSD-207ENST00000453349 MRPL10Q7Z7H8 261 aaKnown RBP16.02■□□□□ 0.16
NCKIPSD-207ENST00000453349 SYCP3Q8IZU3 236 aa16.02■□□□□ 0.16
NCKIPSD-207ENST00000453349 CRIPAKQ8N1N5 446 aa16.02■□□□□ 0.16
NCKIPSD-207ENST00000453349 HPS3Q969F9 1004 aa16.02■□□□□ 0.16
NCKIPSD-207ENST00000453349 YME1L1Q96TA2 773 aa16.02■□□□□ 0.16
NCKIPSD-207ENST00000453349 STRA6Q9BX79 667 aa16.02■□□□□ 0.16
NCKIPSD-207ENST00000453349 EIF2AQ9BY44 585 aaKnown RBP16.02■□□□□ 0.16
NCKIPSD-207ENST00000453349 TMEM206Q9H813 350 aa16.02■□□□□ 0.16
NCKIPSD-207ENST00000453349 SLC39A2Q9NP94 309 aa16.02■□□□□ 0.16
NCKIPSD-207ENST00000453349 UBN1Q9NPG3 1134 aa16.02■□□□□ 0.16
NCKIPSD-207ENST00000453349 RMND1Q9NWS8 449 aa16.02■□□□□ 0.16
NCKIPSD-207ENST00000453349 CLDN3O15551 220 aa16.01■□□□□ 0.15
NCKIPSD-207ENST00000453349 TOM1L1O75674 476 aa16.01■□□□□ 0.15
NCKIPSD-207ENST00000453349 PRPF6O94906 941 aaKnown RBP16.01■□□□□ 0.15
NCKIPSD-207ENST00000453349 EDN1P05305 212 aa16.01■□□□□ 0.15
NCKIPSD-207ENST00000453349 EHHADHQ08426 723 aa16.01■□□□□ 0.15
NCKIPSD-207ENST00000453349 KCNB1Q14721 858 aa16.01■□□□□ 0.15
NCKIPSD-207ENST00000453349 MPZL3Q6UWV2 235 aa16.01■□□□□ 0.15
NCKIPSD-207ENST00000453349 ZBTB33Q86T24 672 aa16.01■□□□□ 0.15
NCKIPSD-207ENST00000453349 MAP4K3Q8IVH8 894 aa16.01■□□□□ 0.15
NCKIPSD-207ENST00000453349 ABI1Q8IZP0 508 aa16.01■□□□□ 0.15
NCKIPSD-207ENST00000453349 SMARCE1Q969G3 411 aa16.01■□□□□ 0.15
NCKIPSD-207ENST00000453349 GSDMAQ96QA5 445 aa16.01■□□□□ 0.15
NCKIPSD-207ENST00000453349 IPPQ9Y573 584 aa16.01■□□□□ 0.15
NCKIPSD-207ENST00000453349 HNRNPDLO14979 420 aaKnown RBP16■□□□□ 0.15
NCKIPSD-207ENST00000453349 EIF3DO15371 548 aaKnown RBP eCLIP16■□□□□ 0.15
NCKIPSD-207ENST00000453349 PPP1R37O75864 691 aa16■□□□□ 0.15
NCKIPSD-207ENST00000453349 RHOBTB3O94955 611 aa16■□□□□ 0.15
NCKIPSD-207ENST00000453349 PIGRP01833 764 aa16■□□□□ 0.15
NCKIPSD-207ENST00000453349 MCF2P10911 925 aa16■□□□□ 0.15
NCKIPSD-207ENST00000453349 CASP5P51878 434 aa16■□□□□ 0.15
NCKIPSD-207ENST00000453349 HTRA4P83105 476 aaPredicted RBP16■□□□□ 0.15
NCKIPSD-207ENST00000453349 ZNF568Q3ZCX4 644 aa16■□□□□ 0.15
NCKIPSD-207ENST00000453349 EEF1DP3Q658K8 133 aa16■□□□□ 0.15
NCKIPSD-207ENST00000453349 SLFN12LQ6IEE8 588 aa16■□□□□ 0.15
NCKIPSD-207ENST00000453349 ZNF598Q86UK7 904 aaKnown RBP16■□□□□ 0.15
NCKIPSD-207ENST00000453349 SMG8Q8ND04 991 aaKnown RBP16■□□□□ 0.15
NCKIPSD-207ENST00000453349 ZNF507Q8TCN5 953 aa16■□□□□ 0.15
NCKIPSD-207ENST00000453349 ZNF689Q96CS4 500 aaPredicted RBP16■□□□□ 0.15
NCKIPSD-207ENST00000453349 ZBTB45Q96K62 511 aaPredicted RBP16■□□□□ 0.15
NCKIPSD-207ENST00000453349 PBX4Q9BYU1 374 aa16■□□□□ 0.15
NCKIPSD-207ENST00000453349 PTPRHQ9HD43 1115 aa16■□□□□ 0.15
NCKIPSD-207ENST00000453349 PARP2Q9UGN5 583 aa16■□□□□ 0.15
NCKIPSD-207ENST00000453349 PCDHA5Q9Y5H7 936 aa16■□□□□ 0.15
NCKIPSD-207ENST00000453349 TBKBP1A7MCY6 615 aa15.99■□□□□ 0.15
NCKIPSD-207ENST00000453349 KIF20AO95235 890 aa15.99■□□□□ 0.15
NCKIPSD-207ENST00000453349 FGFR1P11362 822 aa15.99■□□□□ 0.15
NCKIPSD-207ENST00000453349 MYOGP15173 224 aa15.99■□□□□ 0.15
NCKIPSD-207ENST00000453349 PROZP22891 400 aa15.99■□□□□ 0.15
NCKIPSD-207ENST00000453349 PBX2P40425 430 aa15.99■□□□□ 0.15
NCKIPSD-207ENST00000453349 BTG3Q14201 252 aaPredicted RBP15.99■□□□□ 0.15
NCKIPSD-207ENST00000453349 EPM2AIP1Q7L775 607 aaPredicted RBP15.99■□□□□ 0.15
NCKIPSD-207ENST00000453349 RSPH1Q8WYR4 309 aa15.99■□□□□ 0.15
NCKIPSD-207ENST00000453349 LPPQ93052 612 aa15.99■□□□□ 0.15
NCKIPSD-207ENST00000453349 APOL6Q9BWW8 343 aa15.99■□□□□ 0.15
NCKIPSD-207ENST00000453349 FGFBP2Q9BYJ0 223 aa15.99■□□□□ 0.15
NCKIPSD-207ENST00000453349 GTPBP4Q9BZE4 634 aaKnown RBP15.99■□□□□ 0.15
NCKIPSD-207ENST00000453349 TMEM117Q9H0C3 514 aa15.99■□□□□ 0.15
NCKIPSD-207ENST00000453349 RSAD1Q9HA92 442 aa15.99■□□□□ 0.15
NCKIPSD-207ENST00000453349 SLC28A3Q9HAS3 691 aa15.99■□□□□ 0.15
NCKIPSD-207ENST00000453349 ANKFY1Q9P2R3 1169 aa15.99■□□□□ 0.15
NCKIPSD-207ENST00000453349 HES2Q9Y543 173 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms