RNA–Protein interactions for RNA: ENST00000448526.6

CDKN1A-204, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDKN1A, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-204ENST00000448526 LMAN1P49257 510 aa18.49■□□□□ 0.55
CDKN1A-204ENST00000448526 R3HDM1Q15032 1099 aaKnown RBP18.49■□□□□ 0.55
CDKN1A-204ENST00000448526 EMBQ6PCB8 327 aa18.49■□□□□ 0.55
CDKN1A-204ENST00000448526 FMNL3Q8IVF7 1028 aa18.49■□□□□ 0.55
CDKN1A-204ENST00000448526 SYCE1Q8N0S2 351 aa18.49■□□□□ 0.55
CDKN1A-204ENST00000448526 KIFAP3Q92845 792 aa18.49■□□□□ 0.55
CDKN1A-204ENST00000448526 ATP6V0A1Q93050 837 aa18.49■□□□□ 0.55
CDKN1A-204ENST00000448526 CAVIN3Q969G5 261 aa18.49■□□□□ 0.55
CDKN1A-204ENST00000448526 ELMO3Q96BJ8 720 aa18.49■□□□□ 0.55
CDKN1A-204ENST00000448526 HVCN1Q96D96 273 aa18.49■□□□□ 0.55
CDKN1A-204ENST00000448526 ACP6Q9NPH0 428 aa18.49■□□□□ 0.55
CDKN1A-204ENST00000448526 TMOD4Q9NZQ9 345 aa18.49■□□□□ 0.55
CDKN1A-204ENST00000448526 USP20Q9Y2K6 914 aa18.49■□□□□ 0.55
CDKN1A-204ENST00000448526 MYH9P35579 1960 aaKnown RBP18.48■□□□□ 0.55
CDKN1A-204ENST00000448526 SPATA31C2B4DYI2 1134 aa18.48■□□□□ 0.55
CDKN1A-204ENST00000448526 PRKCEQ02156 737 aa18.48■□□□□ 0.55
CDKN1A-204ENST00000448526 KCTD19Q17RG1 926 aaPredicted RBP18.48■□□□□ 0.55
CDKN1A-204ENST00000448526 TAS1R3Q7RTX0 852 aa18.48■□□□□ 0.55
CDKN1A-204ENST00000448526 RPUSD2Q8IZ73 545 aaKnown RBP18.48■□□□□ 0.55
CDKN1A-204ENST00000448526 RASGEF1CQ8N431 466 aa18.48■□□□□ 0.55
CDKN1A-204ENST00000448526 PROCA1Q8NCQ7 364 aaPredicted RBP18.48■□□□□ 0.55
CDKN1A-204ENST00000448526 IFT81Q8WYA0 676 aa18.48■□□□□ 0.55
CDKN1A-204ENST00000448526 FAM204AQ9H8W3 233 aa18.48■□□□□ 0.55
CDKN1A-204ENST00000448526 SEPT9Q9UHD8 586 aaPredicted RBP18.48■□□□□ 0.55
CDKN1A-204ENST00000448526 ANKRD62A6NC57 917 aa18.47■□□□□ 0.55
CDKN1A-204ENST00000448526 GOLGA6BA6NDN3 693 aa18.47■□□□□ 0.55
CDKN1A-204ENST00000448526 DDX3YO15523 660 aaKnown RBP18.47■□□□□ 0.55
CDKN1A-204ENST00000448526 CHRNB2P17787 502 aa18.47■□□□□ 0.55
CDKN1A-204ENST00000448526 TNNC1P63316 161 aa18.47■□□□□ 0.55
CDKN1A-204ENST00000448526 NOL9Q5SY16 702 aaKnown RBP18.47■□□□□ 0.55
CDKN1A-204ENST00000448526 ZNF526Q8TF50 670 aaPredicted RBP18.47■□□□□ 0.55
CDKN1A-204ENST00000448526 PCDHB18PQ96TA0 734 aa18.47■□□□□ 0.55
CDKN1A-204ENST00000448526 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.47■□□□□ 0.557e-8■■■□□ 16.8
CDKN1A-204ENST00000448526 AMFRQ9UKV5 643 aa18.47■□□□□ 0.55
CDKN1A-204ENST00000448526 LOC285556D6RIA3 1793 aa18.47■□□□□ 0.55
CDKN1A-204ENST00000448526 PGRMC1O00264 195 aaKnown RBP18.47■□□□□ 0.55
CDKN1A-204ENST00000448526 ITGA4P13612 1032 aa18.47■□□□□ 0.55
CDKN1A-204ENST00000448526 USP8P40818 1118 aa18.47■□□□□ 0.55
CDKN1A-204ENST00000448526 NOP9Q86U38 636 aaKnown RBP18.47■□□□□ 0.55
CDKN1A-204ENST00000448526 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.47■□□□□ 0.552e-7■■■□□ 15.4
CDKN1A-204ENST00000448526 FAM84AQ96KN4 292 aa18.47■□□□□ 0.55
CDKN1A-204ENST00000448526 FBXL18Q96ME1 805 aa18.47■□□□□ 0.55
CDKN1A-204ENST00000448526 CYP26B1Q9NR63 512 aa18.47■□□□□ 0.55
CDKN1A-204ENST00000448526 USP2O75604 605 aaPredicted RBP18.46■□□□□ 0.55
CDKN1A-204ENST00000448526 FTLP02792 175 aaPredicted RBP18.46■□□□□ 0.55
CDKN1A-204ENST00000448526 ATP4AP20648 1035 aa18.46■□□□□ 0.55
CDKN1A-204ENST00000448526 CNTN2Q02246 1040 aa18.46■□□□□ 0.55
CDKN1A-204ENST00000448526 DCAF12L1Q5VU92 463 aa18.46■□□□□ 0.55
CDKN1A-204ENST00000448526 FAM71AQ8IYT1 594 aa18.46■□□□□ 0.55
CDKN1A-204ENST00000448526 PPM1KQ8N3J5 372 aa18.46■□□□□ 0.55
CDKN1A-204ENST00000448526 MFSD14AQ96MC6 490 aa18.46■□□□□ 0.55
CDKN1A-204ENST00000448526 ISCUQ9H1K1 167 aa18.46■□□□□ 0.55
CDKN1A-204ENST00000448526 HOXC10Q9NYD6 342 aa18.46■□□□□ 0.55
CDKN1A-204ENST00000448526 NOCTQ9UK39 431 aaKnown RBP18.46■□□□□ 0.55
CDKN1A-204ENST00000448526 COQ4Q9Y3A0 265 aa18.46■□□□□ 0.55
CDKN1A-204ENST00000448526 CYP26A1O43174 497 aa18.46■□□□□ 0.55
CDKN1A-204ENST00000448526 DGAT1O75907 488 aa18.46■□□□□ 0.55
CDKN1A-204ENST00000448526 ERVK-9P63128 1117 aa18.46■□□□□ 0.55
CDKN1A-204ENST00000448526 TAF3Q5VWG9 929 aa18.46■□□□□ 0.55
CDKN1A-204ENST00000448526 KRT39Q6A163 491 aa18.46■□□□□ 0.55
CDKN1A-204ENST00000448526 HELQQ8TDG4 1101 aa18.46■□□□□ 0.55
CDKN1A-204ENST00000448526 TAS1R2Q8TE23 839 aa18.46■□□□□ 0.55
CDKN1A-204ENST00000448526 EPS8L1Q8TE68 723 aa18.46■□□□□ 0.55
CDKN1A-204ENST00000448526 POMGNT1Q8WZA1 660 aa18.46■□□□□ 0.55
CDKN1A-204ENST00000448526 C17orf75Q9HAS0 396 aa18.46■□□□□ 0.55
CDKN1A-204ENST00000448526 ZNFX1Q9P2E3 1918 aaKnown RBP18.46■□□□□ 0.54
CDKN1A-204ENST00000448526 SUPT20HL2P0C7V6 817 aa18.45■□□□□ 0.54
CDKN1A-204ENST00000448526 CYP24A1Q07973 514 aa18.45■□□□□ 0.54
CDKN1A-204ENST00000448526 PAK2Q13177 524 aa18.45■□□□□ 0.54
CDKN1A-204ENST00000448526 SUPT20HL1Q3ZLR7 823 aa18.45■□□□□ 0.54
CDKN1A-204ENST00000448526 MTERF2Q49AM1 385 aa18.45■□□□□ 0.54
CDKN1A-204ENST00000448526 TREML2Q5T2D2 321 aa18.45■□□□□ 0.54
CDKN1A-204ENST00000448526 SLC47A2Q86VL8 602 aa18.45■□□□□ 0.54
CDKN1A-204ENST00000448526 CNKSR2Q8WXI2 1034 aa18.45■□□□□ 0.54
CDKN1A-204ENST00000448526 VTI1AQ96AJ9 217 aa18.45■□□□□ 0.54
CDKN1A-204ENST00000448526 CDHR1Q96JP9 859 aa18.45■□□□□ 0.54
CDKN1A-204ENST00000448526 CALR3Q96L12 384 aaKnown RBP18.45■□□□□ 0.54
CDKN1A-204ENST00000448526 DDX47Q9H0S4 455 aaKnown RBP18.45■□□□□ 0.54
CDKN1A-204ENST00000448526 POLR3FQ9H1D9 316 aaPredicted RBP18.45■□□□□ 0.54
CDKN1A-204ENST00000448526 TMEM8AQ9HCN3 771 aa18.45■□□□□ 0.54
CDKN1A-204ENST00000448526 CHORDC1Q9UHD1 332 aaPredicted RBP18.45■□□□□ 0.54
CDKN1A-204ENST00000448526 PTPRFP10586 1907 aa18.45■□□□□ 0.54
CDKN1A-204ENST00000448526 DKC1O60832 514 aaKnown RBP eCLIP18.44■□□□□ 0.548e-30■■■■■ 47.9
CDKN1A-204ENST00000448526 NNTQ13423 1086 aa18.44■□□□□ 0.54
CDKN1A-204ENST00000448526 SH3D19Q5HYK7 790 aa18.44■□□□□ 0.54
CDKN1A-204ENST00000448526 CYFIP1Q7L576 1253 aa18.44■□□□□ 0.54
CDKN1A-204ENST00000448526 MCPH1Q8NEM0 835 aa18.44■□□□□ 0.54
CDKN1A-204ENST00000448526 TMC2Q8TDI7 906 aa18.44■□□□□ 0.54
CDKN1A-204ENST00000448526 SHC3Q92529 594 aa18.44■□□□□ 0.54
CDKN1A-204ENST00000448526 ATP6V0A4Q9HBG4 840 aa18.44■□□□□ 0.54
CDKN1A-204ENST00000448526 ARHGAP28Q9P2N2 729 aa18.44■□□□□ 0.54
CDKN1A-204ENST00000448526 SNCAIPQ9Y6H5 919 aa18.44■□□□□ 0.54
CDKN1A-204ENST00000448526 BHMG1C9JSJ3 638 aaPredicted RBP18.44■□□□□ 0.54
CDKN1A-204ENST00000448526 KRIT1O00522 736 aa18.44■□□□□ 0.54
CDKN1A-204ENST00000448526 SART1O43290 800 aaKnown RBP18.44■□□□□ 0.54
CDKN1A-204ENST00000448526 STAM2O75886 525 aa18.44■□□□□ 0.54
CDKN1A-204ENST00000448526 GPC3P51654 580 aa18.44■□□□□ 0.54
CDKN1A-204ENST00000448526 RTP1P59025 263 aa18.44■□□□□ 0.54
CDKN1A-204ENST00000448526 PRPF4BQ13523 1007 aaKnown RBP18.44■□□□□ 0.54
CDKN1A-204ENST00000448526 GNPTABQ3T906 1256 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms