RNA–Protein interactions for RNA: ENST00000445676.5

UBE2F-216, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-216ENST00000445676 KANSL3Q9P2N6 904 aa16.58■□□□□ 0.24
UBE2F-216ENST00000445676 NAP1L2Q9ULW6 460 aaPredicted RBP16.58■□□□□ 0.24
UBE2F-216ENST00000445676 NUMBLQ9Y6R0 609 aa16.58■□□□□ 0.24
UBE2F-216ENST00000445676 NID2Q14112 1375 aa16.57■□□□□ 0.24
UBE2F-216ENST00000445676 HOXA11P31270 313 aaPredicted RBP16.57■□□□□ 0.24
UBE2F-216ENST00000445676 DSG1Q02413 1049 aa16.57■□□□□ 0.24
UBE2F-216ENST00000445676 RNF20Q5VTR2 975 aa16.57■□□□□ 0.24
UBE2F-216ENST00000445676 ELMSAN1Q6PJG2 1045 aa16.57■□□□□ 0.24
UBE2F-216ENST00000445676 ANO5Q75V66 913 aa16.57■□□□□ 0.24
UBE2F-216ENST00000445676 NT5C3AQ9H0P0 336 aa16.57■□□□□ 0.24
UBE2F-216ENST00000445676 DPP7Q9UHL4 492 aa16.57■□□□□ 0.24
UBE2F-216ENST00000445676 SSX2IPQ9Y2D8 614 aa16.57■□□□□ 0.24
UBE2F-216ENST00000445676 COL4A3BPQ9Y5P4 624 aa16.57■□□□□ 0.24
UBE2F-216ENST00000445676 F5P12259 2224 aa16.57■□□□□ 0.24
UBE2F-216ENST00000445676 VWA8A3KMH1 1905 aa16.57■□□□□ 0.24
UBE2F-216ENST00000445676 CACNA1GO43497 2377 aa16.56■□□□□ 0.24
UBE2F-216ENST00000445676 PRPF3O43395 683 aaKnown RBP16.56■□□□□ 0.24
UBE2F-216ENST00000445676 KINO60870 393 aaKnown RBP16.56■□□□□ 0.24
UBE2F-216ENST00000445676 NCLP19338 710 aaKnown RBP16.56■□□□□ 0.24
UBE2F-216ENST00000445676 OR1G1P47890 313 aa16.56■□□□□ 0.24
UBE2F-216ENST00000445676 USP11P51784 963 aa16.56■□□□□ 0.24
UBE2F-216ENST00000445676 STARD6P59095 220 aa16.56■□□□□ 0.24
UBE2F-216ENST00000445676 DSC1Q08554 894 aa16.56■□□□□ 0.24
UBE2F-216ENST00000445676 SMG8Q8ND04 991 aaKnown RBP16.56■□□□□ 0.24
UBE2F-216ENST00000445676 BICD2Q8TD16 824 aa16.56■□□□□ 0.24
UBE2F-216ENST00000445676 HDAC7Q8WUI4 952 aa16.56■□□□□ 0.24
UBE2F-216ENST00000445676 PHKBQ93100 1093 aa16.56■□□□□ 0.24
UBE2F-216ENST00000445676 RPP25Q9BUL9 199 aaKnown RBP16.56■□□□□ 0.24
UBE2F-216ENST00000445676 PLEKHA4Q9H4M7 779 aa16.56■□□□□ 0.24
UBE2F-216ENST00000445676 PIDD1Q9HB75 910 aa16.56■□□□□ 0.24
UBE2F-216ENST00000445676 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.56■□□□□ 0.24
UBE2F-216ENST00000445676 DDX11L8A8MPP1 907 aa16.55■□□□□ 0.24
UBE2F-216ENST00000445676 TGM5O43548 720 aa16.55■□□□□ 0.24
UBE2F-216ENST00000445676 PALB2Q86YC2 1186 aa16.55■□□□□ 0.24
UBE2F-216ENST00000445676 B3GALT6Q96L58 329 aa16.55■□□□□ 0.24
UBE2F-216ENST00000445676 PRKD2Q9BZL6 878 aa16.55■□□□□ 0.24
UBE2F-216ENST00000445676 CHST7Q9NS84 486 aa16.55■□□□□ 0.24
UBE2F-216ENST00000445676 ZDHHC7Q9NXF8 308 aa16.55■□□□□ 0.24
UBE2F-216ENST00000445676 VPS54Q9P1Q0 977 aa16.55■□□□□ 0.24
UBE2F-216ENST00000445676 USP24Q9UPU5 2620 aa16.55■□□□□ 0.24
UBE2F-216ENST00000445676 CNOT1A5YKK6 2376 aaKnown RBP16.54■□□□□ 0.24
UBE2F-216ENST00000445676 CCDC196A0A1B0GTZ2 297 aa16.54■□□□□ 0.24
UBE2F-216ENST00000445676 TDP2O95551 362 aa16.54■□□□□ 0.24
UBE2F-216ENST00000445676 MLH1P40692 756 aa16.54■□□□□ 0.24
UBE2F-216ENST00000445676 NPEPPSP55786 919 aa16.54■□□□□ 0.24
UBE2F-216ENST00000445676 GPC5P78333 572 aa16.54■□□□□ 0.24
UBE2F-216ENST00000445676 TSGA10IPQ3SY00 556 aa16.54■□□□□ 0.24
UBE2F-216ENST00000445676 Q4G0T1 1027 aa16.54■□□□□ 0.24
UBE2F-216ENST00000445676 LILRA6Q6PI73 481 aa16.54■□□□□ 0.24
UBE2F-216ENST00000445676 SRGAP1Q7Z6B7 1085 aa16.54■□□□□ 0.24
UBE2F-216ENST00000445676 GLYCTKQ8IVS8 523 aa16.54■□□□□ 0.24
UBE2F-216ENST00000445676 ZNF579Q8NAF0 562 aaKnown RBP16.54■□□□□ 0.24
UBE2F-216ENST00000445676 CCDC148Q8NFR7 591 aa16.54■□□□□ 0.24
UBE2F-216ENST00000445676 ETNPPLQ8TBG4 499 aa16.54■□□□□ 0.24
UBE2F-216ENST00000445676 TBCKQ8TEA7 893 aa16.54■□□□□ 0.24
UBE2F-216ENST00000445676 FGF14Q92915 247 aa16.54■□□□□ 0.24
UBE2F-216ENST00000445676 GAD1Q99259 594 aa16.54■□□□□ 0.24
UBE2F-216ENST00000445676 JPH2Q9BR39 696 aaPredicted RBP16.54■□□□□ 0.24
UBE2F-216ENST00000445676 EIF2AQ9BY44 585 aaKnown RBP16.54■□□□□ 0.24
UBE2F-216ENST00000445676 RNF39Q9H2S5 420 aa16.54■□□□□ 0.24
UBE2F-216ENST00000445676 MIOSQ9NXC5 875 aa16.54■□□□□ 0.24
UBE2F-216ENST00000445676 IPPQ9Y573 584 aa16.54■□□□□ 0.24
UBE2F-216ENST00000445676 CFAP47Q6ZTR5 3102 aa16.54■□□□□ 0.24
UBE2F-216ENST00000445676 RALGAPA1Q6GYQ0 2036 aa16.53■□□□□ 0.24
UBE2F-216ENST00000445676 ARL5CA6NH57 179 aa16.53■□□□□ 0.24
UBE2F-216ENST00000445676 SPTLC1O15269 473 aa16.53■□□□□ 0.24
UBE2F-216ENST00000445676 GAS2O43903 313 aaKnown RBP16.53■□□□□ 0.24
UBE2F-216ENST00000445676 ITGA4P13612 1032 aa16.53■□□□□ 0.24
UBE2F-216ENST00000445676 CPA1P15085 419 aa16.53■□□□□ 0.24
UBE2F-216ENST00000445676 RPL17P18621 184 aaKnown RBP16.53■□□□□ 0.24
UBE2F-216ENST00000445676 SCNN1GP51170 649 aa16.53■□□□□ 0.24
UBE2F-216ENST00000445676 PSMC5P62195 406 aa16.53■□□□□ 0.24
UBE2F-216ENST00000445676 NTRK3Q16288 839 aa16.53■□□□□ 0.24
UBE2F-216ENST00000445676 VARS2Q5ST30 1063 aaKnown RBP16.53■□□□□ 0.24
UBE2F-216ENST00000445676 PARM1Q6UWI2 310 aa16.53■□□□□ 0.24
UBE2F-216ENST00000445676 TMEM143Q96AN5 459 aa16.53■□□□□ 0.24
UBE2F-216ENST00000445676 ZFP42Q96MM3 310 aa16.53■□□□□ 0.24
UBE2F-216ENST00000445676 DDX23Q9BUQ8 820 aaKnown RBP16.53■□□□□ 0.24
UBE2F-216ENST00000445676 GPR62Q9BZJ7 368 aa16.53■□□□□ 0.24
UBE2F-216ENST00000445676 HES2Q9Y543 173 aa16.53■□□□□ 0.24
UBE2F-216ENST00000445676 ZFHX4Q86UP3 3567 aa16.53■□□□□ 0.24
UBE2F-216ENST00000445676 CYP3A7-CYP3A51PA0A087WV96 503 aa16.52■□□□□ 0.24
UBE2F-216ENST00000445676 KANSL1LA0AUZ9 987 aa16.52■□□□□ 0.24
UBE2F-216ENST00000445676 EML1O00423 815 aa16.52■□□□□ 0.24
UBE2F-216ENST00000445676 C1RP00736 705 aa16.52■□□□□ 0.24
UBE2F-216ENST00000445676 SRGAP2CP0DJJ0 459 aa16.52■□□□□ 0.24
UBE2F-216ENST00000445676 CYP3A7P24462 503 aa16.52■□□□□ 0.24
UBE2F-216ENST00000445676 LAMTOR4Q0VGL1 99 aa16.52■□□□□ 0.24
UBE2F-216ENST00000445676 SNW1Q13573 536 aaKnown RBP16.52■□□□□ 0.24
UBE2F-216ENST00000445676 ZNF528Q3MIS6 628 aa16.52■□□□□ 0.24
UBE2F-216ENST00000445676 FUT10Q6P4F1 479 aa16.52■□□□□ 0.24
UBE2F-216ENST00000445676 CNNM3Q8NE01 707 aa16.52■□□□□ 0.24
UBE2F-216ENST00000445676 PRPF31Q8WWY3 499 aaKnown RBP16.52■□□□□ 0.24
UBE2F-216ENST00000445676 PSPC1Q8WXF1 523 aaKnown RBP16.52■□□□□ 0.24
UBE2F-216ENST00000445676 SHDQ96IW2 340 aa16.52■□□□□ 0.24
UBE2F-216ENST00000445676 MBOAT7Q96N66 472 aa16.52■□□□□ 0.24
UBE2F-216ENST00000445676 DHX33Q9H6R0 707 aaKnown RBP16.52■□□□□ 0.24
UBE2F-216ENST00000445676 UBN1Q9NPG3 1134 aa16.52■□□□□ 0.24
UBE2F-216ENST00000445676 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.52■□□□□ 0.24
UBE2F-216ENST00000445676 BMP2KQ9NSY1 1161 aaPredicted RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms