RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 PCDHA12Q9UN75 941 aa15.37■□□□□ 0.05
PTPRE-203ENST00000442830 GIT1Q9Y2X7 761 aa15.37■□□□□ 0.05
PTPRE-203ENST00000442830 NRP1O14786 923 aa15.36■□□□□ 0.05
PTPRE-203ENST00000442830 XRCC6P12956 609 aaKnown RBP eCLIP15.36■□□□□ 0.05
PTPRE-203ENST00000442830 CLCN5P51795 746 aa15.36■□□□□ 0.05
PTPRE-203ENST00000442830 VCPP55072 806 aaKnown RBP15.36■□□□□ 0.05
PTPRE-203ENST00000442830 SPIRE1Q08AE8 756 aa15.36■□□□□ 0.05
PTPRE-203ENST00000442830 TRIM29Q14134 588 aa15.36■□□□□ 0.05
PTPRE-203ENST00000442830 LONRF3Q496Y0 759 aa15.36■□□□□ 0.05
PTPRE-203ENST00000442830 ZNF280BQ86YH2 543 aa15.36■□□□□ 0.05
PTPRE-203ENST00000442830 AUTS2Q8WXX7 1259 aa15.36■□□□□ 0.05
PTPRE-203ENST00000442830 DYDC2Q96IM9 177 aa15.36■□□□□ 0.05
PTPRE-203ENST00000442830 CSRNP2Q9H175 543 aa15.36■□□□□ 0.05
PTPRE-203ENST00000442830 MFSD1Q9H3U5 465 aa15.36■□□□□ 0.05
PTPRE-203ENST00000442830 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.36■□□□□ 0.05
PTPRE-203ENST00000442830 IGSF9Q9P2J2 1179 aa15.36■□□□□ 0.05
PTPRE-203ENST00000442830 MEIS3P2A8K0S8 358 aa15.35■□□□□ 0.05
PTPRE-203ENST00000442830 BRD1O95696 1058 aa15.35■□□□□ 0.05
PTPRE-203ENST00000442830 GLUD1P00367 558 aa15.35■□□□□ 0.05
PTPRE-203ENST00000442830 CNPP09543 421 aaKnown RBP15.35■□□□□ 0.05
PTPRE-203ENST00000442830 GLUD2P49448 558 aa15.35■□□□□ 0.05
PTPRE-203ENST00000442830 CALCRLQ16602 461 aa15.35■□□□□ 0.05
PTPRE-203ENST00000442830 UBXN11Q5T124 520 aa15.35■□□□□ 0.05
PTPRE-203ENST00000442830 ASTLQ6HA08 431 aaPredicted RBP15.35■□□□□ 0.05
PTPRE-203ENST00000442830 TMC5Q6UXY8 1006 aa15.35■□□□□ 0.05
PTPRE-203ENST00000442830 TPH2Q8IWU9 490 aa15.35■□□□□ 0.05
PTPRE-203ENST00000442830 BCL7CQ8WUZ0 217 aaPredicted RBP15.35■□□□□ 0.05
PTPRE-203ENST00000442830 ATOH1Q92858 354 aaPredicted RBP15.35■□□□□ 0.05
PTPRE-203ENST00000442830 NXPE3Q969Y0 559 aa15.35■□□□□ 0.05
PTPRE-203ENST00000442830 RPS6KC1Q96S38 1066 aa15.35■□□□□ 0.05
PTPRE-203ENST00000442830 EIF2AK1Q9BQI3 630 aaKnown RBP15.35■□□□□ 0.05
PTPRE-203ENST00000442830 LARP6Q9BRS8 491 aaKnown RBP15.35■□□□□ 0.05
PTPRE-203ENST00000442830 COLEC11Q9BWP8 271 aa15.35■□□□□ 0.05
PTPRE-203ENST00000442830 MINDY3Q9H8M7 445 aa15.35■□□□□ 0.05
PTPRE-203ENST00000442830 RGL1Q9NZL6 768 aa15.35■□□□□ 0.05
PTPRE-203ENST00000442830 WRAP73Q9P2S5 460 aaPredicted RBP15.35■□□□□ 0.05
PTPRE-203ENST00000442830 IPPQ9Y573 584 aa15.35■□□□□ 0.05
PTPRE-203ENST00000442830 ARL5CA6NH57 179 aa15.34■□□□□ 0.05
PTPRE-203ENST00000442830 INO80B-WBP1J3KQ70 363 aa15.34■□□□□ 0.05
PTPRE-203ENST00000442830 NEMFO60524 1076 aa15.34■□□□□ 0.05
PTPRE-203ENST00000442830 TSPAN1O60635 241 aa15.34■□□□□ 0.05
PTPRE-203ENST00000442830 LILRB3O75022 631 aa15.34■□□□□ 0.05
PTPRE-203ENST00000442830 DDHD2O94830 711 aa15.34■□□□□ 0.05
PTPRE-203ENST00000442830 SLITRK3O94933 977 aa15.34■□□□□ 0.05
PTPRE-203ENST00000442830 POMCP01189 267 aa15.34■□□□□ 0.05
PTPRE-203ENST00000442830 CYP4A11Q02928 519 aa15.34■□□□□ 0.05
PTPRE-203ENST00000442830 DSC1Q08554 894 aa15.34■□□□□ 0.05
PTPRE-203ENST00000442830 CTTNQ14247 550 aaKnown RBP15.34■□□□□ 0.05
PTPRE-203ENST00000442830 COLGALT2Q8IYK4 626 aa15.34■□□□□ 0.05
PTPRE-203ENST00000442830 C12orf76Q8N812 135 aaPredicted RBP15.34■□□□□ 0.05
PTPRE-203ENST00000442830 PRIMPOLQ96LW4 560 aa15.34■□□□□ 0.05
PTPRE-203ENST00000442830 VN1R3Q9BXE9 311 aa15.34■□□□□ 0.05
PTPRE-203ENST00000442830 PLEKHA4Q9H4M7 779 aa15.34■□□□□ 0.05
PTPRE-203ENST00000442830 LIMD1Q9UGP4 676 aa15.34■□□□□ 0.05
PTPRE-203ENST00000442830 TPCN1Q9ULQ1 816 aa15.34■□□□□ 0.05
PTPRE-203ENST00000442830 PROB1E7EW31 1015 aa15.33■□□□□ 0.04
PTPRE-203ENST00000442830 GFRA3O60609 400 aa15.33■□□□□ 0.04
PTPRE-203ENST00000442830 NEFLP07196 543 aa15.33■□□□□ 0.04
PTPRE-203ENST00000442830 OR1G1P47890 313 aa15.33■□□□□ 0.04
PTPRE-203ENST00000442830 AK2P54819 239 aa15.33■□□□□ 0.04
PTPRE-203ENST00000442830 GRIK3Q13003 919 aa15.33■□□□□ 0.04
PTPRE-203ENST00000442830 TDGQ13569 410 aa15.33■□□□□ 0.04
PTPRE-203ENST00000442830 SLC27A1Q6PCB7 646 aa15.33■□□□□ 0.04
PTPRE-203ENST00000442830 ZNF579Q8NAF0 562 aaKnown RBP15.33■□□□□ 0.04
PTPRE-203ENST00000442830 SMG8Q8ND04 991 aaKnown RBP15.33■□□□□ 0.04
PTPRE-203ENST00000442830 MCPH1Q8NEM0 835 aa15.33■□□□□ 0.04
PTPRE-203ENST00000442830 OXER1Q8TDS5 423 aa15.33■□□□□ 0.04
PTPRE-203ENST00000442830 HSD17B14Q9BPX1 270 aa15.33■□□□□ 0.04
PTPRE-203ENST00000442830 TTC12Q9H892 705 aaPredicted RBP15.33■□□□□ 0.04
PTPRE-203ENST00000442830 RXFP1Q9HBX9 757 aa15.33■□□□□ 0.04
PTPRE-203ENST00000442830 MAN1C1Q9NR34 630 aa15.33■□□□□ 0.04
PTPRE-203ENST00000442830 DUSP12Q9UNI6 340 aa15.33■□□□□ 0.04
PTPRE-203ENST00000442830 PLXNA3P51805 1871 aa15.33■□□□□ 0.04
PTPRE-203ENST00000442830 PAPLNO95428 1278 aa15.32■□□□□ 0.04
PTPRE-203ENST00000442830 SSBP05455 408 aaKnown RBP eCLIP15.32■□□□□ 0.04
PTPRE-203ENST00000442830 WEE2P0C1S8 567 aa15.32■□□□□ 0.04
PTPRE-203ENST00000442830 ARL2P36404 184 aa15.32■□□□□ 0.04
PTPRE-203ENST00000442830 MLH1P40692 756 aa15.32■□□□□ 0.04
PTPRE-203ENST00000442830 RARRES1P49788 294 aa15.32■□□□□ 0.04
PTPRE-203ENST00000442830 DSG1Q02413 1049 aa15.32■□□□□ 0.04
PTPRE-203ENST00000442830 MBTD1Q05BQ5 628 aa15.32■□□□□ 0.04
PTPRE-203ENST00000442830 ORC2Q13416 577 aaPredicted RBP15.32■□□□□ 0.04
PTPRE-203ENST00000442830 RNF168Q8IYW5 571 aaPredicted RBP15.32■□□□□ 0.04
PTPRE-203ENST00000442830 TNFRSF25Q93038 417 aa15.32■□□□□ 0.04
PTPRE-203ENST00000442830 GTF3C6Q969F1 213 aa15.32■□□□□ 0.04
PTPRE-203ENST00000442830 GAD1Q99259 594 aa15.32■□□□□ 0.04
PTPRE-203ENST00000442830 RTP3Q9BQQ7 232 aa15.32■□□□□ 0.04
PTPRE-203ENST00000442830 C2orf40Q9H1Z8 148 aa15.32■□□□□ 0.04
PTPRE-203ENST00000442830 XPNPEP1Q9NQW7 623 aa15.32■□□□□ 0.04
PTPRE-203ENST00000442830 ZDHHC7Q9NXF8 308 aa15.32■□□□□ 0.04
PTPRE-203ENST00000442830 FNIP2Q9P278 1114 aa15.32■□□□□ 0.04
PTPRE-203ENST00000442830 CDH22Q9UJ99 828 aa15.32■□□□□ 0.04
PTPRE-203ENST00000442830 PRG3Q9Y2Y8 225 aaPredicted RBP15.32■□□□□ 0.04
PTPRE-203ENST00000442830 USP34Q70CQ2 3546 aa15.32■□□□□ 0.04
PTPRE-203ENST00000442830 DOCK8Q8NF50 2099 aa15.31■□□□□ 0.04
PTPRE-203ENST00000442830 B4GALT3O60512 393 aa15.31■□□□□ 0.04
PTPRE-203ENST00000442830 ASGR2P07307 311 aa15.31■□□□□ 0.04
PTPRE-203ENST00000442830 CAPSQ13938 189 aa15.31■□□□□ 0.04
PTPRE-203ENST00000442830 SAFBQ15424 915 aaKnown RBP eCLIP15.31■□□□□ 0.04
PTPRE-203ENST00000442830 USP41Q3LFD5 358 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms