RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 ARHGEF15O94989 841 aa13.55□□□□□ -0.24
USP1-203ENST00000442679 ZNF202O95125 648 aa13.55□□□□□ -0.24
USP1-203ENST00000442679 NPTXRO95502 500 aa13.55□□□□□ -0.24
USP1-203ENST00000442679 ATF7P17544 494 aaPredicted RBP13.55□□□□□ -0.24
USP1-203ENST00000442679 NMT1P30419 496 aaKnown RBP13.55□□□□□ -0.24
USP1-203ENST00000442679 ASIC1P78348 528 aa13.55□□□□□ -0.24
USP1-203ENST00000442679 TAP1Q03518 808 aa13.55□□□□□ -0.24
USP1-203ENST00000442679 PAN2Q504Q3 1202 aaKnown RBP13.55□□□□□ -0.24
USP1-203ENST00000442679 ATF7IP2Q5U623 682 aa13.55□□□□□ -0.24
USP1-203ENST00000442679 CNNM4Q6P4Q7 775 aa13.55□□□□□ -0.24
USP1-203ENST00000442679 Q7L0L9 218 aa13.55□□□□□ -0.24
USP1-203ENST00000442679 GRAMD1CQ8IYS0 662 aa13.55□□□□□ -0.24
USP1-203ENST00000442679 SMG8Q8ND04 991 aaKnown RBP13.55□□□□□ -0.24
USP1-203ENST00000442679 CNNM3Q8NE01 707 aa13.55□□□□□ -0.24
USP1-203ENST00000442679 LPPQ93052 612 aa13.55□□□□□ -0.24
USP1-203ENST00000442679 FIZ1Q96SL8 496 aa13.55□□□□□ -0.24
USP1-203ENST00000442679 ACO2Q99798 780 aaKnown RBP13.55□□□□□ -0.24
USP1-203ENST00000442679 BLZF1Q9H2G9 400 aa13.55□□□□□ -0.24
USP1-203ENST00000442679 TTYH1Q9H313 450 aaPredicted RBP13.55□□□□□ -0.24
USP1-203ENST00000442679 ZNF576Q9H609 170 aa13.55□□□□□ -0.24
USP1-203ENST00000442679 MRPL44Q9H9J2 332 aaKnown RBP13.55□□□□□ -0.24
USP1-203ENST00000442679 RC3H2Q9HBD1 1191 aaKnown RBP13.55□□□□□ -0.24
USP1-203ENST00000442679 TBC1D7Q9P0N9 293 aa13.55□□□□□ -0.24
USP1-203ENST00000442679 TBX20Q9UMR3 447 aa13.55□□□□□ -0.24
USP1-203ENST00000442679 SZT2Q5T011 3432 aa13.54□□□□□ -0.24
USP1-203ENST00000442679 GADD45BO75293 160 aaPredicted RBP13.54□□□□□ -0.24
USP1-203ENST00000442679 ITGA4P13612 1032 aa13.54□□□□□ -0.24
USP1-203ENST00000442679 CASP1P29466 404 aa13.54□□□□□ -0.24
USP1-203ENST00000442679 ABCD1P33897 745 aa13.54□□□□□ -0.24
USP1-203ENST00000442679 CUL4BQ13620 913 aa13.54□□□□□ -0.24
USP1-203ENST00000442679 ZC2HC1CQ53FD0 456 aaPredicted RBP13.54□□□□□ -0.24
USP1-203ENST00000442679 CLLU1OSQ5K130 101 aa13.54□□□□□ -0.24
USP1-203ENST00000442679 EEF1DP3Q658K8 133 aa13.54□□□□□ -0.24
USP1-203ENST00000442679 ZNF720Q7Z2F6 126 aa13.54□□□□□ -0.24
USP1-203ENST00000442679 CMTR2Q8IYT2 770 aaKnown RBP13.54□□□□□ -0.24
USP1-203ENST00000442679 ABI1Q8IZP0 508 aa13.54□□□□□ -0.24
USP1-203ENST00000442679 DEFB123Q8N688 67 aa13.54□□□□□ -0.24
USP1-203ENST00000442679 HELQQ8TDG4 1101 aa13.54□□□□□ -0.24
USP1-203ENST00000442679 FAM161BQ96MY7 647 aa13.54□□□□□ -0.24
USP1-203ENST00000442679 CASD1Q96PB1 797 aa13.54□□□□□ -0.24
USP1-203ENST00000442679 ADPGKQ9BRR6 497 aa13.54□□□□□ -0.24
USP1-203ENST00000442679 TARS2Q9BW92 718 aaKnown RBP13.54□□□□□ -0.24
USP1-203ENST00000442679 TMEM117Q9H0C3 514 aa13.54□□□□□ -0.24
USP1-203ENST00000442679 ST6GALNAC4Q9H4F1 302 aa13.54□□□□□ -0.24
USP1-203ENST00000442679 CERS4Q9HA82 394 aa13.54□□□□□ -0.24
USP1-203ENST00000442679 RNF19AQ9NV58 838 aa13.54□□□□□ -0.24
USP1-203ENST00000442679 TNFSF13BQ9Y275 285 aa13.54□□□□□ -0.24
USP1-203ENST00000442679 IPPQ9Y573 584 aa13.54□□□□□ -0.24
USP1-203ENST00000442679 CHD9Q3L8U1 2897 aa13.54□□□□□ -0.24
USP1-203ENST00000442679 PTPRSQ13332 1948 aa13.53□□□□□ -0.24
USP1-203ENST00000442679 MEIS3P2A8K0S8 358 aa13.53□□□□□ -0.24
USP1-203ENST00000442679 GTF2BQ00403 316 aa13.53□□□□□ -0.24
USP1-203ENST00000442679 COASYQ13057 564 aa13.53□□□□□ -0.24
USP1-203ENST00000442679 GLB1LQ6UWU2 654 aa13.53□□□□□ -0.24
USP1-203ENST00000442679 AGMOQ6ZNB7 445 aa13.53□□□□□ -0.24
USP1-203ENST00000442679 KRBA2Q6ZNG9 492 aa13.53□□□□□ -0.24
USP1-203ENST00000442679 APBB1IPQ7Z5R6 666 aaPredicted RBP13.53□□□□□ -0.24
USP1-203ENST00000442679 HACE1Q8IYU2 909 aa13.53□□□□□ -0.24
USP1-203ENST00000442679 FMR1NBQ8N0W7 255 aaPredicted RBP13.53□□□□□ -0.24
USP1-203ENST00000442679 TMEM87AQ8NBN3 555 aa13.53□□□□□ -0.24
USP1-203ENST00000442679 KCNN1Q92952 543 aa13.53□□□□□ -0.24
USP1-203ENST00000442679 BICD1Q96G01 975 aa13.53□□□□□ -0.24
USP1-203ENST00000442679 TGS1Q96RS0 853 aaKnown RBP13.53□□□□□ -0.24
USP1-203ENST00000442679 TCHPQ9BT92 498 aa13.53□□□□□ -0.24
USP1-203ENST00000442679 APOL6Q9BWW8 343 aa13.53□□□□□ -0.24
USP1-203ENST00000442679 PTPRHQ9HD43 1115 aa13.53□□□□□ -0.24
USP1-203ENST00000442679 UBN1Q9NPG3 1134 aa13.53□□□□□ -0.24
USP1-203ENST00000442679 OLFML3Q9NRN5 406 aa13.53□□□□□ -0.24
USP1-203ENST00000442679 HES2Q9Y543 173 aa13.53□□□□□ -0.24
USP1-203ENST00000442679 PCDHB13Q9Y5F0 798 aa13.53□□□□□ -0.24
USP1-203ENST00000442679 TTC3P53804 2025 aa13.52□□□□□ -0.24
USP1-203ENST00000442679 PVALEFA0A1B0GWK0 134 aa13.52□□□□□ -0.25
USP1-203ENST00000442679 GTPBP6O43824 516 aaPredicted RBP13.52□□□□□ -0.25
USP1-203ENST00000442679 PRPF40AO75400 957 aaKnown RBP13.52□□□□□ -0.25
USP1-203ENST00000442679 OFD1O75665 1012 aa13.52□□□□□ -0.25
USP1-203ENST00000442679 GCNT3O95395 438 aa13.52□□□□□ -0.25
USP1-203ENST00000442679 ERVK-21P61565 698 aa13.52□□□□□ -0.25
USP1-203ENST00000442679 FAM160A1Q05DH4 1040 aa13.52□□□□□ -0.25
USP1-203ENST00000442679 SNW1Q13573 536 aaKnown RBP13.52□□□□□ -0.25
USP1-203ENST00000442679 GRIN2CQ14957 1233 aa13.52□□□□□ -0.25
USP1-203ENST00000442679 DCAF4L1Q3SXM0 396 aa13.52□□□□□ -0.25
USP1-203ENST00000442679 KANK3Q6NY19 840 aa13.52□□□□□ -0.25
USP1-203ENST00000442679 ZPBP2Q6X784 338 aa13.52□□□□□ -0.25
USP1-203ENST00000442679 UNC13DQ70J99 1090 aa13.52□□□□□ -0.25
USP1-203ENST00000442679 SPRED2Q7Z698 418 aa13.52□□□□□ -0.25
USP1-203ENST00000442679 ZBTB33Q86T24 672 aa13.52□□□□□ -0.25
USP1-203ENST00000442679 ENGASEQ8NFI3 743 aa13.52□□□□□ -0.25
USP1-203ENST00000442679 ARNTL2Q8WYA1 636 aa13.52□□□□□ -0.25
USP1-203ENST00000442679 HPS3Q969F9 1004 aa13.52□□□□□ -0.25
USP1-203ENST00000442679 CCDC34Q96HJ3 373 aa13.52□□□□□ -0.25
USP1-203ENST00000442679 ZBTB45Q96K62 511 aaPredicted RBP13.52□□□□□ -0.25
USP1-203ENST00000442679 C17orf80Q9BSJ5 609 aa13.52□□□□□ -0.25
USP1-203ENST00000442679 STRA6Q9BX79 667 aa13.52□□□□□ -0.25
USP1-203ENST00000442679 NXF3Q9H4D5 531 aaKnown RBP13.52□□□□□ -0.25
USP1-203ENST00000442679 RSAD1Q9HA92 442 aa13.52□□□□□ -0.25
USP1-203ENST00000442679 TYW1Q9NV66 732 aaKnown RBP13.52□□□□□ -0.25
USP1-203ENST00000442679 PARP2Q9UGN5 583 aa13.52□□□□□ -0.25
USP1-203ENST00000442679 MTUS1Q9ULD2 1270 aa13.52□□□□□ -0.25
USP1-203ENST00000442679 INPP5FQ9Y2H2 1132 aa13.52□□□□□ -0.25
USP1-203ENST00000442679 MRPL42Q9Y6G3 142 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms