RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 ECM1Q16610 540 aa16.9■□□□□ 0.3
DHFR-201ENST00000439211 IWS1Q96ST2 819 aa16.9■□□□□ 0.3
DHFR-201ENST00000439211 NUP98P52948 1817 aa16.9■□□□□ 0.3
DHFR-201ENST00000439211 ABLIM1O14639 778 aa16.9■□□□□ 0.3
DHFR-201ENST00000439211 NAB2Q15742 525 aa16.9■□□□□ 0.3
DHFR-201ENST00000439211 CERKLQ49MI3 558 aaPredicted RBP16.9■□□□□ 0.3
DHFR-201ENST00000439211 GRAMD4Q6IC98 578 aa16.9■□□□□ 0.3
DHFR-201ENST00000439211 MTRF1LQ9UGC7 380 aaKnown RBP16.9■□□□□ 0.3
DHFR-201ENST00000439211 MAGEA13PA6NCF6 341 aa16.9■□□□□ 0.3
DHFR-201ENST00000439211 TXNDC9O14530 226 aa16.9■□□□□ 0.3
DHFR-201ENST00000439211 BAG2O95816 211 aa16.9■□□□□ 0.3
DHFR-201ENST00000439211 GJB7Q6PEY0 223 aa16.9■□□□□ 0.3
DHFR-201ENST00000439211 OLFML1Q6UWY5 402 aa16.9■□□□□ 0.3
DHFR-201ENST00000439211 SLFN12Q8IYM2 578 aa16.9■□□□□ 0.3
DHFR-201ENST00000439211 FRMD4BQ9Y2L6 1034 aa16.9■□□□□ 0.3
DHFR-201ENST00000439211 LRCH1Q9Y2L9 728 aa16.9■□□□□ 0.3
DHFR-201ENST00000439211 AFF2P51816 1311 aa16.89■□□□□ 0.29
DHFR-201ENST00000439211 CBX3Q13185 183 aa16.89■□□□□ 0.29
DHFR-201ENST00000439211 TBC1D10BQ4KMP7 808 aaPredicted RBP16.89■□□□□ 0.29
DHFR-201ENST00000439211 TEKT1Q969V4 418 aa16.89■□□□□ 0.29
DHFR-201ENST00000439211 EDEM3Q9BZQ6 932 aa16.89■□□□□ 0.29
DHFR-201ENST00000439211 RIOX1Q9H6W3 641 aa16.89■□□□□ 0.29
DHFR-201ENST00000439211 ESYT2A0FGR8 921 aa16.89■□□□□ 0.29
DHFR-201ENST00000439211 EXOC3O60645 756 aa16.89■□□□□ 0.29
DHFR-201ENST00000439211 UCHL3P15374 230 aa16.89■□□□□ 0.29
DHFR-201ENST00000439211 NT5C2P49902 561 aa16.89■□□□□ 0.29
DHFR-201ENST00000439211 PHLDB3Q6NSJ2 640 aa16.89■□□□□ 0.29
DHFR-201ENST00000439211 RBBP8NLQ8NC74 664 aaPredicted RBP16.89■□□□□ 0.29
DHFR-201ENST00000439211 DHX36Q9H2U1 1008 aaKnown RBP16.89■□□□□ 0.29
DHFR-201ENST00000439211 PDP2Q9P2J9 529 aa16.89■□□□□ 0.29
DHFR-201ENST00000439211 NKX1-2Q9UD57 310 aaPredicted RBP16.89■□□□□ 0.29
DHFR-201ENST00000439211 RABGAP1Q9Y3P9 1069 aa16.89■□□□□ 0.29
DHFR-201ENST00000439211 TARSP26639 723 aaKnown RBP16.89■□□□□ 0.29
DHFR-201ENST00000439211 VHLP40337 213 aa16.89■□□□□ 0.29
DHFR-201ENST00000439211 ARHGAP4P98171 946 aa16.89■□□□□ 0.29
DHFR-201ENST00000439211 ZBTB16Q05516 673 aa16.89■□□□□ 0.29
DHFR-201ENST00000439211 CTTNQ14247 550 aaKnown RBP16.89■□□□□ 0.29
DHFR-201ENST00000439211 SCYL3Q8IZE3 742 aa16.89■□□□□ 0.29
DHFR-201ENST00000439211 DAAM1Q9Y4D1 1078 aa16.89■□□□□ 0.29
DHFR-201ENST00000439211 GLI3P10071 1580 aa16.89■□□□□ 0.29
DHFR-201ENST00000439211 VIL1P09327 827 aaKnown RBP16.88■□□□□ 0.29
DHFR-201ENST00000439211 ZFXP17010 805 aaPredicted RBP16.88■□□□□ 0.29
DHFR-201ENST00000439211 KNOP1Q1ED39 458 aaKnown RBP16.88■□□□□ 0.29
DHFR-201ENST00000439211 SLC30A10Q6XR72 485 aa16.88■□□□□ 0.29
DHFR-201ENST00000439211 FBXO11Q86XK2 927 aa16.88■□□□□ 0.29
DHFR-201ENST00000439211 SMC1BQ8NDV3 1235 aa16.88■□□□□ 0.29
DHFR-201ENST00000439211 SCFD1Q8WVM8 642 aa16.88■□□□□ 0.29
DHFR-201ENST00000439211 TMEM237Q96Q45 408 aa16.88■□□□□ 0.29
DHFR-201ENST00000439211 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.88■□□□□ 0.292e-6■■■□□ 15
DHFR-201ENST00000439211 TMCO1Q9UM00 188 aa16.88■□□□□ 0.29
DHFR-201ENST00000439211 MYH3P11055 1940 aa16.88■□□□□ 0.29
DHFR-201ENST00000439211 LRP6O75581 1613 aa16.88■□□□□ 0.29
DHFR-201ENST00000439211 RASGRF2O14827 1237 aa16.88■□□□□ 0.29
DHFR-201ENST00000439211 SNX3O60493 162 aa16.88■□□□□ 0.29
DHFR-201ENST00000439211 ORC2Q13416 577 aaPredicted RBP16.88■□□□□ 0.29
DHFR-201ENST00000439211 PRR5LQ6MZQ0 368 aa16.88■□□□□ 0.29
DHFR-201ENST00000439211 ZNF653Q96CK0 615 aa16.88■□□□□ 0.29
DHFR-201ENST00000439211 NMD3Q96D46 503 aaKnown RBP16.88■□□□□ 0.29
DHFR-201ENST00000439211 ERP27Q96DN0 273 aa16.88■□□□□ 0.29
DHFR-201ENST00000439211 MIS12Q9H081 205 aa16.88■□□□□ 0.29
DHFR-201ENST00000439211 HAO1Q9UJM8 370 aa16.88■□□□□ 0.29
DHFR-201ENST00000439211 FGGP02679 453 aa16.88■□□□□ 0.29
DHFR-201ENST00000439211 MYBP10242 640 aa16.88■□□□□ 0.29
DHFR-201ENST00000439211 CYP11B2P19099 503 aa16.88■□□□□ 0.29
DHFR-201ENST00000439211 TMEM62Q0P6H9 643 aa16.88■□□□□ 0.29
DHFR-201ENST00000439211 ZNF662Q6ZS27 426 aa16.88■□□□□ 0.29
DHFR-201ENST00000439211 ST13P4Q8IZP2 240 aaPredicted RBP16.88■□□□□ 0.29
DHFR-201ENST00000439211 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.88■□□□□ 0.291e-9■■□□□ 13.5
DHFR-201ENST00000439211 MYH13Q9UKX3 1938 aa16.87■□□□□ 0.29
DHFR-201ENST00000439211 NR3C1P04150 777 aa16.87■□□□□ 0.29
DHFR-201ENST00000439211 TAL1P17542 331 aaPredicted RBP16.87■□□□□ 0.29
DHFR-201ENST00000439211 CETN1Q12798 172 aa16.87■□□□□ 0.29
DHFR-201ENST00000439211 SEPT7Q16181 437 aaKnown RBP16.87■□□□□ 0.29
DHFR-201ENST00000439211 FAM186BQ8IYM0 893 aa16.87■□□□□ 0.29
DHFR-201ENST00000439211 C1orf131Q8NDD1 294 aaKnown RBP16.87■□□□□ 0.29
DHFR-201ENST00000439211 AMNQ9BXJ7 453 aa16.87■□□□□ 0.29
DHFR-201ENST00000439211 GLT8D2Q9H1C3 349 aa16.87■□□□□ 0.29
DHFR-201ENST00000439211 DBNDD1Q9H9R9 158 aa16.87■□□□□ 0.29
DHFR-201ENST00000439211 DBR1Q9UK59 544 aaKnown RBP16.87■□□□□ 0.29
DHFR-201ENST00000439211 MED24O75448 989 aa16.87■□□□□ 0.29
DHFR-201ENST00000439211 ZNF211Q13398 564 aaPredicted RBP16.87■□□□□ 0.29
DHFR-201ENST00000439211 GLYCTKQ8IVS8 523 aa16.87■□□□□ 0.29
DHFR-201ENST00000439211 SYCE1Q8N0S2 351 aa16.87■□□□□ 0.29
DHFR-201ENST00000439211 TBC1D16Q8TBP0 767 aa16.87■□□□□ 0.29
DHFR-201ENST00000439211 PURBQ96QR8 312 aaKnown RBP16.87■□□□□ 0.29
DHFR-201ENST00000439211 SMC6Q96SB8 1091 aa16.87■□□□□ 0.29
DHFR-201ENST00000439211 REEP2Q9BRK0 252 aa16.87■□□□□ 0.29
DHFR-201ENST00000439211 TAOK3Q9H2K8 898 aa16.87■□□□□ 0.29
DHFR-201ENST00000439211 CYP39A1Q9NYL5 469 aa16.87■□□□□ 0.29
DHFR-201ENST00000439211 CHD4Q14839 1912 aa16.87■□□□□ 0.29
DHFR-201ENST00000439211 RSPH10B2B2RC85 870 aa16.87■□□□□ 0.29
DHFR-201ENST00000439211 TTI1O43156 1089 aa16.87■□□□□ 0.29
DHFR-201ENST00000439211 RSPH10BP0C881 870 aa16.87■□□□□ 0.29
DHFR-201ENST00000439211 EEF2P13639 858 aaKnown RBP16.87■□□□□ 0.29
DHFR-201ENST00000439211 HNRNPH3P31942 346 aaKnown RBP16.87■□□□□ 0.29
DHFR-201ENST00000439211 CCNFP41002 786 aa16.87■□□□□ 0.29
DHFR-201ENST00000439211 PSMC6P62333 389 aa16.87■□□□□ 0.29
DHFR-201ENST00000439211 PDE1CQ14123 709 aaPredicted RBP16.87■□□□□ 0.29
DHFR-201ENST00000439211 C6orf118Q5T5N4 469 aa16.87■□□□□ 0.29
DHFR-201ENST00000439211 BARGINQ6ZT62 677 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms