RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 STRA6Q9BX79 667 aa7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 GTPBP4Q9BZE4 634 aaKnown RBP7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 NAT10Q9H0A0 1025 aaKnown RBP7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 ATP6V0A4Q9HBG4 840 aa7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 PARVGQ9HBI0 331 aa7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 OLFML3Q9NRN5 406 aa7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 HCSTQ9UBK5 93 aa7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 SEL1LQ9UBV2 794 aa7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 ZNF215Q9UL58 517 aaPredicted RBP7.76□□□□□ -1.17
LSM3P3-201ENST00000436601 COL1A2P08123 1366 aa7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 PLXNA1Q9UIW2 1896 aa7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 GOLGA6L3A6NEY3 463 aa7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 MSCO60682 206 aa7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 ASGR1P07306 291 aa7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 SMIM10L2AP0DMW4 78 aa7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 SMIM10L2BP0DMW5 78 aa7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 MAPTP10636 758 aaKnown RBP7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 TCF3P15923 654 aa7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 GLRA2P23416 452 aa7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 HOXD13P35453 343 aa7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 NPTX2P47972 431 aa7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 CTCFP49711 727 aaPredicted RBP7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 PMS1P54277 932 aaKnown RBP7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 PEX3P56589 373 aa7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 CHMP4BP1P59074 171 aa7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 PSMA6P60900 246 aaKnown RBP7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 IGBP1P78318 339 aa7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 ADAM17P78536 824 aa7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 TBC1D8BQ0IIM8 1120 aa7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 PPFIA1Q13136 1202 aa7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 GRIK4Q16099 956 aa7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 KCNA10Q16322 511 aa7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 ZC2HC1CQ53FD0 456 aaPredicted RBP7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 PPP1R26Q5T8A7 1209 aaPredicted RBP7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 KLHL10Q6JEL2 608 aa7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 ALKBH2Q6NS38 261 aa7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 MTHFD1LQ6UB35 978 aa7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 CTU1Q7Z7A3 348 aaKnown RBP7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 MYOCDQ8IZQ8 938 aa7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 GUF1Q8N442 669 aaKnown RBP7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 LRRC71Q8N4P6 559 aa7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 AOPEPQ8N6M6 819 aa7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 LINC01465Q8N7H1 131 aa7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 ENOX1Q8TC92 643 aaKnown RBP7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 ZNF507Q8TCN5 953 aa7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 ASAP3Q8TDY4 903 aa7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 LMBR1Q8WVP7 490 aa7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 PRPF31Q8WWY3 499 aaKnown RBP7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 NELFBQ8WX92 580 aa7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 KIFAP3Q92845 792 aa7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 DHTKD1Q96HY7 919 aaPredicted RBP7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 MTG1Q9BT17 334 aaPredicted RBP7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 POLR3FQ9H1D9 316 aaPredicted RBP7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 HSD3B7Q9H2F3 369 aa7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 SEMA6BQ9H3T3 888 aa7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 MRPL44Q9H9J2 332 aaKnown RBP7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 SUGCTQ9HAC7 445 aa7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 C17orf75Q9HAS0 396 aa7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 SPC25Q9HBM1 224 aa7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 PAK6Q9NQU5 681 aaPredicted RBP7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 SETD4Q9NVD3 440 aa7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 PGPEP1Q9NXJ5 209 aa7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 SCHIP1Q9P0W5 487 aaPredicted RBP7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 LARSQ9P2J5 1176 aaKnown RBP7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 DACH1Q9UI36 760 aa7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 CTNND2Q9UQB3 1225 aa7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 GRIN2DO15399 1336 aa7.75□□□□□ -1.17
LSM3P3-201ENST00000436601 ZNFX1Q9P2E3 1918 aaKnown RBP7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 MBLAC1A4D2B0 266 aaPredicted RBP7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 RRN3P2A6NIE6 340 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 A6NJY4 79 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 IKBKBO14920 756 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 SLC16A4O15374 487 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 MAGEB2O15479 319 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 SIAH2O43255 324 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 GAS2O43903 313 aaKnown RBP7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 ZEB2O60315 1214 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 PRPF6O94906 941 aaKnown RBP7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 GCNT3O95395 438 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 GJB1P08034 283 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 CCL5P13501 91 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 HOXC8P31273 242 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 PPP1R2P41236 205 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 ACLYP53396 1101 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 SMTNP53814 917 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 NCKAP1LP55160 1127 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 STX17P56962 302 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 PAK1Q13153 545 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 BMT2Q1RMZ1 405 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 SLC9C1Q4G0N8 1177 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 SPATA1Q5VX52 437 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 IER5Q5VY09 327 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 ANKRD40Q6AI12 368 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 CENPPQ6IPU0 288 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 EFCAB12Q6NXP0 572 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 TTI2Q6NXR4 508 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 FBXO46Q6PJ61 603 aaPredicted RBP7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 HAUS6Q7Z4H7 955 aa7.74□□□□□ -1.17
LSM3P3-201ENST00000436601 RNF180Q86T96 592 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms