RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 CNR2P34972 360 aa11.76□□□□□ -0.53
CPNE1-214ENST00000435747 AK2P54819 239 aa11.76□□□□□ -0.53
CPNE1-214ENST00000435747 RNASELQ05823 741 aaKnown RBP11.76□□□□□ -0.53
CPNE1-214ENST00000435747 SRSF5Q13243 272 aaKnown RBP11.76□□□□□ -0.53
CPNE1-214ENST00000435747 FZD5Q13467 585 aa11.76□□□□□ -0.53
CPNE1-214ENST00000435747 RTN1Q16799 776 aa11.76□□□□□ -0.53
CPNE1-214ENST00000435747 PPP1R18Q6NYC8 613 aa11.76□□□□□ -0.53
CPNE1-214ENST00000435747 CEP68Q76N32 757 aa11.76□□□□□ -0.53
CPNE1-214ENST00000435747 FAM160A2Q8N612 972 aaPredicted RBP11.76□□□□□ -0.53
CPNE1-214ENST00000435747 CUL5Q93034 780 aa11.76□□□□□ -0.53
CPNE1-214ENST00000435747 IER2Q9BTL4 223 aa11.76□□□□□ -0.53
CPNE1-214ENST00000435747 GBP3Q9H0R5 595 aa11.76□□□□□ -0.53
CPNE1-214ENST00000435747 RIC8AQ9NPQ8 531 aa11.76□□□□□ -0.53
CPNE1-214ENST00000435747 BARHL2Q9NY43 387 aa11.76□□□□□ -0.53
CPNE1-214ENST00000435747 CDH7Q9ULB5 785 aa11.76□□□□□ -0.53
CPNE1-214ENST00000435747 PCDHA6Q9UN73 950 aa11.76□□□□□ -0.53
CPNE1-214ENST00000435747 WASF3Q9UPY6 502 aa11.76□□□□□ -0.53
CPNE1-214ENST00000435747 PCDHA8Q9Y5H6 950 aa11.76□□□□□ -0.53
CPNE1-214ENST00000435747 CHURC1-FNTBB4DL54 471 aa11.75□□□□□ -0.53
CPNE1-214ENST00000435747 hCG_1984214I3L0E3 225 aa11.75□□□□□ -0.53
CPNE1-214ENST00000435747 TEX28O15482 410 aa11.75□□□□□ -0.53
CPNE1-214ENST00000435747 EPB41L2O43491 1005 aaKnown RBP11.75□□□□□ -0.53
CPNE1-214ENST00000435747 HBP1O60381 514 aa11.75□□□□□ -0.53
CPNE1-214ENST00000435747 GPR32O75388 356 aa11.75□□□□□ -0.53
CPNE1-214ENST00000435747 ZNF806P0C7X5 589 aa11.75□□□□□ -0.53
CPNE1-214ENST00000435747 ADD1P35611 737 aaKnown RBP11.75□□□□□ -0.53
CPNE1-214ENST00000435747 SLC11A1P49279 550 aa11.75□□□□□ -0.53
CPNE1-214ENST00000435747 FNTBP49356 437 aa11.75□□□□□ -0.53
CPNE1-214ENST00000435747 MTMR1Q13613 665 aa11.75□□□□□ -0.53
CPNE1-214ENST00000435747 CCDC6Q16204 474 aa11.75□□□□□ -0.53
CPNE1-214ENST00000435747 NTRK3Q16288 839 aa11.75□□□□□ -0.53
CPNE1-214ENST00000435747 MAMSTRQ6ZN01 415 aa11.75□□□□□ -0.53
CPNE1-214ENST00000435747 HEATR3Q7Z4Q2 680 aa11.75□□□□□ -0.53
CPNE1-214ENST00000435747 ZNF713Q8N859 430 aaPredicted RBP11.75□□□□□ -0.53
CPNE1-214ENST00000435747 HDAC7Q8WUI4 952 aa11.75□□□□□ -0.53
CPNE1-214ENST00000435747 PHF20Q9BVI0 1012 aa11.75□□□□□ -0.53
CPNE1-214ENST00000435747 SCNM1Q9BWG6 230 aa11.75□□□□□ -0.53
CPNE1-214ENST00000435747 PRKD2Q9BZL6 878 aa11.75□□□□□ -0.53
CPNE1-214ENST00000435747 JADE2Q9NQC1 790 aa11.75□□□□□ -0.53
CPNE1-214ENST00000435747 TBC1D13Q9NVG8 400 aa11.75□□□□□ -0.53
CPNE1-214ENST00000435747 ZDHHC7Q9NXF8 308 aa11.75□□□□□ -0.53
CPNE1-214ENST00000435747 SLC9A2Q9UBY0 812 aa11.75□□□□□ -0.53
CPNE1-214ENST00000435747 NDRG2Q9UN36 371 aaKnown RBP11.75□□□□□ -0.53
CPNE1-214ENST00000435747 SSX2IPQ9Y2D8 614 aa11.75□□□□□ -0.53
CPNE1-214ENST00000435747 INPP5FQ9Y2H2 1132 aa11.75□□□□□ -0.53
CPNE1-214ENST00000435747 V9GY48 417 aaPredicted RBP11.75□□□□□ -0.53
CPNE1-214ENST00000435747 MYH9P35579 1960 aaKnown RBP11.75□□□□□ -0.53
CPNE1-214ENST00000435747 SPTA1P02549 2419 aa11.75□□□□□ -0.53
CPNE1-214ENST00000435747 GOLGA8AA7E2F4 631 aa11.74□□□□□ -0.53
CPNE1-214ENST00000435747 GOLGA8BA8MQT2 603 aa11.74□□□□□ -0.53
CPNE1-214ENST00000435747 GIPC1O14908 333 aa11.74□□□□□ -0.53
CPNE1-214ENST00000435747 AXIN1O15169 862 aa11.74□□□□□ -0.53
CPNE1-214ENST00000435747 MAFGO15525 162 aa11.74□□□□□ -0.53
CPNE1-214ENST00000435747 PAPLNO95428 1278 aa11.74□□□□□ -0.53
CPNE1-214ENST00000435747 TOP3BO95985 862 aaKnown RBP11.74□□□□□ -0.53
CPNE1-214ENST00000435747 SPATA31D3P0C874 917 aa11.74□□□□□ -0.53
CPNE1-214ENST00000435747 RPS6KB1P23443 525 aa11.74□□□□□ -0.53
CPNE1-214ENST00000435747 SLC26A2P50443 739 aa11.74□□□□□ -0.53
CPNE1-214ENST00000435747 PFKFB3Q16875 520 aaPredicted RBP11.74□□□□□ -0.53
CPNE1-214ENST00000435747 RNF43Q68DV7 783 aa11.74□□□□□ -0.53
CPNE1-214ENST00000435747 SYNE3Q6ZMZ3 975 aa11.74□□□□□ -0.53
CPNE1-214ENST00000435747 SPATA31D4Q6ZUB0 917 aa11.74□□□□□ -0.53
CPNE1-214ENST00000435747 Q6ZUG5 572 aa11.74□□□□□ -0.53
CPNE1-214ENST00000435747 PDZD3Q86UT5 571 aa11.74□□□□□ -0.53
CPNE1-214ENST00000435747 BRF1Q92994 677 aa11.74□□□□□ -0.53
CPNE1-214ENST00000435747 JAKMIP1Q96N16 626 aaKnown RBP11.74□□□□□ -0.53
CPNE1-214ENST00000435747 RPS6KC1Q96S38 1066 aa11.74□□□□□ -0.53
CPNE1-214ENST00000435747 KXD1Q9BQD3 176 aa11.74□□□□□ -0.53
CPNE1-214ENST00000435747 ARRDC1-AS1Q9H2J1 176 aa11.74□□□□□ -0.53
CPNE1-214ENST00000435747 PLEKHA4Q9H4M7 779 aa11.74□□□□□ -0.53
CPNE1-214ENST00000435747 DACT1Q9NYF0 836 aa11.74□□□□□ -0.53
CPNE1-214ENST00000435747 DNAJB4Q9UDY4 337 aa11.74□□□□□ -0.53
CPNE1-214ENST00000435747 COL1A2P08123 1366 aa11.74□□□□□ -0.53
CPNE1-214ENST00000435747 SOD2P04179 222 aa11.73□□□□□ -0.53
CPNE1-214ENST00000435747 SREBF1P36956 1147 aa11.73□□□□□ -0.53
CPNE1-214ENST00000435747 CXCL12P48061 93 aa11.73□□□□□ -0.53
CPNE1-214ENST00000435747 ACTR2P61160 394 aa11.73□□□□□ -0.53
CPNE1-214ENST00000435747 SATB1Q01826 763 aa11.73□□□□□ -0.53
CPNE1-214ENST00000435747 CACNA1EQ15878 2313 aa11.73□□□□□ -0.53
CPNE1-214ENST00000435747 NOMO2Q5JPE7 1267 aa11.73□□□□□ -0.53
CPNE1-214ENST00000435747 ZNF484Q5JVG2 852 aa11.73□□□□□ -0.53
CPNE1-214ENST00000435747 C19orf48Q6RUI8 117 aa11.73□□□□□ -0.53
CPNE1-214ENST00000435747 GLB1LQ6UWU2 654 aa11.73□□□□□ -0.53
CPNE1-214ENST00000435747 LONP2Q86WA8 852 aa11.73□□□□□ -0.53
CPNE1-214ENST00000435747 METTL13Q8N6R0 699 aa11.73□□□□□ -0.53
CPNE1-214ENST00000435747 PGBD1Q96JS3 809 aa11.73□□□□□ -0.53
CPNE1-214ENST00000435747 MXRA8Q9BRK3 442 aa11.73□□□□□ -0.53
CPNE1-214ENST00000435747 ANO3Q9BYT9 981 aa11.73□□□□□ -0.53
CPNE1-214ENST00000435747 ADAMTS10Q9H324 1103 aa11.73□□□□□ -0.53
CPNE1-214ENST00000435747 HEBP1Q9NRV9 189 aa11.73□□□□□ -0.53
CPNE1-214ENST00000435747 KCNH7Q9NS40 1196 aa11.73□□□□□ -0.53
CPNE1-214ENST00000435747 HECTD1Q9ULT8 2610 aa11.73□□□□□ -0.53
CPNE1-214ENST00000435747 IGLV3-22A0A075B6J6 115 aa11.72□□□□□ -0.53
CPNE1-214ENST00000435747 ESYT2A0FGR8 921 aa11.72□□□□□ -0.53
CPNE1-214ENST00000435747 SPDYE3A6NKU9 549 aa11.72□□□□□ -0.53
CPNE1-214ENST00000435747 MEIS1O00470 390 aa11.72□□□□□ -0.53
CPNE1-214ENST00000435747 MAN2B1O00754 1011 aa11.72□□□□□ -0.53
CPNE1-214ENST00000435747 EDIL3O43854 480 aa11.72□□□□□ -0.53
CPNE1-214ENST00000435747 GAS2O43903 313 aaKnown RBP11.72□□□□□ -0.53
CPNE1-214ENST00000435747 REC8O95072 547 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms