RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 KREMEN2Q8NCW0 462 aa16.57■□□□□ 0.24
MSH5-208ENST00000429846 SMG8Q8ND04 991 aaKnown RBP16.57■□□□□ 0.24
MSH5-208ENST00000429846 IRF2BPLQ9H1B7 796 aa16.57■□□□□ 0.24
MSH5-208ENST00000429846 MRPL17Q9NRX2 175 aaKnown RBP16.57■□□□□ 0.24
MSH5-208ENST00000429846 IPPQ9Y573 584 aa16.57■□□□□ 0.24
MSH5-208ENST00000429846 C2orf16Q68DN1 1984 aa16.57■□□□□ 0.24
MSH5-208ENST00000429846 WDFY4Q6ZS81 3184 aa16.56■□□□□ 0.24
MSH5-208ENST00000429846 SPDYE4A6NLX3 237 aa16.56■□□□□ 0.24
MSH5-208ENST00000429846 INO80B-WBP1J3KQ70 363 aa16.56■□□□□ 0.24
MSH5-208ENST00000429846 NRP1O14786 923 aa16.56■□□□□ 0.24
MSH5-208ENST00000429846 ZBTB39O15060 712 aa16.56■□□□□ 0.24
MSH5-208ENST00000429846 POMCP01189 267 aa16.56■□□□□ 0.24
MSH5-208ENST00000429846 URODP06132 367 aa16.56■□□□□ 0.24
MSH5-208ENST00000429846 KLRC2P26717 231 aa16.56■□□□□ 0.24
MSH5-208ENST00000429846 RARRES1P49788 294 aa16.56■□□□□ 0.24
MSH5-208ENST00000429846 AFF1P51825 1210 aaKnown RBP16.56■□□□□ 0.24
MSH5-208ENST00000429846 CAPSQ13938 189 aa16.56■□□□□ 0.24
MSH5-208ENST00000429846 TRIM29Q14134 588 aa16.56■□□□□ 0.24
MSH5-208ENST00000429846 IER5LQ5T953 404 aa16.56■□□□□ 0.24
MSH5-208ENST00000429846 C15orf39Q6ZRI6 1047 aa16.56■□□□□ 0.24
MSH5-208ENST00000429846 DIS3L2Q8IYB7 885 aaKnown RBP16.56■□□□□ 0.24
MSH5-208ENST00000429846 COLGALT2Q8IYK4 626 aa16.56■□□□□ 0.24
MSH5-208ENST00000429846 C12orf76Q8N812 135 aaPredicted RBP16.56■□□□□ 0.24
MSH5-208ENST00000429846 NSUN7Q8NE18 718 aaKnown RBP16.56■□□□□ 0.24
MSH5-208ENST00000429846 KLHL5Q96PQ7 755 aa16.56■□□□□ 0.24
MSH5-208ENST00000429846 HERC2P3Q9BVR0 1158 aa16.56■□□□□ 0.24
MSH5-208ENST00000429846 CSRNP2Q9H175 543 aa16.56■□□□□ 0.24
MSH5-208ENST00000429846 DPP7Q9UHL4 492 aa16.56■□□□□ 0.24
MSH5-208ENST00000429846 CACNA1HO95180 2353 aa16.55■□□□□ 0.24
MSH5-208ENST00000429846 ARL5CA6NH57 179 aa16.55■□□□□ 0.24
MSH5-208ENST00000429846 BTBD18B2RXH4 712 aa16.55■□□□□ 0.24
MSH5-208ENST00000429846 LILRB3O75022 631 aa16.55■□□□□ 0.24
MSH5-208ENST00000429846 NR1I2O75469 434 aa16.55■□□□□ 0.24
MSH5-208ENST00000429846 BRD1O95696 1058 aa16.55■□□□□ 0.24
MSH5-208ENST00000429846 ADH1AP07327 375 aa16.55■□□□□ 0.24
MSH5-208ENST00000429846 CNPP09543 421 aaKnown RBP16.55■□□□□ 0.24
MSH5-208ENST00000429846 WEE2P0C1S8 567 aa16.55■□□□□ 0.24
MSH5-208ENST00000429846 XRCC6P12956 609 aaKnown RBP eCLIP16.55■□□□□ 0.24
MSH5-208ENST00000429846 AVPR2P30518 371 aa16.55■□□□□ 0.24
MSH5-208ENST00000429846 MLH1P40692 756 aa16.55■□□□□ 0.24
MSH5-208ENST00000429846 MBTD1Q05BQ5 628 aa16.55■□□□□ 0.24
MSH5-208ENST00000429846 DSC1Q08554 894 aa16.55■□□□□ 0.24
MSH5-208ENST00000429846 TCF15Q12870 199 aa16.55■□□□□ 0.24
MSH5-208ENST00000429846 ELMSAN1Q6PJG2 1045 aa16.55■□□□□ 0.24
MSH5-208ENST00000429846 CCDC149Q6ZUS6 474 aa16.55■□□□□ 0.24
MSH5-208ENST00000429846 GPR149Q86SP6 731 aa16.55■□□□□ 0.24
MSH5-208ENST00000429846 RNF168Q8IYW5 571 aaPredicted RBP16.55■□□□□ 0.24
MSH5-208ENST00000429846 NECAB1Q8N987 351 aa16.55■□□□□ 0.24
MSH5-208ENST00000429846 ACSF2Q96CM8 615 aaPredicted RBP16.55■□□□□ 0.24
MSH5-208ENST00000429846 EIF2AQ9BY44 585 aaKnown RBP16.55■□□□□ 0.24
MSH5-208ENST00000429846 TRIM6Q9C030 488 aaPredicted RBP16.55■□□□□ 0.24
MSH5-208ENST00000429846 MARCH5Q9NX47 278 aa16.55■□□□□ 0.24
MSH5-208ENST00000429846 GIT1Q9Y2X7 761 aa16.55■□□□□ 0.24
MSH5-208ENST00000429846 DTNBO60941 627 aa16.54■□□□□ 0.24
MSH5-208ENST00000429846 LARGE1O95461 756 aa16.54■□□□□ 0.24
MSH5-208ENST00000429846 SSBP05455 408 aaKnown RBP eCLIP16.54■□□□□ 0.24
MSH5-208ENST00000429846 ARL2P36404 184 aa16.54■□□□□ 0.24
MSH5-208ENST00000429846 OR1G1P47890 313 aa16.54■□□□□ 0.24
MSH5-208ENST00000429846 VCPP55072 806 aaKnown RBP16.54■□□□□ 0.24
MSH5-208ENST00000429846 AMHR2Q16671 573 aa16.54■□□□□ 0.24
MSH5-208ENST00000429846 TMC5Q6UXY8 1006 aa16.54■□□□□ 0.24
MSH5-208ENST00000429846 OTOP3Q7RTS5 596 aa16.54■□□□□ 0.24
MSH5-208ENST00000429846 ASAP3Q8TDY4 903 aa16.54■□□□□ 0.24
MSH5-208ENST00000429846 CPB2Q96IY4 423 aa16.54■□□□□ 0.24
MSH5-208ENST00000429846 MTMR9Q96QG7 549 aa16.54■□□□□ 0.24
MSH5-208ENST00000429846 RPS6KC1Q96S38 1066 aa16.54■□□□□ 0.24
MSH5-208ENST00000429846 GAD1Q99259 594 aa16.54■□□□□ 0.24
MSH5-208ENST00000429846 PRG3Q9Y2Y8 225 aaPredicted RBP16.54■□□□□ 0.24
MSH5-208ENST00000429846 PLXNA3P51805 1871 aa16.54■□□□□ 0.24
MSH5-208ENST00000429846 EFEMP2O95967 443 aa16.53■□□□□ 0.24
MSH5-208ENST00000429846 ARF4P18085 180 aaPredicted RBP16.53■□□□□ 0.24
MSH5-208ENST00000429846 GLRA2P23416 452 aa16.53■□□□□ 0.24
MSH5-208ENST00000429846 TXKP42681 527 aa16.53■□□□□ 0.24
MSH5-208ENST00000429846 GLUD2P49448 558 aa16.53■□□□□ 0.24
MSH5-208ENST00000429846 SLC27A1Q6PCB7 646 aa16.53■□□□□ 0.24
MSH5-208ENST00000429846 CYP26C1Q6V0L0 522 aa16.53■□□□□ 0.24
MSH5-208ENST00000429846 GPR65Q8IYL9 337 aa16.53■□□□□ 0.24
MSH5-208ENST00000429846 CMASQ8NFW8 434 aaPredicted RBP16.53■□□□□ 0.24
MSH5-208ENST00000429846 PRIMPOLQ96LW4 560 aa16.53■□□□□ 0.24
MSH5-208ENST00000429846 RHOBTB2Q9BYZ6 727 aa16.53■□□□□ 0.24
MSH5-208ENST00000429846 POLR3FQ9H1D9 316 aaPredicted RBP16.53■□□□□ 0.24
MSH5-208ENST00000429846 HES2Q9Y543 173 aa16.53■□□□□ 0.24
MSH5-208ENST00000429846 MTCL1Q9Y4B5 1905 aaKnown RBP16.53■□□□□ 0.24
MSH5-208ENST00000429846 POTEMA6NI47 508 aa16.52■□□□□ 0.24
MSH5-208ENST00000429846 USO1O60763 962 aaKnown RBP16.52■□□□□ 0.24
MSH5-208ENST00000429846 C1RP00736 705 aa16.52■□□□□ 0.24
MSH5-208ENST00000429846 SCNN1GP51170 649 aa16.52■□□□□ 0.24
MSH5-208ENST00000429846 NEK4P51957 841 aa16.52■□□□□ 0.24
MSH5-208ENST00000429846 DSG1Q02413 1049 aa16.52■□□□□ 0.24
MSH5-208ENST00000429846 GRIK3Q13003 919 aa16.52■□□□□ 0.24
MSH5-208ENST00000429846 ORC2Q13416 577 aaPredicted RBP16.52■□□□□ 0.24
MSH5-208ENST00000429846 SAFBQ15424 915 aaKnown RBP eCLIP16.52■□□□□ 0.24
MSH5-208ENST00000429846 KANK3Q6NY19 840 aa16.52■□□□□ 0.24
MSH5-208ENST00000429846 MCPH1Q8NEM0 835 aa16.52■□□□□ 0.24
MSH5-208ENST00000429846 COLEC11Q9BWP8 271 aa16.52■□□□□ 0.24
MSH5-208ENST00000429846 RNF39Q9H2S5 420 aa16.52■□□□□ 0.24
MSH5-208ENST00000429846 NXF3Q9H4D5 531 aaKnown RBP16.52■□□□□ 0.24
MSH5-208ENST00000429846 TUFT1Q9NNX1 390 aa16.52■□□□□ 0.24
MSH5-208ENST00000429846 MAN1C1Q9NR34 630 aa16.52■□□□□ 0.24
MSH5-208ENST00000429846 PRMT7Q9NVM4 692 aaPredicted RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms