RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 COG2Q14746 738 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 GNPTABQ3T906 1256 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 RC3H1Q5TC82 1133 aaKnown RBP13.5□□□□□ -0.25
CPNE4-201ENST00000429747 PODNQ7Z5L7 613 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 SREK1Q8WXA9 508 aaKnown RBP13.5□□□□□ -0.25
CPNE4-201ENST00000429747 DNAJC19Q96DA6 116 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 CALN1Q9BXU9 219 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 TTYH3Q9C0H2 523 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 KLHL11Q9NVR0 708 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 NYAP2Q9P242 653 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 MAD1L1Q9Y6D9 718 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 GJA3Q9Y6H8 435 aa13.5□□□□□ -0.25
CPNE4-201ENST00000429747 CAMTA1Q9Y6Y1 1673 aa13.49□□□□□ -0.25
CPNE4-201ENST00000429747 PI4K2BG5E9Z4 385 aa13.49□□□□□ -0.25
CPNE4-201ENST00000429747 GGPS1O95749 300 aa13.49□□□□□ -0.25
CPNE4-201ENST00000429747 MT-ND3P03897 115 aa13.49□□□□□ -0.25
CPNE4-201ENST00000429747 MMP10P09238 476 aa13.49□□□□□ -0.25
CPNE4-201ENST00000429747 TMC3Q7Z5M5 1100 aa13.49□□□□□ -0.25
CPNE4-201ENST00000429747 RFX6Q8HWS3 928 aa13.49□□□□□ -0.25
CPNE4-201ENST00000429747 SLC17A8Q8NDX2 589 aa13.49□□□□□ -0.25
CPNE4-201ENST00000429747 FBXL13Q8NEE6 735 aa13.49□□□□□ -0.25
CPNE4-201ENST00000429747 LRRC37BQ96QE4 947 aa13.49□□□□□ -0.25
CPNE4-201ENST00000429747 DDX23Q9BUQ8 820 aaKnown RBP13.49□□□□□ -0.25
CPNE4-201ENST00000429747 SEMA4AQ9H3S1 761 aa13.49□□□□□ -0.25
CPNE4-201ENST00000429747 NXF1Q9UBU9 619 aaKnown RBP13.49□□□□□ -0.25
CPNE4-201ENST00000429747 POLLQ9UGP5 575 aa13.49□□□□□ -0.25
CPNE4-201ENST00000429747 MRC1P22897 1456 aa13.49□□□□□ -0.25
CPNE4-201ENST00000429747 NOP56O00567 594 aaKnown RBP13.49□□□□□ -0.25
CPNE4-201ENST00000429747 SCARA5Q6ZMJ2 495 aa13.49□□□□□ -0.25
CPNE4-201ENST00000429747 CENPUQ71F23 418 aa13.49□□□□□ -0.25
CPNE4-201ENST00000429747 PDCD7Q8N8D1 485 aaKnown RBP13.49□□□□□ -0.25
CPNE4-201ENST00000429747 HAS1Q92839 578 aa13.49□□□□□ -0.25
CPNE4-201ENST00000429747 SLC35C1Q96A29 364 aa13.49□□□□□ -0.25
CPNE4-201ENST00000429747 MKNK1Q9BUB5 465 aa13.49□□□□□ -0.25
CPNE4-201ENST00000429747 ZNF341Q9BYN7 854 aa13.49□□□□□ -0.25
CPNE4-201ENST00000429747 GINM1Q9NU53 330 aa13.49□□□□□ -0.25
CPNE4-201ENST00000429747 H0YCG3 227 aa13.49□□□□□ -0.25
CPNE4-201ENST00000429747 POLR2BP30876 1174 aaKnown RBP13.49□□□□□ -0.25
CPNE4-201ENST00000429747 PPP2R5DQ14738 602 aa13.49□□□□□ -0.25
CPNE4-201ENST00000429747 FAM160B2Q86V87 743 aa13.49□□□□□ -0.25
CPNE4-201ENST00000429747 SUPT20HQ8NEM7 779 aa13.49□□□□□ -0.25
CPNE4-201ENST00000429747 SLC20A1Q8WUM9 679 aa13.49□□□□□ -0.25
CPNE4-201ENST00000429747 CPA5Q8WXQ8 436 aa13.49□□□□□ -0.25
CPNE4-201ENST00000429747 NDC80O14777 642 aa13.48□□□□□ -0.25
CPNE4-201ENST00000429747 DIAPH2O60879 1101 aa13.48□□□□□ -0.25
CPNE4-201ENST00000429747 TFAMQ00059 246 aaKnown RBP13.48□□□□□ -0.25
CPNE4-201ENST00000429747 GPS1Q13098 491 aa13.48□□□□□ -0.25
CPNE4-201ENST00000429747 INPP4AQ96PE3 977 aaPredicted RBP13.48□□□□□ -0.25
CPNE4-201ENST00000429747 LBHD1Q9BQE6 289 aaPredicted RBP13.48□□□□□ -0.25
CPNE4-201ENST00000429747 ZWILCHQ9H900 591 aa13.48□□□□□ -0.25
CPNE4-201ENST00000429747 CPSF2Q9P2I0 782 aaKnown RBP13.48□□□□□ -0.25
CPNE4-201ENST00000429747 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.48□□□□□ -0.25
CPNE4-201ENST00000429747 ARL2BPQ9Y2Y0 163 aa13.48□□□□□ -0.25
CPNE4-201ENST00000429747 AFDNP55196 1824 aaKnown RBP13.48□□□□□ -0.25
CPNE4-201ENST00000429747 TLR3O15455 904 aaKnown RBP13.48□□□□□ -0.25
CPNE4-201ENST00000429747 APBA3O96018 575 aa13.48□□□□□ -0.25
CPNE4-201ENST00000429747 KRT81Q14533 505 aa13.48□□□□□ -0.25
CPNE4-201ENST00000429747 LDHDQ86WU2 507 aa13.48□□□□□ -0.25
CPNE4-201ENST00000429747 IQCKQ8N0W5 287 aa13.48□□□□□ -0.25
CPNE4-201ENST00000429747 MORC4Q8TE76 937 aa13.48□□□□□ -0.25
CPNE4-201ENST00000429747 SLC7A3Q8WY07 619 aa13.48□□□□□ -0.25
CPNE4-201ENST00000429747 FGFBP2Q9BYJ0 223 aa13.48□□□□□ -0.25
CPNE4-201ENST00000429747 TRIM6Q9C030 488 aaPredicted RBP13.48□□□□□ -0.25
CPNE4-201ENST00000429747 RAVER2Q9HCJ3 691 aaKnown RBP13.48□□□□□ -0.25
CPNE4-201ENST00000429747 KCNG1Q9UIX4 513 aa13.48□□□□□ -0.25
CPNE4-201ENST00000429747 TLR2O60603 784 aa13.48□□□□□ -0.25
CPNE4-201ENST00000429747 STAMBPO95630 424 aa13.48□□□□□ -0.25
CPNE4-201ENST00000429747 SLURP2P0DP57 97 aa13.48□□□□□ -0.25
CPNE4-201ENST00000429747 COILP38432 576 aaPredicted RBP13.48□□□□□ -0.25
CPNE4-201ENST00000429747 SP8Q8IXZ3 490 aa13.48□□□□□ -0.25
CPNE4-201ENST00000429747 ATG4AQ8WYN0 398 aa13.48□□□□□ -0.25
CPNE4-201ENST00000429747 RMDN3Q96TC7 470 aa13.48□□□□□ -0.25
CPNE4-201ENST00000429747 DNAI2Q9GZS0 605 aa13.48□□□□□ -0.25
CPNE4-201ENST00000429747 EIF3DO15371 548 aaKnown RBP eCLIP13.47□□□□□ -0.25
CPNE4-201ENST00000429747 MTM1Q13496 603 aa13.47□□□□□ -0.25
CPNE4-201ENST00000429747 ECM1Q16610 540 aa13.47□□□□□ -0.25
CPNE4-201ENST00000429747 C2CD6Q53TS8 623 aa13.47□□□□□ -0.25
CPNE4-201ENST00000429747 ZBTB33Q86T24 672 aa13.47□□□□□ -0.25
CPNE4-201ENST00000429747 NT5DC3Q86UY8 548 aa13.47□□□□□ -0.25
CPNE4-201ENST00000429747 SLC13A5Q86YT5 568 aaPredicted RBP13.47□□□□□ -0.25
CPNE4-201ENST00000429747 ZNF384Q8TF68 577 aa13.47□□□□□ -0.25
CPNE4-201ENST00000429747 FAM81BQ96LP2 452 aa13.47□□□□□ -0.25
CPNE4-201ENST00000429747 ZSWIM1Q9BR11 485 aa13.47□□□□□ -0.25
CPNE4-201ENST00000429747 UBXN6Q9BZV1 441 aa13.47□□□□□ -0.25
CPNE4-201ENST00000429747 TRPC6Q9Y210 931 aa13.47□□□□□ -0.25
CPNE4-201ENST00000429747 NID2Q14112 1375 aa13.47□□□□□ -0.25
CPNE4-201ENST00000429747 CNTNAP4Q9C0A0 1308 aa13.47□□□□□ -0.25
CPNE4-201ENST00000429747 OSTNP61366 133 aa13.47□□□□□ -0.25
CPNE4-201ENST00000429747 CAV1Q03135 178 aa13.47□□□□□ -0.25
CPNE4-201ENST00000429747 PHLDB3Q6NSJ2 640 aa13.47□□□□□ -0.25
CPNE4-201ENST00000429747 TRMT10CQ7L0Y3 403 aaKnown RBP13.47□□□□□ -0.25
CPNE4-201ENST00000429747 ZBED8Q8IZ13 594 aa13.47□□□□□ -0.25
CPNE4-201ENST00000429747 ATL2Q8NHH9 583 aa13.47□□□□□ -0.25
CPNE4-201ENST00000429747 CNKSR2Q8WXI2 1034 aa13.47□□□□□ -0.25
CPNE4-201ENST00000429747 TTC17Q96AE7 1141 aa13.47□□□□□ -0.25
CPNE4-201ENST00000429747 NOD2Q9HC29 1040 aa13.47□□□□□ -0.25
CPNE4-201ENST00000429747 FER1L4A9Z1Z3 1794 aa13.47□□□□□ -0.25
CPNE4-201ENST00000429747 K7ERI5 159 aa13.47□□□□□ -0.25
CPNE4-201ENST00000429747 ECE2O60344 883 aa13.47□□□□□ -0.25
CPNE4-201ENST00000429747 SDCCAG8Q86SQ7 713 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms