RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 PAGE5Q96GU1 130 aa16.29■□□□□ 0.2
TMEM248-204ENST00000424964 ZNF576Q9H609 170 aa16.29■□□□□ 0.2
TMEM248-204ENST00000424964 MRPL44Q9H9J2 332 aaKnown RBP16.29■□□□□ 0.2
TMEM248-204ENST00000424964 LAMA2P24043 3122 aaKnown RBP16.28■□□□□ 0.2
TMEM248-204ENST00000424964 TBKBP1A7MCY6 615 aa16.28■□□□□ 0.2
TMEM248-204ENST00000424964 ITGA4P13612 1032 aa16.28■□□□□ 0.2
TMEM248-204ENST00000424964 ATF7P17544 494 aaPredicted RBP16.28■□□□□ 0.2
TMEM248-204ENST00000424964 SCP2P22307 547 aa16.28■□□□□ 0.2
TMEM248-204ENST00000424964 CASP1P29466 404 aa16.28■□□□□ 0.2
TMEM248-204ENST00000424964 ZNF598Q86UK7 904 aaKnown RBP16.28■□□□□ 0.2
TMEM248-204ENST00000424964 CMTR2Q8IYT2 770 aaKnown RBP16.28■□□□□ 0.2
TMEM248-204ENST00000424964 HACE1Q8IYU2 909 aa16.28■□□□□ 0.2
TMEM248-204ENST00000424964 FIBCD1Q8N539 461 aa16.28■□□□□ 0.2
TMEM248-204ENST00000424964 BICD1Q96G01 975 aa16.28■□□□□ 0.2
TMEM248-204ENST00000424964 FAM161BQ96MY7 647 aa16.28■□□□□ 0.2
TMEM248-204ENST00000424964 ACO2Q99798 780 aaKnown RBP16.28■□□□□ 0.2
TMEM248-204ENST00000424964 TARS2Q9BW92 718 aaKnown RBP16.28■□□□□ 0.2
TMEM248-204ENST00000424964 APOL6Q9BWW8 343 aa16.28■□□□□ 0.2
TMEM248-204ENST00000424964 PDZD7Q9H5P4 517 aa16.28■□□□□ 0.2
TMEM248-204ENST00000424964 IPPQ9Y573 584 aa16.28■□□□□ 0.2
TMEM248-204ENST00000424964 TMEM265A0A087WTH1 108 aa16.27■□□□□ 0.2
TMEM248-204ENST00000424964 FRMD3A2A2Y4 597 aa16.27■□□□□ 0.2
TMEM248-204ENST00000424964 LINC01553A4QN01 128 aa16.27■□□□□ 0.2
TMEM248-204ENST00000424964 ARHGEF15O94989 841 aa16.27■□□□□ 0.2
TMEM248-204ENST00000424964 ABCD1P33897 745 aa16.27■□□□□ 0.2
TMEM248-204ENST00000424964 TAP1Q03518 808 aa16.27■□□□□ 0.2
TMEM248-204ENST00000424964 COASYQ13057 564 aa16.27■□□□□ 0.2
TMEM248-204ENST00000424964 CUL4BQ13620 913 aa16.27■□□□□ 0.2
TMEM248-204ENST00000424964 ZC2HC1CQ53FD0 456 aaPredicted RBP16.27■□□□□ 0.2
TMEM248-204ENST00000424964 EEF1DP3Q658K8 133 aa16.27■□□□□ 0.2
TMEM248-204ENST00000424964 CNNM4Q6P4Q7 775 aa16.27■□□□□ 0.2
TMEM248-204ENST00000424964 KRBA2Q6ZNG9 492 aa16.27■□□□□ 0.2
TMEM248-204ENST00000424964 ZNF720Q7Z2F6 126 aa16.27■□□□□ 0.2
TMEM248-204ENST00000424964 APBB1IPQ7Z5R6 666 aaPredicted RBP16.27■□□□□ 0.2
TMEM248-204ENST00000424964 MRPL10Q7Z7H8 261 aaKnown RBP16.27■□□□□ 0.2
TMEM248-204ENST00000424964 SP7Q8TDD2 431 aaPredicted RBP16.27■□□□□ 0.2
TMEM248-204ENST00000424964 HELQQ8TDG4 1101 aa16.27■□□□□ 0.2
TMEM248-204ENST00000424964 CCDC34Q96HJ3 373 aa16.27■□□□□ 0.2
TMEM248-204ENST00000424964 FIZ1Q96SL8 496 aa16.27■□□□□ 0.2
TMEM248-204ENST00000424964 TCHPQ9BT92 498 aa16.27■□□□□ 0.2
TMEM248-204ENST00000424964 TMEM117Q9H0C3 514 aa16.27■□□□□ 0.2
TMEM248-204ENST00000424964 SEMA6BQ9H3T3 888 aa16.27■□□□□ 0.2
TMEM248-204ENST00000424964 CERS4Q9HA82 394 aa16.27■□□□□ 0.2
TMEM248-204ENST00000424964 RNF19AQ9NV58 838 aa16.27■□□□□ 0.2
TMEM248-204ENST00000424964 TBX20Q9UMR3 447 aa16.27■□□□□ 0.2
TMEM248-204ENST00000424964 TNFSF13BQ9Y275 285 aa16.27■□□□□ 0.2
TMEM248-204ENST00000424964 HES2Q9Y543 173 aa16.27■□□□□ 0.2
TMEM248-204ENST00000424964 FNDC1Q4ZHG4 1894 aaPredicted RBP16.27■□□□□ 0.19
TMEM248-204ENST00000424964 MEIS3P2A8K0S8 358 aa16.26■□□□□ 0.19
TMEM248-204ENST00000424964 GADD45BO75293 160 aaPredicted RBP16.26■□□□□ 0.19
TMEM248-204ENST00000424964 GCNT3O95395 438 aa16.26■□□□□ 0.19
TMEM248-204ENST00000424964 MATR3P43243 847 aaKnown RBP eCLIP16.26■□□□□ 0.198e-7■■■■■ 32.6
TMEM248-204ENST00000424964 GTF2BQ00403 316 aa16.26■□□□□ 0.19
TMEM248-204ENST00000424964 DCAF4L1Q3SXM0 396 aa16.26■□□□□ 0.19
TMEM248-204ENST00000424964 ZNF568Q3ZCX4 644 aa16.26■□□□□ 0.19
TMEM248-204ENST00000424964 CLLU1OSQ5K130 101 aa16.26■□□□□ 0.19
TMEM248-204ENST00000424964 SPOUT1Q5T280 376 aaKnown RBP16.26■□□□□ 0.19
TMEM248-204ENST00000424964 GLB1LQ6UWU2 654 aa16.26■□□□□ 0.19
TMEM248-204ENST00000424964 AGMOQ6ZNB7 445 aa16.26■□□□□ 0.19
TMEM248-204ENST00000424964 UNC13DQ70J99 1090 aa16.26■□□□□ 0.19
TMEM248-204ENST00000424964 Q7L0L9 218 aa16.26■□□□□ 0.19
TMEM248-204ENST00000424964 ZBTB33Q86T24 672 aa16.26■□□□□ 0.19
TMEM248-204ENST00000424964 FMR1NBQ8N0W7 255 aaPredicted RBP16.26■□□□□ 0.19
TMEM248-204ENST00000424964 DEFB123Q8N688 67 aa16.26■□□□□ 0.19
TMEM248-204ENST00000424964 TMEM87AQ8NBN3 555 aa16.26■□□□□ 0.19
TMEM248-204ENST00000424964 SMG8Q8ND04 991 aaKnown RBP16.26■□□□□ 0.19
TMEM248-204ENST00000424964 TGS1Q96RS0 853 aaKnown RBP16.26■□□□□ 0.19
TMEM248-204ENST00000424964 TTYH1Q9H313 450 aaPredicted RBP16.26■□□□□ 0.19
TMEM248-204ENST00000424964 NXF3Q9H4D5 531 aaKnown RBP16.26■□□□□ 0.19
TMEM248-204ENST00000424964 RC3H2Q9HBD1 1191 aaKnown RBP16.26■□□□□ 0.19
TMEM248-204ENST00000424964 OLFML3Q9NRN5 406 aa16.26■□□□□ 0.19
TMEM248-204ENST00000424964 MTUS1Q9ULD2 1270 aa16.26■□□□□ 0.19
TMEM248-204ENST00000424964 INPP5FQ9Y2H2 1132 aa16.26■□□□□ 0.19
TMEM248-204ENST00000424964 PVALEFA0A1B0GWK0 134 aa16.25■□□□□ 0.19
TMEM248-204ENST00000424964 GTPBP6O43824 516 aaPredicted RBP16.25■□□□□ 0.19
TMEM248-204ENST00000424964 PRPF40AO75400 957 aaKnown RBP16.25■□□□□ 0.19
TMEM248-204ENST00000424964 LIG4P49917 911 aa16.25■□□□□ 0.19
TMEM248-204ENST00000424964 FAM160A1Q05DH4 1040 aa16.25■□□□□ 0.19
TMEM248-204ENST00000424964 KANK3Q6NY19 840 aa16.25■□□□□ 0.19
TMEM248-204ENST00000424964 ZPBP2Q6X784 338 aa16.25■□□□□ 0.19
TMEM248-204ENST00000424964 ARNTL2Q8WYA1 636 aa16.25■□□□□ 0.19
TMEM248-204ENST00000424964 KCNN1Q92952 543 aa16.25■□□□□ 0.19
TMEM248-204ENST00000424964 HPS3Q969F9 1004 aa16.25■□□□□ 0.19
TMEM248-204ENST00000424964 ZBTB45Q96K62 511 aaPredicted RBP16.25■□□□□ 0.19
TMEM248-204ENST00000424964 CASD1Q96PB1 797 aa16.25■□□□□ 0.19
TMEM248-204ENST00000424964 RNF39Q9H2S5 420 aa16.25■□□□□ 0.19
TMEM248-204ENST00000424964 ST6GALNAC4Q9H4F1 302 aa16.25■□□□□ 0.19
TMEM248-204ENST00000424964 RSAD1Q9HA92 442 aa16.25■□□□□ 0.19
TMEM248-204ENST00000424964 UBN1Q9NPG3 1134 aa16.25■□□□□ 0.19
TMEM248-204ENST00000424964 ANKFY1Q9P2R3 1169 aa16.25■□□□□ 0.19
TMEM248-204ENST00000424964 PARP2Q9UGN5 583 aa16.25■□□□□ 0.19
TMEM248-204ENST00000424964 PCDHB13Q9Y5F0 798 aa16.25■□□□□ 0.19
TMEM248-204ENST00000424964 MRPL42Q9Y6G3 142 aaKnown RBP16.25■□□□□ 0.19
TMEM248-204ENST00000424964 HNRNPDLO14979 420 aaKnown RBP16.24■□□□□ 0.19
TMEM248-204ENST00000424964 OFD1O75665 1012 aa16.24■□□□□ 0.19
TMEM248-204ENST00000424964 TOM1L1O75674 476 aa16.24■□□□□ 0.19
TMEM248-204ENST00000424964 MYL1P05976 194 aa16.24■□□□□ 0.19
TMEM248-204ENST00000424964 MYBP10242 640 aa16.24■□□□□ 0.19
TMEM248-204ENST00000424964 HARSP12081 509 aaKnown RBP16.24■□□□□ 0.19
TMEM248-204ENST00000424964 AKAP5P24588 427 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms