RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 MTMR9Q96QG7 549 aa14.45□□□□□ -0.1
VRK3-203ENST00000424804 NAP1L4Q99733 375 aaKnown RBP14.45□□□□□ -0.1
VRK3-203ENST00000424804 EIF2AK1Q9BQI3 630 aaKnown RBP14.45□□□□□ -0.1
VRK3-203ENST00000424804 GBP3Q9H0R5 595 aa14.45□□□□□ -0.1
VRK3-203ENST00000424804 RSAD1Q9HA92 442 aa14.45□□□□□ -0.1
VRK3-203ENST00000424804 F8W810 466 aa14.44□□□□□ -0.1
VRK3-203ENST00000424804 GAS2O43903 313 aaKnown RBP14.44□□□□□ -0.1
VRK3-203ENST00000424804 BAG4O95429 457 aaKnown RBP14.44□□□□□ -0.1
VRK3-203ENST00000424804 CNPP09543 421 aaKnown RBP14.44□□□□□ -0.1
VRK3-203ENST00000424804 AVPR2P30518 371 aa14.44□□□□□ -0.1
VRK3-203ENST00000424804 MTHFRP42898 656 aa14.44□□□□□ -0.1
VRK3-203ENST00000424804 CLCN4P51793 760 aa14.44□□□□□ -0.1
VRK3-203ENST00000424804 POU5F1BQ06416 359 aa14.44□□□□□ -0.1
VRK3-203ENST00000424804 DSC1Q08554 894 aa14.44□□□□□ -0.1
VRK3-203ENST00000424804 CAPSQ13938 189 aa14.44□□□□□ -0.1
VRK3-203ENST00000424804 GIT2Q14161 759 aa14.44□□□□□ -0.1
VRK3-203ENST00000424804 OTUD6AQ7L8S5 288 aa14.44□□□□□ -0.1
VRK3-203ENST00000424804 EXOC8Q8IYI6 725 aa14.44□□□□□ -0.1
VRK3-203ENST00000424804 SLFN12Q8IYM2 578 aa14.44□□□□□ -0.1
VRK3-203ENST00000424804 ZDHHC14Q8IZN3 488 aa14.44□□□□□ -0.1
VRK3-203ENST00000424804 RIPOR3Q96MK2 946 aa14.44□□□□□ -0.1
VRK3-203ENST00000424804 NECTIN4Q96NY8 510 aa14.44□□□□□ -0.1
VRK3-203ENST00000424804 TMEM175Q9BSA9 504 aa14.44□□□□□ -0.1
VRK3-203ENST00000424804 IPPQ9Y573 584 aa14.44□□□□□ -0.1
VRK3-203ENST00000424804 TDRD15B5MCY1 1934 aaKnown RBP14.44□□□□□ -0.1
VRK3-203ENST00000424804 CNTNAP2Q9UHC6 1331 aa14.43□□□□□ -0.1
VRK3-203ENST00000424804 MTCL1Q9Y4B5 1905 aaKnown RBP14.43□□□□□ -0.1
VRK3-203ENST00000424804 CARNS1A5YM72 827 aa14.43□□□□□ -0.1
VRK3-203ENST00000424804 POMCP01189 267 aa14.43□□□□□ -0.1
VRK3-203ENST00000424804 ALDH2P05091 517 aa14.43□□□□□ -0.1
VRK3-203ENST00000424804 SPATA31C1P0DKV0 1188 aa14.43□□□□□ -0.1
VRK3-203ENST00000424804 GLRA2P23416 452 aa14.43□□□□□ -0.1
VRK3-203ENST00000424804 MCM2P49736 904 aa14.43□□□□□ -0.1
VRK3-203ENST00000424804 RNASELQ05823 741 aaKnown RBP14.43□□□□□ -0.1
VRK3-203ENST00000424804 MBTD1Q05BQ5 628 aa14.43□□□□□ -0.1
VRK3-203ENST00000424804 KIAA0319Q5VV43 1072 aa14.43□□□□□ -0.1
VRK3-203ENST00000424804 CES5AQ6NT32 575 aa14.43□□□□□ -0.1
VRK3-203ENST00000424804 TPH2Q8IWU9 490 aa14.43□□□□□ -0.1
VRK3-203ENST00000424804 TCP11Q8WWU5 503 aa14.43□□□□□ -0.1
VRK3-203ENST00000424804 CPB2Q96IY4 423 aa14.43□□□□□ -0.1
VRK3-203ENST00000424804 MTRQ99707 1265 aa14.43□□□□□ -0.1
VRK3-203ENST00000424804 TMEM60Q9H2L4 133 aa14.43□□□□□ -0.1
VRK3-203ENST00000424804 ANKEF1Q9NU02 776 aa14.43□□□□□ -0.1
VRK3-203ENST00000424804 DZANK1Q9NVP4 752 aa14.43□□□□□ -0.1
VRK3-203ENST00000424804 FAN1Q9Y2M0 1017 aa14.43□□□□□ -0.1
VRK3-203ENST00000424804 NR2E1Q9Y466 385 aa14.43□□□□□ -0.1
VRK3-203ENST00000424804 KIF3AQ9Y496 699 aa14.43□□□□□ -0.1
VRK3-203ENST00000424804 HES2Q9Y543 173 aa14.43□□□□□ -0.1
VRK3-203ENST00000424804 DOCK8Q8NF50 2099 aa14.43□□□□□ -0.1
VRK3-203ENST00000424804 DOCK6Q96HP0 2047 aa14.42□□□□□ -0.1
VRK3-203ENST00000424804 ARL5CA6NH57 179 aa14.42□□□□□ -0.1
VRK3-203ENST00000424804 B4GALT5O43286 388 aa14.42□□□□□ -0.1
VRK3-203ENST00000424804 PAPLNO95428 1278 aa14.42□□□□□ -0.1
VRK3-203ENST00000424804 ASGR2P07307 311 aa14.42□□□□□ -0.1
VRK3-203ENST00000424804 ARF4P18085 180 aaPredicted RBP14.42□□□□□ -0.1
VRK3-203ENST00000424804 GJB2P29033 226 aa14.42□□□□□ -0.1
VRK3-203ENST00000424804 MCM7P33993 719 aa14.42□□□□□ -0.1
VRK3-203ENST00000424804 RARRES1P49788 294 aa14.42□□□□□ -0.1
VRK3-203ENST00000424804 CALCRLQ16602 461 aa14.42□□□□□ -0.1
VRK3-203ENST00000424804 MCTP1Q6DN14 999 aa14.42□□□□□ -0.1
VRK3-203ENST00000424804 TMC5Q6UXY8 1006 aa14.42□□□□□ -0.1
VRK3-203ENST00000424804 GPR149Q86SP6 731 aa14.42□□□□□ -0.1
VRK3-203ENST00000424804 FBXO18Q8NFZ0 1043 aa14.42□□□□□ -0.1
VRK3-203ENST00000424804 GAD1Q99259 594 aa14.42□□□□□ -0.1
VRK3-203ENST00000424804 CSRNP2Q9H175 543 aa14.42□□□□□ -0.1
VRK3-203ENST00000424804 TTC12Q9H892 705 aaPredicted RBP14.42□□□□□ -0.1
VRK3-203ENST00000424804 TSHZ2Q9NRE2 1034 aa14.42□□□□□ -0.1
VRK3-203ENST00000424804 KANSL3Q9P2N6 904 aa14.42□□□□□ -0.1
VRK3-203ENST00000424804 LIMD1Q9UGP4 676 aa14.42□□□□□ -0.1
VRK3-203ENST00000424804 PCDHA12Q9UN75 941 aa14.42□□□□□ -0.1
VRK3-203ENST00000424804 SORCS3Q9UPU3 1222 aa14.42□□□□□ -0.1
VRK3-203ENST00000424804 SMC3Q9UQE7 1217 aa14.42□□□□□ -0.1
VRK3-203ENST00000424804 USTQ9Y2C2 406 aa14.42□□□□□ -0.1
VRK3-203ENST00000424804 ZFHX2Q9C0A1 2572 aaPredicted RBP14.41□□□□□ -0.1
VRK3-203ENST00000424804 TTLL13PA6NNM8 815 aa14.41□□□□□ -0.1
VRK3-203ENST00000424804 H3BQV1 296 aa14.41□□□□□ -0.1
VRK3-203ENST00000424804 NEMFO60524 1076 aa14.41□□□□□ -0.1
VRK3-203ENST00000424804 N4BP1O75113 896 aaKnown RBP14.41□□□□□ -0.1
VRK3-203ENST00000424804 SOD2P04179 222 aa14.41□□□□□ -0.1
VRK3-203ENST00000424804 SSBP05455 408 aaKnown RBP eCLIP14.41□□□□□ -0.1
VRK3-203ENST00000424804 ITGA4P13612 1032 aa14.41□□□□□ -0.1
VRK3-203ENST00000424804 AXLP30530 894 aa14.41□□□□□ -0.1
VRK3-203ENST00000424804 CA8P35219 290 aa14.41□□□□□ -0.1
VRK3-203ENST00000424804 PTPN5P54829 565 aa14.41□□□□□ -0.1
VRK3-203ENST00000424804 MXD4Q14582 209 aaPredicted RBP14.41□□□□□ -0.1
VRK3-203ENST00000424804 ATAT1Q5SQI0 421 aa14.41□□□□□ -0.1
VRK3-203ENST00000424804 POTEGQ6S5H5 508 aa14.41□□□□□ -0.1
VRK3-203ENST00000424804 SUGP1Q8IWZ8 645 aaKnown RBP14.41□□□□□ -0.1
VRK3-203ENST00000424804 CNNM3Q8NE01 707 aa14.41□□□□□ -0.1
VRK3-203ENST00000424804 URGCPQ8TCY9 931 aa14.41□□□□□ -0.1
VRK3-203ENST00000424804 PIGOQ8TEQ8 1089 aa14.41□□□□□ -0.1
VRK3-203ENST00000424804 ZFP42Q96MM3 310 aa14.41□□□□□ -0.1
VRK3-203ENST00000424804 HERC2P3Q9BVR0 1158 aa14.41□□□□□ -0.1
VRK3-203ENST00000424804 NFKBIZQ9BYH8 718 aa14.41□□□□□ -0.1
VRK3-203ENST00000424804 RXFP1Q9HBX9 757 aa14.41□□□□□ -0.1
VRK3-203ENST00000424804 CHST7Q9NS84 486 aa14.41□□□□□ -0.1
VRK3-203ENST00000424804 DGAT1O75907 488 aa14.4□□□□□ -0.1
VRK3-203ENST00000424804 XRCC6P12956 609 aaKnown RBP eCLIP14.4□□□□□ -0.1
VRK3-203ENST00000424804 TXKP42681 527 aa14.4□□□□□ -0.1
VRK3-203ENST00000424804 SCNN1GP51170 649 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms