RNA–Protein interactions for RNA: ENST00000421862.1

AC004540.1-203, humanhuman

TSL 5 BASIC

Gene AC004540.1, Length 907 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-203ENST00000421862 ZBTB39O15060 712 aa20.76■□□□□ 0.91
AC004540.1-203ENST00000421862 ERLIN2O94905 339 aa20.76■□□□□ 0.91
AC004540.1-203ENST00000421862 FDPSP14324 419 aaKnown RBP20.76■□□□□ 0.91
AC004540.1-203ENST00000421862 CYP4A11Q02928 519 aa20.76■□□□□ 0.91
AC004540.1-203ENST00000421862 NR5A1Q13285 461 aa20.76■□□□□ 0.91
AC004540.1-203ENST00000421862 CTTNQ14247 550 aaKnown RBP20.76■□□□□ 0.91
AC004540.1-203ENST00000421862 MXD4Q14582 209 aaPredicted RBP20.76■□□□□ 0.91
AC004540.1-203ENST00000421862 AMHR2Q16671 573 aa20.76■□□□□ 0.91
AC004540.1-203ENST00000421862 TMC5Q6UXY8 1006 aa20.76■□□□□ 0.91
AC004540.1-203ENST00000421862 CCDC149Q6ZUS6 474 aa20.76■□□□□ 0.91
AC004540.1-203ENST00000421862 CMASQ8NFW8 434 aaPredicted RBP20.76■□□□□ 0.91
AC004540.1-203ENST00000421862 EIF2AQ9BY44 585 aaKnown RBP20.76■□□□□ 0.91
AC004540.1-203ENST00000421862 NFKBIZQ9BYH8 718 aa20.76■□□□□ 0.91
AC004540.1-203ENST00000421862 RHOBTB2Q9BYZ6 727 aa20.76■□□□□ 0.91
AC004540.1-203ENST00000421862 FAN1Q9Y2M0 1017 aa20.76■□□□□ 0.91
AC004540.1-203ENST00000421862 GALR2O43603 387 aaPredicted RBP20.75■□□□□ 0.91
AC004540.1-203ENST00000421862 SLITRK3O94933 977 aa20.75■□□□□ 0.91
AC004540.1-203ENST00000421862 PAPLNO95428 1278 aa20.75■□□□□ 0.91
AC004540.1-203ENST00000421862 POMCP01189 267 aa20.75■□□□□ 0.91
AC004540.1-203ENST00000421862 ALDH2P05091 517 aa20.75■□□□□ 0.91
AC004540.1-203ENST00000421862 KRT2P35908 639 aa20.75■□□□□ 0.91
AC004540.1-203ENST00000421862 ANAPC15P60006 121 aa20.75■□□□□ 0.91
AC004540.1-203ENST00000421862 MBTD1Q05BQ5 628 aa20.75■□□□□ 0.91
AC004540.1-203ENST00000421862 CAPSQ13938 189 aa20.75■□□□□ 0.91
AC004540.1-203ENST00000421862 NOTUMQ6P988 496 aa20.75■□□□□ 0.91
AC004540.1-203ENST00000421862 TMEM105Q8N8V8 129 aa20.75■□□□□ 0.91
AC004540.1-203ENST00000421862 WASF1Q92558 559 aa20.75■□□□□ 0.91
AC004540.1-203ENST00000421862 FAM193BQ96PV7 902 aaPredicted RBP20.75■□□□□ 0.91
AC004540.1-203ENST00000421862 HSD17B14Q9BPX1 270 aa20.75■□□□□ 0.91
AC004540.1-203ENST00000421862 MRPL17Q9NRX2 175 aaKnown RBP20.75■□□□□ 0.91
AC004540.1-203ENST00000421862 FAM86C1Q9NVL1 165 aa20.75■□□□□ 0.91
AC004540.1-203ENST00000421862 ORC3Q9UBD5 711 aaPredicted RBP20.75■□□□□ 0.91
AC004540.1-203ENST00000421862 VWA8A3KMH1 1905 aa20.74■□□□□ 0.91
AC004540.1-203ENST00000421862 ARL5CA6NH57 179 aa20.74■□□□□ 0.91
AC004540.1-203ENST00000421862 DTNBO60941 627 aa20.74■□□□□ 0.91
AC004540.1-203ENST00000421862 SSBP05455 408 aaKnown RBP eCLIP20.74■□□□□ 0.91
AC004540.1-203ENST00000421862 URODP06132 367 aa20.74■□□□□ 0.91
AC004540.1-203ENST00000421862 ITGA4P13612 1032 aa20.74■□□□□ 0.91
AC004540.1-203ENST00000421862 KLRC2P26717 231 aa20.74■□□□□ 0.91
AC004540.1-203ENST00000421862 MLH1P40692 756 aa20.74■□□□□ 0.91
AC004540.1-203ENST00000421862 ASAP3Q8TDY4 903 aa20.74■□□□□ 0.91
AC004540.1-203ENST00000421862 RPS6KC1Q96S38 1066 aa20.74■□□□□ 0.91
AC004540.1-203ENST00000421862 EIF2AK1Q9BQI3 630 aaKnown RBP20.74■□□□□ 0.91
AC004540.1-203ENST00000421862 CSRNP2Q9H175 543 aa20.74■□□□□ 0.91
AC004540.1-203ENST00000421862 ANKEF1Q9NU02 776 aa20.74■□□□□ 0.91
AC004540.1-203ENST00000421862 LIMD1Q9UGP4 676 aa20.74■□□□□ 0.91
AC004540.1-203ENST00000421862 VPS13AQ96RL7 3174 aa20.74■□□□□ 0.91
AC004540.1-203ENST00000421862 ZFHX2Q9C0A1 2572 aaPredicted RBP20.73■□□□□ 0.91
AC004540.1-203ENST00000421862 PROB1E7EW31 1015 aa20.73■□□□□ 0.91
AC004540.1-203ENST00000421862 ST18O60284 1047 aa20.73■□□□□ 0.91
AC004540.1-203ENST00000421862 DGAT1O75907 488 aa20.73■□□□□ 0.91
AC004540.1-203ENST00000421862 BAG4O95429 457 aaKnown RBP20.73■□□□□ 0.91
AC004540.1-203ENST00000421862 AK2P54819 239 aa20.73■□□□□ 0.91
AC004540.1-203ENST00000421862 TFDP1Q14186 410 aa20.73■□□□□ 0.91
AC004540.1-203ENST00000421862 OTOP3Q7RTS5 596 aa20.73■□□□□ 0.91
AC004540.1-203ENST00000421862 GTF3C6Q969F1 213 aa20.73■□□□□ 0.91
AC004540.1-203ENST00000421862 ACSF2Q96CM8 615 aaPredicted RBP20.73■□□□□ 0.91
AC004540.1-203ENST00000421862 GAD1Q99259 594 aa20.73■□□□□ 0.91
AC004540.1-203ENST00000421862 RNF39Q9H2S5 420 aa20.73■□□□□ 0.91
AC004540.1-203ENST00000421862 RXFP1Q9HBX9 757 aa20.73■□□□□ 0.91
AC004540.1-203ENST00000421862 MAN1C1Q9NR34 630 aa20.73■□□□□ 0.91
AC004540.1-203ENST00000421862 SSX2IPQ9Y2D8 614 aa20.73■□□□□ 0.91
AC004540.1-203ENST00000421862 PRG3Q9Y2Y8 225 aaPredicted RBP20.73■□□□□ 0.91
AC004540.1-203ENST00000421862 MARCH6O60337 910 aa20.72■□□□□ 0.91
AC004540.1-203ENST00000421862 ADH1AP07327 375 aa20.72■□□□□ 0.91
AC004540.1-203ENST00000421862 ARF4P18085 180 aaPredicted RBP20.72■□□□□ 0.91
AC004540.1-203ENST00000421862 ARL2P36404 184 aa20.72■□□□□ 0.91
AC004540.1-203ENST00000421862 GLUD2P49448 558 aa20.72■□□□□ 0.91
AC004540.1-203ENST00000421862 RARRES1P49788 294 aa20.72■□□□□ 0.91
AC004540.1-203ENST00000421862 SCNN1GP51170 649 aa20.72■□□□□ 0.91
AC004540.1-203ENST00000421862 ANKRD1Q15327 319 aa20.72■□□□□ 0.91
AC004540.1-203ENST00000421862 KIAA0319Q5VV43 1072 aa20.72■□□□□ 0.91
AC004540.1-203ENST00000421862 CWF19L1Q69YN2 538 aaKnown RBP20.72■□□□□ 0.91
AC004540.1-203ENST00000421862 TPH2Q8IWU9 490 aa20.72■□□□□ 0.91
AC004540.1-203ENST00000421862 GSTCDQ8NEC7 633 aa20.72■□□□□ 0.91
AC004540.1-203ENST00000421862 CPB2Q96IY4 423 aa20.72■□□□□ 0.91
AC004540.1-203ENST00000421862 ZFP42Q96MM3 310 aa20.72■□□□□ 0.91
AC004540.1-203ENST00000421862 BRMS1Q9HCU9 246 aa20.72■□□□□ 0.91
AC004540.1-203ENST00000421862 DUSP12Q9UNI6 340 aa20.72■□□□□ 0.91
AC004540.1-203ENST00000421862 GIT1Q9Y2X7 761 aa20.72■□□□□ 0.91
AC004540.1-203ENST00000421862 HES2Q9Y543 173 aa20.72■□□□□ 0.91
AC004540.1-203ENST00000421862 INO80B-WBP1J3KQ70 363 aa20.71■□□□□ 0.91
AC004540.1-203ENST00000421862 WNT7AO00755 349 aa20.71■□□□□ 0.91
AC004540.1-203ENST00000421862 TEX28O15482 410 aa20.71■□□□□ 0.91
AC004540.1-203ENST00000421862 GFRA3O60609 400 aa20.71■□□□□ 0.91
AC004540.1-203ENST00000421862 LARGE1O95461 756 aa20.71■□□□□ 0.91
AC004540.1-203ENST00000421862 C1RP00736 705 aa20.71■□□□□ 0.91
AC004540.1-203ENST00000421862 GLRA2P23416 452 aa20.71■□□□□ 0.91
AC004540.1-203ENST00000421862 DSG1Q02413 1049 aa20.71■□□□□ 0.91
AC004540.1-203ENST00000421862 CALCRLQ16602 461 aa20.71■□□□□ 0.91
AC004540.1-203ENST00000421862 ASTLQ6HA08 431 aaPredicted RBP20.71■□□□□ 0.91
AC004540.1-203ENST00000421862 CYP26C1Q6V0L0 522 aa20.71■□□□□ 0.91
AC004540.1-203ENST00000421862 GPR65Q8IYL9 337 aa20.71■□□□□ 0.91
AC004540.1-203ENST00000421862 NXF3Q9H4D5 531 aaKnown RBP20.71■□□□□ 0.91
AC004540.1-203ENST00000421862 CHST7Q9NS84 486 aa20.71■□□□□ 0.91
AC004540.1-203ENST00000421862 MIOSQ9NXC5 875 aa20.71■□□□□ 0.91
AC004540.1-203ENST00000421862 PCDHA12Q9UN75 941 aa20.71■□□□□ 0.91
AC004540.1-203ENST00000421862 TRIP11Q15643 1979 aa20.71■□□□□ 0.91
AC004540.1-203ENST00000421862 MYH15Q9Y2K3 1946 aa20.7■□□□□ 0.91
AC004540.1-203ENST00000421862 DOCK6Q96HP0 2047 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms