RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 A0A087WWV3 80 aa11.48□□□□□ -0.57
PTCH1-206ENST00000421141 ODC1P11926 461 aa11.48□□□□□ -0.57
PTCH1-206ENST00000421141 TAP1Q03518 808 aa11.48□□□□□ -0.57
PTCH1-206ENST00000421141 FBXL13Q8NEE6 735 aa11.48□□□□□ -0.57
PTCH1-206ENST00000421141 DNAJC12Q9UKB3 198 aa11.48□□□□□ -0.57
PTCH1-206ENST00000421141 JRKLQ9Y4A0 524 aa11.48□□□□□ -0.57
PTCH1-206ENST00000421141 HPDP32754 393 aaPredicted RBP11.48□□□□□ -0.57
PTCH1-206ENST00000421141 NME3Q13232 169 aa11.48□□□□□ -0.57
PTCH1-206ENST00000421141 SDE2Q6IQ49 451 aa11.48□□□□□ -0.57
PTCH1-206ENST00000421141 ILDR1Q86SU0 546 aaPredicted RBP11.48□□□□□ -0.57
PTCH1-206ENST00000421141 IFT43Q96FT9 208 aa11.48□□□□□ -0.57
PTCH1-206ENST00000421141 NWD2Q9ULI1 1742 aa11.48□□□□□ -0.57
PTCH1-206ENST00000421141 VWA5AO00534 786 aa11.47□□□□□ -0.57
PTCH1-206ENST00000421141 CEP72Q9P209 647 aa11.47□□□□□ -0.57
PTCH1-206ENST00000421141 LAMB4A4D0S4 1761 aa11.47□□□□□ -0.57
PTCH1-206ENST00000421141 CDK17Q00537 523 aa11.47□□□□□ -0.57
PTCH1-206ENST00000421141 MAP7Q14244 749 aa11.47□□□□□ -0.57
PTCH1-206ENST00000421141 RAB44Q7Z6P3 723 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-206ENST00000421141 KRT222Q8N1A0 295 aa11.47□□□□□ -0.57
PTCH1-206ENST00000421141 GUF1Q8N442 669 aaKnown RBP11.47□□□□□ -0.57
PTCH1-206ENST00000421141 MAGOHBQ96A72 148 aaKnown RBP11.47□□□□□ -0.57
PTCH1-206ENST00000421141 SAMSN1Q9NSI8 373 aaKnown RBP11.47□□□□□ -0.57
PTCH1-206ENST00000421141 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.47□□□□□ -0.57
PTCH1-206ENST00000421141 V9GYY5 206 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-206ENST00000421141 ZNF286BP0CG31 522 aa11.47□□□□□ -0.57
PTCH1-206ENST00000421141 PNPLA4P41247 253 aa11.47□□□□□ -0.57
PTCH1-206ENST00000421141 MAPRE1Q15691 268 aaKnown RBP11.47□□□□□ -0.57
PTCH1-206ENST00000421141 EFHBQ8N7U6 833 aa11.47□□□□□ -0.57
PTCH1-206ENST00000421141 ZNF512Q96ME7 567 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-206ENST00000421141 SEPT5Q99719 369 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-206ENST00000421141 ZWILCHQ9H900 591 aa11.47□□□□□ -0.57
PTCH1-206ENST00000421141 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.47□□□□□ -0.57
PTCH1-206ENST00000421141 PPP2R2CQ9Y2T4 447 aa11.47□□□□□ -0.57
PTCH1-206ENST00000421141 CYP26B1Q9NR63 512 aa11.47□□□□□ -0.57
PTCH1-206ENST00000421141 EMSYQ7Z589 1322 aa11.47□□□□□ -0.57
PTCH1-206ENST00000421141 ZC3H4Q9UPT8 1303 aaKnown RBP11.47□□□□□ -0.57
PTCH1-206ENST00000421141 ZBED1O96006 694 aa11.47□□□□□ -0.57
PTCH1-206ENST00000421141 RAD51Q06609 339 aa11.47□□□□□ -0.57
PTCH1-206ENST00000421141 WHAMMP3Q1A5X7 153 aa11.47□□□□□ -0.57
PTCH1-206ENST00000421141 DNAJC21Q5F1R6 531 aaKnown RBP11.47□□□□□ -0.57
PTCH1-206ENST00000421141 APOBEC3HQ6NTF7 200 aaKnown RBP11.47□□□□□ -0.57
PTCH1-206ENST00000421141 HVCN1Q96D96 273 aa11.47□□□□□ -0.57
PTCH1-206ENST00000421141 SYNPO2Q9UMS6 1093 aa11.47□□□□□ -0.57
PTCH1-206ENST00000421141 SH3BP1Q9Y3L3 701 aa11.47□□□□□ -0.57
PTCH1-206ENST00000421141 CICQ96RK0 1608 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-206ENST00000421141 GLTPD2A6NH11 291 aa11.47□□□□□ -0.57
PTCH1-206ENST00000421141 C2CD2LO14523 706 aa11.47□□□□□ -0.57
PTCH1-206ENST00000421141 PPP6R3Q5H9R7 873 aaPredicted RBP11.47□□□□□ -0.57
PTCH1-206ENST00000421141 SP110Q9HB58 689 aa11.47□□□□□ -0.57
PTCH1-206ENST00000421141 BTAF1O14981 1849 aa11.47□□□□□ -0.57
PTCH1-206ENST00000421141 LRRD1A4D1F6 860 aa11.46□□□□□ -0.57
PTCH1-206ENST00000421141 CARNS1A5YM72 827 aa11.46□□□□□ -0.57
PTCH1-206ENST00000421141 SDC4P31431 198 aa11.46□□□□□ -0.57
PTCH1-206ENST00000421141 DRP2Q13474 957 aa11.46□□□□□ -0.57
PTCH1-206ENST00000421141 KRT31Q15323 416 aa11.46□□□□□ -0.57
PTCH1-206ENST00000421141 HSPBP1Q9NZL4 362 aa11.46□□□□□ -0.57
PTCH1-206ENST00000421141 AGAP1Q9UPQ3 857 aa11.46□□□□□ -0.57
PTCH1-206ENST00000421141 ZNF189O75820 626 aaPredicted RBP11.46□□□□□ -0.57
PTCH1-206ENST00000421141 CLTAP09496 248 aa11.46□□□□□ -0.57
PTCH1-206ENST00000421141 ACOT2P49753 483 aa11.46□□□□□ -0.57
PTCH1-206ENST00000421141 C15orf52Q6ZUT6 534 aaKnown RBP11.46□□□□□ -0.57
PTCH1-206ENST00000421141 PBKQ96KB5 322 aa11.46□□□□□ -0.57
PTCH1-206ENST00000421141 HTATIP2Q9BUP3 242 aa11.46□□□□□ -0.57
PTCH1-206ENST00000421141 ANAPC7Q9UJX3 599 aa11.46□□□□□ -0.57
PTCH1-206ENST00000421141 EIF3DO15371 548 aaKnown RBP eCLIP11.46□□□□□ -0.57
PTCH1-206ENST00000421141 NPTXRO95502 500 aa11.46□□□□□ -0.57
PTCH1-206ENST00000421141 MYBL1P10243 752 aa11.46□□□□□ -0.57
PTCH1-206ENST00000421141 U2AF2P26368 475 aaKnown RBP eCLIP11.46□□□□□ -0.57
PTCH1-206ENST00000421141 FXR2P51116 673 aaKnown RBP eCLIP11.46□□□□□ -0.57
PTCH1-206ENST00000421141 ST8SIA6P61647 398 aa11.46□□□□□ -0.57
PTCH1-206ENST00000421141 SEPT6Q14141 434 aa11.46□□□□□ -0.57
PTCH1-206ENST00000421141 SGSM1Q2NKQ1 1148 aa11.46□□□□□ -0.57
PTCH1-206ENST00000421141 EFHC2Q5JST6 749 aa11.46□□□□□ -0.57
PTCH1-206ENST00000421141 ANGPTL3Q9Y5C1 460 aa11.46□□□□□ -0.57
PTCH1-206ENST00000421141 CYP2C8P10632 490 aa11.46□□□□□ -0.58
PTCH1-206ENST00000421141 PSMC1P62191 440 aaKnown RBP11.46□□□□□ -0.58
PTCH1-206ENST00000421141 WDR72Q3MJ13 1102 aa11.46□□□□□ -0.58
PTCH1-206ENST00000421141 LRRC71Q8N4P6 559 aa11.46□□□□□ -0.58
PTCH1-206ENST00000421141 PDCD6IPQ8WUM4 868 aaKnown RBP11.46□□□□□ -0.58
PTCH1-206ENST00000421141 MED15Q96RN5 788 aa11.46□□□□□ -0.58
PTCH1-206ENST00000421141 KCNQ5Q9NR82 932 aa11.46□□□□□ -0.58
PTCH1-206ENST00000421141 CDK5RAP2Q96SN8 1893 aa11.46□□□□□ -0.58
PTCH1-206ENST00000421141 PDXKO00764 312 aa11.46□□□□□ -0.58
PTCH1-206ENST00000421141 CREB3O43889 395 aa11.46□□□□□ -0.58
PTCH1-206ENST00000421141 INHBAP08476 426 aa11.46□□□□□ -0.58
PTCH1-206ENST00000421141 LCP1P13796 627 aa11.46□□□□□ -0.58
PTCH1-206ENST00000421141 STILQ15468 1287 aa11.46□□□□□ -0.58
PTCH1-206ENST00000421141 TLK2Q86UE8 772 aa11.46□□□□□ -0.58
PTCH1-206ENST00000421141 DCP1BQ8IZD4 617 aaKnown RBP11.46□□□□□ -0.58
PTCH1-206ENST00000421141 FAM163AQ96GL9 167 aaPredicted RBP11.46□□□□□ -0.58
PTCH1-206ENST00000421141 REEP2Q9BRK0 252 aa11.46□□□□□ -0.58
PTCH1-206ENST00000421141 RPA1P27694 616 aa11.46□□□□□ -0.58
PTCH1-206ENST00000421141 KCNB1Q14721 858 aa11.46□□□□□ -0.58
PTCH1-206ENST00000421141 PP2D1A8MPX8 630 aa11.45□□□□□ -0.58
PTCH1-206ENST00000421141 HSPA6P17066 643 aa11.45□□□□□ -0.58
PTCH1-206ENST00000421141 NCOA4Q13772 614 aa11.45□□□□□ -0.58
PTCH1-206ENST00000421141 DDX53Q86TM3 631 aaKnown RBP11.45□□□□□ -0.58
PTCH1-206ENST00000421141 POLR3CQ9BUI4 534 aaPredicted RBP11.45□□□□□ -0.58
PTCH1-206ENST00000421141 SENP6Q9GZR1 1112 aaPredicted RBP11.45□□□□□ -0.58
PTCH1-206ENST00000421141 SLC4A7Q9Y6M7 1214 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms