RNA–Protein interactions for RNA: ENST00000420820.6

CROCCP3-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

BASIC

Gene CROCCP3, Length 1,947 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-202ENST00000420820 SWSAP1Q6NVH7 229 aa20.49■□□□□ 0.87
CROCCP3-202ENST00000420820 TRMT1LQ7Z2T5 733 aaKnown RBP20.49■□□□□ 0.87
CROCCP3-202ENST00000420820 CCDC60Q8IWA6 550 aaPredicted RBP20.49■□□□□ 0.87
CROCCP3-202ENST00000420820 MCPH1Q8NEM0 835 aa20.49■□□□□ 0.87
CROCCP3-202ENST00000420820 ZBTB9Q96C00 473 aa20.49■□□□□ 0.87
CROCCP3-202ENST00000420820 KREMEN1Q96MU8 473 aa20.49■□□□□ 0.87
CROCCP3-202ENST00000420820 SH3GL2Q99962 352 aa20.49■□□□□ 0.87
CROCCP3-202ENST00000420820 EPB41L5Q9HCM4 733 aa20.49■□□□□ 0.87
CROCCP3-202ENST00000420820 AMFRQ9UKV5 643 aa20.49■□□□□ 0.87
CROCCP3-202ENST00000420820 ADGRA3Q8IWK6 1321 aa20.49■□□□□ 0.87
CROCCP3-202ENST00000420820 GOLGA6BA6NDN3 693 aa20.49■□□□□ 0.87
CROCCP3-202ENST00000420820 ZSCAN5CA6NGD5 496 aaPredicted RBP20.49■□□□□ 0.87
CROCCP3-202ENST00000420820 DDX3YO15523 660 aaKnown RBP20.49■□□□□ 0.87
CROCCP3-202ENST00000420820 GPC3P51654 580 aa20.49■□□□□ 0.87
CROCCP3-202ENST00000420820 ACTR2P61160 394 aa20.49■□□□□ 0.87
CROCCP3-202ENST00000420820 GUCY2DQ02846 1103 aa20.49■□□□□ 0.87
CROCCP3-202ENST00000420820 TSEN2Q8NCE0 465 aaKnown RBP20.49■□□□□ 0.87
CROCCP3-202ENST00000420820 CASKIN2Q8WXE0 1202 aa20.49■□□□□ 0.87
CROCCP3-202ENST00000420820 SEMA4DQ92854 862 aa20.49■□□□□ 0.87
CROCCP3-202ENST00000420820 THAP2Q9H0W7 228 aa20.49■□□□□ 0.87
CROCCP3-202ENST00000420820 SPON1Q9HCB6 807 aa20.49■□□□□ 0.87
CROCCP3-202ENST00000420820 TMEM8AQ9HCN3 771 aa20.49■□□□□ 0.87
CROCCP3-202ENST00000420820 TMOD4Q9NZQ9 345 aa20.49■□□□□ 0.87
CROCCP3-202ENST00000420820 NOCTQ9UK39 431 aaKnown RBP20.49■□□□□ 0.87
CROCCP3-202ENST00000420820 NOC2LQ9Y3T9 749 aaKnown RBP20.49■□□□□ 0.87
CROCCP3-202ENST00000420820 POLR2AP24928 1970 aaKnown RBP20.49■□□□□ 0.87
CROCCP3-202ENST00000420820 A0A0G2JMZ2 1700 aa20.48■□□□□ 0.87
CROCCP3-202ENST00000420820 PAPPA2Q9BXP8 1791 aa20.48■□□□□ 0.87
CROCCP3-202ENST00000420820 CCDC188H7C350 402 aa20.48■□□□□ 0.87
CROCCP3-202ENST00000420820 PHACTR2O75167 634 aa20.48■□□□□ 0.87
CROCCP3-202ENST00000420820 GTF2H1P32780 548 aa20.48■□□□□ 0.87
CROCCP3-202ENST00000420820 HIRAP54198 1017 aaPredicted RBP20.48■□□□□ 0.87
CROCCP3-202ENST00000420820 SOX10P56693 466 aa20.48■□□□□ 0.87
CROCCP3-202ENST00000420820 PAK2Q13177 524 aa20.48■□□□□ 0.87
CROCCP3-202ENST00000420820 ALS2CLQ60I27 953 aa20.48■□□□□ 0.87
CROCCP3-202ENST00000420820 KRT39Q6A163 491 aa20.48■□□□□ 0.87
CROCCP3-202ENST00000420820 MREGQ8N565 214 aa20.48■□□□□ 0.87
CROCCP3-202ENST00000420820 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.48■□□□□ 0.87
CROCCP3-202ENST00000420820 RIN2Q8WYP3 895 aaPredicted RBP20.48■□□□□ 0.87
CROCCP3-202ENST00000420820 SHC3Q92529 594 aa20.48■□□□□ 0.87
CROCCP3-202ENST00000420820 KAT5Q92993 513 aa20.48■□□□□ 0.87
CROCCP3-202ENST00000420820 CYP26B1Q9NR63 512 aa20.48■□□□□ 0.87
CROCCP3-202ENST00000420820 GGA3Q9NZ52 723 aa20.48■□□□□ 0.87
CROCCP3-202ENST00000420820 COG5Q9UP83 839 aa20.48■□□□□ 0.87
CROCCP3-202ENST00000420820 DIS3Q9Y2L1 958 aaKnown RBP20.48■□□□□ 0.87
CROCCP3-202ENST00000420820 CHRNB2P17787 502 aa20.47■□□□□ 0.87
CROCCP3-202ENST00000420820 ABCB4P21439 1286 aa20.47■□□□□ 0.87
CROCCP3-202ENST00000420820 ICAM3P32942 547 aa20.47■□□□□ 0.87
CROCCP3-202ENST00000420820 BRDTQ58F21 947 aaPredicted RBP20.47■□□□□ 0.87
CROCCP3-202ENST00000420820 TAS1R3Q7RTX0 852 aa20.47■□□□□ 0.87
CROCCP3-202ENST00000420820 RHOT2Q8IXI1 618 aa20.47■□□□□ 0.87
CROCCP3-202ENST00000420820 EPS8L1Q8TE68 723 aa20.47■□□□□ 0.87
CROCCP3-202ENST00000420820 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.47■□□□□ 0.87
CROCCP3-202ENST00000420820 SAAL1Q96ER3 474 aa20.47■□□□□ 0.87
CROCCP3-202ENST00000420820 FAM204AQ9H8W3 233 aa20.47■□□□□ 0.87
CROCCP3-202ENST00000420820 ARHGAP28Q9P2N2 729 aa20.47■□□□□ 0.87
CROCCP3-202ENST00000420820 NFU1Q9UMS0 254 aa20.47■□□□□ 0.87
CROCCP3-202ENST00000420820 SIP14410 1827 aa20.47■□□□□ 0.87
CROCCP3-202ENST00000420820 ZNFX1Q9P2E3 1918 aaKnown RBP20.47■□□□□ 0.87
CROCCP3-202ENST00000420820 ATG7O95352 703 aa20.47■□□□□ 0.87
CROCCP3-202ENST00000420820 GARTP22102 1010 aa20.47■□□□□ 0.87
CROCCP3-202ENST00000420820 PRKCEQ02156 737 aa20.47■□□□□ 0.87
CROCCP3-202ENST00000420820 MAP2K1Q02750 393 aaPredicted RBP20.47■□□□□ 0.87
CROCCP3-202ENST00000420820 PTPROQ16827 1216 aa20.47■□□□□ 0.87
CROCCP3-202ENST00000420820 GNPTABQ3T906 1256 aa20.47■□□□□ 0.87
CROCCP3-202ENST00000420820 HELQQ8TDG4 1101 aa20.47■□□□□ 0.87
CROCCP3-202ENST00000420820 ESYT3A0FGR9 886 aa20.46■□□□□ 0.87
CROCCP3-202ENST00000420820 ERICH4A6NGS2 130 aa20.46■□□□□ 0.87
CROCCP3-202ENST00000420820 SUPT20HL2P0C7V6 817 aa20.46■□□□□ 0.87
CROCCP3-202ENST00000420820 GZMAP12544 262 aa20.46■□□□□ 0.87
CROCCP3-202ENST00000420820 SP2Q02086 613 aa20.46■□□□□ 0.87
CROCCP3-202ENST00000420820 CYP24A1Q07973 514 aa20.46■□□□□ 0.87
CROCCP3-202ENST00000420820 SUPT20HL1Q3ZLR7 823 aa20.46■□□□□ 0.87
CROCCP3-202ENST00000420820 RPUSD2Q8IZ73 545 aaKnown RBP20.46■□□□□ 0.87
CROCCP3-202ENST00000420820 DNERQ8NFT8 737 aa20.46■□□□□ 0.87
CROCCP3-202ENST00000420820 PCDHB18PQ96TA0 734 aa20.46■□□□□ 0.87
CROCCP3-202ENST00000420820 ATP6V0A4Q9HBG4 840 aa20.46■□□□□ 0.87
CROCCP3-202ENST00000420820 SGPL1O95470 568 aa20.45■□□□□ 0.86
CROCCP3-202ENST00000420820 FTLP02792 175 aaPredicted RBP20.45■□□□□ 0.86
CROCCP3-202ENST00000420820 FAM153BP0C7A2 387 aa20.45■□□□□ 0.86
CROCCP3-202ENST00000420820 LMAN1P49257 510 aa20.45■□□□□ 0.86
CROCCP3-202ENST00000420820 PRPF4BQ13523 1007 aaKnown RBP20.45■□□□□ 0.86
CROCCP3-202ENST00000420820 FAM153CQ494X1 144 aa20.45■□□□□ 0.86
CROCCP3-202ENST00000420820 XKR3Q5GH77 459 aa20.45■□□□□ 0.86
CROCCP3-202ENST00000420820 DCAF12L1Q5VU92 463 aa20.45■□□□□ 0.86
CROCCP3-202ENST00000420820 MIS18BP1Q6P0N0 1132 aa20.45■□□□□ 0.86
CROCCP3-202ENST00000420820 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.45■□□□□ 0.86
CROCCP3-202ENST00000420820 NOP9Q86U38 636 aaKnown RBP20.45■□□□□ 0.86
CROCCP3-202ENST00000420820 KLHL7Q8IXQ5 586 aa20.45■□□□□ 0.86
CROCCP3-202ENST00000420820 CHST13Q8NET6 341 aa20.45■□□□□ 0.86
CROCCP3-202ENST00000420820 FAM153AQ9UHL3 310 aa20.45■□□□□ 0.86
CROCCP3-202ENST00000420820 CCDC66A2RUB6 948 aa20.45■□□□□ 0.86
CROCCP3-202ENST00000420820 SART1O43290 800 aaKnown RBP20.45■□□□□ 0.86
CROCCP3-202ENST00000420820 RTN2O75298 545 aa20.45■□□□□ 0.86
CROCCP3-202ENST00000420820 USP2O75604 605 aaPredicted RBP20.45■□□□□ 0.86
CROCCP3-202ENST00000420820 MTA2O94776 668 aa20.45■□□□□ 0.86
CROCCP3-202ENST00000420820 ABCD1P33897 745 aa20.45■□□□□ 0.86
CROCCP3-202ENST00000420820 MFAP3P55082 362 aa20.45■□□□□ 0.86
CROCCP3-202ENST00000420820 C11orf63Q6NUN7 778 aa20.45■□□□□ 0.86
CROCCP3-202ENST00000420820 IQCKQ8N0W5 287 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms