RNA–Protein interactions for RNA: ENST00000418527.1

NPHP1-205, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-205ENST00000418527 PPP2R3AQ06190 1150 aa11.68□□□□□ -0.54
NPHP1-205ENST00000418527 MAPK6Q16659 721 aa11.68□□□□□ -0.54
NPHP1-205ENST00000418527 MAN2A1Q16706 1144 aa11.68□□□□□ -0.54
NPHP1-205ENST00000418527 FAM47CQ5HY64 1035 aa11.68□□□□□ -0.54
NPHP1-205ENST00000418527 SLFN12LQ6IEE8 588 aa11.68□□□□□ -0.54
NPHP1-205ENST00000418527 CXCL17Q6UXB2 119 aa11.68□□□□□ -0.54
NPHP1-205ENST00000418527 LRRC55Q6ZSA7 311 aa11.68□□□□□ -0.54
NPHP1-205ENST00000418527 SPC24Q8NBT2 197 aa11.68□□□□□ -0.54
NPHP1-205ENST00000418527 ARRDC4Q8NCT1 418 aa11.68□□□□□ -0.54
NPHP1-205ENST00000418527 LMBR1Q8WVP7 490 aa11.68□□□□□ -0.54
NPHP1-205ENST00000418527 TATDN2Q93075 761 aa11.68□□□□□ -0.54
NPHP1-205ENST00000418527 EEF2KMTQ96G04 330 aa11.68□□□□□ -0.54
NPHP1-205ENST00000418527 PDLIM2Q96JY6 352 aa11.68□□□□□ -0.54
NPHP1-205ENST00000418527 ARMCX3Q9UH62 379 aaPredicted RBP11.68□□□□□ -0.54
NPHP1-205ENST00000418527 A0A1B0GTH6 734 aa11.67□□□□□ -0.54
NPHP1-205ENST00000418527 MYADML2A6NDP7 307 aa11.67□□□□□ -0.54
NPHP1-205ENST00000418527 INO80B-WBP1J3KQ70 363 aa11.67□□□□□ -0.54
NPHP1-205ENST00000418527 TGFB1I1O43294 461 aa11.67□□□□□ -0.54
NPHP1-205ENST00000418527 ADAMTS4O75173 837 aa11.67□□□□□ -0.54
NPHP1-205ENST00000418527 PRKCBP05771 671 aa11.67□□□□□ -0.54
NPHP1-205ENST00000418527 KRT13P13646 458 aa11.67□□□□□ -0.54
NPHP1-205ENST00000418527 CST5P28325 142 aaPredicted RBP11.67□□□□□ -0.54
NPHP1-205ENST00000418527 HOXD13P35453 343 aa11.67□□□□□ -0.54
NPHP1-205ENST00000418527 UBXN1Q04323 297 aa11.67□□□□□ -0.54
NPHP1-205ENST00000418527 NCBP1Q09161 790 aaKnown RBP11.67□□□□□ -0.54
NPHP1-205ENST00000418527 DRP2Q13474 957 aa11.67□□□□□ -0.54
NPHP1-205ENST00000418527 KCNA10Q16322 511 aa11.67□□□□□ -0.54
NPHP1-205ENST00000418527 SLC9C1Q4G0N8 1177 aa11.67□□□□□ -0.54
NPHP1-205ENST00000418527 TMC6Q7Z403 805 aa11.67□□□□□ -0.54
NPHP1-205ENST00000418527 FRMD5Q7Z6J6 570 aa11.67□□□□□ -0.54
NPHP1-205ENST00000418527 RSPH3Q86UC2 560 aa11.67□□□□□ -0.54
NPHP1-205ENST00000418527 IRF2BP1Q8IU81 584 aa11.67□□□□□ -0.54
NPHP1-205ENST00000418527 SLC9A9Q8IVB4 645 aa11.67□□□□□ -0.54
NPHP1-205ENST00000418527 C12orf56Q8IXR9 622 aa11.67□□□□□ -0.54
NPHP1-205ENST00000418527 ZC3H3Q8IXZ2 948 aaKnown RBP11.67□□□□□ -0.54
NPHP1-205ENST00000418527 FAM186BQ8IYM0 893 aa11.67□□□□□ -0.54
NPHP1-205ENST00000418527 NLRP7Q8WX94 980 aa11.67□□□□□ -0.54
NPHP1-205ENST00000418527 POMGNT1Q8WZA1 660 aa11.67□□□□□ -0.54
NPHP1-205ENST00000418527 PCMTD1Q96MG8 357 aaPredicted RBP11.67□□□□□ -0.54
NPHP1-205ENST00000418527 MKNK1Q9BUB5 465 aa11.67□□□□□ -0.54
NPHP1-205ENST00000418527 MRPL4Q9BYD3 311 aaKnown RBP11.67□□□□□ -0.54
NPHP1-205ENST00000418527 INO80BQ9C086 356 aaPredicted RBP11.67□□□□□ -0.54
NPHP1-205ENST00000418527 FAM49AQ9H0Q0 323 aaPredicted RBP11.67□□□□□ -0.54
NPHP1-205ENST00000418527 PTPN22Q9Y2R2 807 aa11.67□□□□□ -0.54
NPHP1-205ENST00000418527 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.67□□□□□ -0.54
NPHP1-205ENST00000418527 ZMYM2Q9UBW7 1377 aa11.67□□□□□ -0.54
NPHP1-205ENST00000418527 ADGRA3Q8IWK6 1321 aa11.66□□□□□ -0.54
NPHP1-205ENST00000418527 SMIM35A0A1B0GVV1 85 aa11.66□□□□□ -0.54
NPHP1-205ENST00000418527 MOXD2PA6NHM9 499 aa11.66□□□□□ -0.54
NPHP1-205ENST00000418527 LRRC10BA6NIK2 292 aa11.66□□□□□ -0.54
NPHP1-205ENST00000418527 LGALS16A8MUM7 142 aa11.66□□□□□ -0.54
NPHP1-205ENST00000418527 KBTBD13C9JR72 458 aa11.66□□□□□ -0.54
NPHP1-205ENST00000418527 M0QZ92 97 aa11.66□□□□□ -0.54
NPHP1-205ENST00000418527 KIAA0391O15091 583 aaKnown RBP11.66□□□□□ -0.54
NPHP1-205ENST00000418527 NRDCO43847 1150 aa11.66□□□□□ -0.54
NPHP1-205ENST00000418527 VTNP04004 478 aa11.66□□□□□ -0.54
NPHP1-205ENST00000418527 RPLP2P05387 115 aaKnown RBP11.66□□□□□ -0.54
NPHP1-205ENST00000418527 ASGR1P07306 291 aa11.66□□□□□ -0.54
NPHP1-205ENST00000418527 GARTP22102 1010 aa11.66□□□□□ -0.54
NPHP1-205ENST00000418527 PTENP60484 403 aa11.66□□□□□ -0.54
NPHP1-205ENST00000418527 POU5F1BQ06416 359 aa11.66□□□□□ -0.54
NPHP1-205ENST00000418527 NBPF20Q3BBV1 942 aa11.66□□□□□ -0.54
NPHP1-205ENST00000418527 VWA3BQ502W6 1294 aa11.66□□□□□ -0.54
NPHP1-205ENST00000418527 CDCA2Q69YH5 1023 aaPredicted RBP11.66□□□□□ -0.54
NPHP1-205ENST00000418527 USP37Q86T82 979 aa11.66□□□□□ -0.54
NPHP1-205ENST00000418527 ZNF410Q86VK4 478 aa11.66□□□□□ -0.54
NPHP1-205ENST00000418527 PPFIBP1Q86W92 1011 aa11.66□□□□□ -0.54
NPHP1-205ENST00000418527 NME8Q8N427 588 aa11.66□□□□□ -0.54
NPHP1-205ENST00000418527 XXYLT1Q8NBI6 393 aa11.66□□□□□ -0.54
NPHP1-205ENST00000418527 KLHDC9Q8NEP7 349 aa11.66□□□□□ -0.54
NPHP1-205ENST00000418527 SH3TC2Q8TF17 1288 aa11.66□□□□□ -0.54
NPHP1-205ENST00000418527 KCNN1Q92952 543 aa11.66□□□□□ -0.54
NPHP1-205ENST00000418527 ZFRQ96KR1 1074 aaKnown RBP11.66□□□□□ -0.54
NPHP1-205ENST00000418527 NAP1L5Q96NT1 182 aaPredicted RBP11.66□□□□□ -0.54
NPHP1-205ENST00000418527 TSEN34Q9BSV6 310 aaKnown RBP11.66□□□□□ -0.54
NPHP1-205ENST00000418527 TCHPQ9BT92 498 aa11.66□□□□□ -0.54
NPHP1-205ENST00000418527 GCOM2Q9BZD3 368 aaPredicted RBP11.66□□□□□ -0.54
NPHP1-205ENST00000418527 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.66□□□□□ -0.54
NPHP1-205ENST00000418527 PCIF1Q9H4Z3 704 aa11.66□□□□□ -0.54
NPHP1-205ENST00000418527 PRMT7Q9NVM4 692 aaPredicted RBP11.66□□□□□ -0.54
NPHP1-205ENST00000418527 HSPBP1Q9NZL4 362 aa11.66□□□□□ -0.54
NPHP1-205ENST00000418527 IMPACTQ9P2X3 320 aa11.66□□□□□ -0.54
NPHP1-205ENST00000418527 HDAC6Q9UBN7 1215 aa11.66□□□□□ -0.54
NPHP1-205ENST00000418527 MBLAC1A4D2B0 266 aaPredicted RBP11.65□□□□□ -0.54
NPHP1-205ENST00000418527 LDHAP00338 332 aaKnown RBP11.65□□□□□ -0.54
NPHP1-205ENST00000418527 PIGRP01833 764 aa11.65□□□□□ -0.54
NPHP1-205ENST00000418527 MARSP56192 900 aaKnown RBP11.65□□□□□ -0.54
NPHP1-205ENST00000418527 GSDMDP57764 484 aa11.65□□□□□ -0.54
NPHP1-205ENST00000418527 PRPF4BQ13523 1007 aaKnown RBP11.65□□□□□ -0.54
NPHP1-205ENST00000418527 NR1I3Q14994 352 aa11.65□□□□□ -0.54
NPHP1-205ENST00000418527 DCAF17Q5H9S7 520 aaPredicted RBP11.65□□□□□ -0.54
NPHP1-205ENST00000418527 MARCH8Q5T0T0 291 aa11.65□□□□□ -0.54
NPHP1-205ENST00000418527 TCERG1LQ5VWI1 586 aa11.65□□□□□ -0.54
NPHP1-205ENST00000418527 SPECC1LQ69YQ0 1117 aa11.65□□□□□ -0.54
NPHP1-205ENST00000418527 TAF2Q6P1X5 1199 aa11.65□□□□□ -0.54
NPHP1-205ENST00000418527 ZPBP2Q6X784 338 aa11.65□□□□□ -0.54
NPHP1-205ENST00000418527 APBB1IPQ7Z5R6 666 aaPredicted RBP11.65□□□□□ -0.54
NPHP1-205ENST00000418527 SRGAP1Q7Z6B7 1085 aa11.65□□□□□ -0.54
NPHP1-205ENST00000418527 VSTM4Q8IW00 320 aa11.65□□□□□ -0.54
NPHP1-205ENST00000418527 KIAA0319LQ8IZA0 1049 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms