RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 SAMD11Q96NU1 681 aa25.38■■□□□ 1.65
SMARCB1-205ENST00000417137 EIF2AQ9BY44 585 aaKnown RBP25.38■■□□□ 1.65
SMARCB1-205ENST00000417137 TRIM9Q9C026 710 aa25.38■■□□□ 1.65
SMARCB1-205ENST00000417137 TTYH1Q9H313 450 aaPredicted RBP25.38■■□□□ 1.65
SMARCB1-205ENST00000417137 MTMR10Q9NXD2 777 aa25.38■■□□□ 1.65
SMARCB1-205ENST00000417137 RWDD3Q9Y3V2 267 aa25.38■■□□□ 1.65
SMARCB1-205ENST00000417137 ITGA4P13612 1032 aa25.37■■□□□ 1.65
SMARCB1-205ENST00000417137 ATF7P17544 494 aaPredicted RBP25.37■■□□□ 1.65
SMARCB1-205ENST00000417137 NT5DC1Q5TFE4 455 aa25.37■■□□□ 1.65
SMARCB1-205ENST00000417137 GLB1LQ6UWU2 654 aa25.37■■□□□ 1.65
SMARCB1-205ENST00000417137 Q7L0L9 218 aa25.37■■□□□ 1.65
SMARCB1-205ENST00000417137 SFR1Q86XK3 245 aa25.37■■□□□ 1.65
SMARCB1-205ENST00000417137 PDZD7Q9H5P4 517 aa25.37■■□□□ 1.65
SMARCB1-205ENST00000417137 TNFSF13BQ9Y275 285 aa25.37■■□□□ 1.65
SMARCB1-205ENST00000417137 IPPQ9Y573 584 aa25.37■■□□□ 1.65
SMARCB1-205ENST00000417137 NPTXRO95502 500 aa25.36■■□□□ 1.65
SMARCB1-205ENST00000417137 AFMP43652 599 aa25.36■■□□□ 1.65
SMARCB1-205ENST00000417137 ERVK-21P61565 698 aa25.36■■□□□ 1.65
SMARCB1-205ENST00000417137 ASIC1P78348 528 aa25.36■■□□□ 1.65
SMARCB1-205ENST00000417137 DCAF4L1Q3SXM0 396 aa25.36■■□□□ 1.65
SMARCB1-205ENST00000417137 LONRF3Q496Y0 759 aa25.36■■□□□ 1.65
SMARCB1-205ENST00000417137 PAN2Q504Q3 1202 aaKnown RBP25.36■■□□□ 1.65
SMARCB1-205ENST00000417137 TAS1R3Q7RTX0 852 aa25.36■■□□□ 1.65
SMARCB1-205ENST00000417137 CDR2LQ86X02 465 aaPredicted RBP25.36■■□□□ 1.65
SMARCB1-205ENST00000417137 FAM161BQ96MY7 647 aa25.36■■□□□ 1.65
SMARCB1-205ENST00000417137 ACO2Q99798 780 aaKnown RBP25.36■■□□□ 1.65
SMARCB1-205ENST00000417137 ST6GALNAC4Q9H4F1 302 aa25.36■■□□□ 1.65
SMARCB1-205ENST00000417137 MRPL44Q9H9J2 332 aaKnown RBP25.36■■□□□ 1.65
SMARCB1-205ENST00000417137 TBX20Q9UMR3 447 aa25.36■■□□□ 1.65
SMARCB1-205ENST00000417137 A0A0C4DFX4 3053 aa25.35■■□□□ 1.65
SMARCB1-205ENST00000417137 FRMD3A2A2Y4 597 aa25.35■■□□□ 1.65
SMARCB1-205ENST00000417137 TTLL13PA6NNM8 815 aa25.35■■□□□ 1.65
SMARCB1-205ENST00000417137 ACTN4O43707 911 aaKnown RBP25.35■■□□□ 1.65
SMARCB1-205ENST00000417137 MYL1P05976 194 aa25.35■■□□□ 1.65
SMARCB1-205ENST00000417137 GATMP50440 423 aa25.35■■□□□ 1.65
SMARCB1-205ENST00000417137 GTF2BQ00403 316 aa25.35■■□□□ 1.65
SMARCB1-205ENST00000417137 ZNF720Q7Z2F6 126 aa25.35■■□□□ 1.65
SMARCB1-205ENST00000417137 SMG8Q8ND04 991 aaKnown RBP25.35■■□□□ 1.65
SMARCB1-205ENST00000417137 LPPQ93052 612 aa25.35■■□□□ 1.65
SMARCB1-205ENST00000417137 CASD1Q96PB1 797 aa25.35■■□□□ 1.65
SMARCB1-205ENST00000417137 TCHPQ9BT92 498 aa25.35■■□□□ 1.65
SMARCB1-205ENST00000417137 TARS2Q9BW92 718 aaKnown RBP25.35■■□□□ 1.65
SMARCB1-205ENST00000417137 MRPL9Q9BYD2 267 aaKnown RBP25.35■■□□□ 1.65
SMARCB1-205ENST00000417137 OLFML3Q9NRN5 406 aa25.35■■□□□ 1.65
SMARCB1-205ENST00000417137 USP20Q9Y2K6 914 aa25.35■■□□□ 1.65
SMARCB1-205ENST00000417137 PTPRSQ13332 1948 aa25.35■■□□□ 1.65
SMARCB1-205ENST00000417137 ARHGEF15O94989 841 aa25.34■■□□□ 1.65
SMARCB1-205ENST00000417137 ZNF202O95125 648 aa25.34■■□□□ 1.65
SMARCB1-205ENST00000417137 NMT1P30419 496 aaKnown RBP25.34■■□□□ 1.65
SMARCB1-205ENST00000417137 CLLU1OSQ5K130 101 aa25.34■■□□□ 1.65
SMARCB1-205ENST00000417137 ZPBP2Q6X784 338 aa25.34■■□□□ 1.65
SMARCB1-205ENST00000417137 HELQQ8TDG4 1101 aa25.34■■□□□ 1.65
SMARCB1-205ENST00000417137 BICD1Q96G01 975 aa25.34■■□□□ 1.65
SMARCB1-205ENST00000417137 PAGE5Q96GU1 130 aa25.34■■□□□ 1.65
SMARCB1-205ENST00000417137 FIZ1Q96SL8 496 aa25.34■■□□□ 1.65
SMARCB1-205ENST00000417137 GOLPH3LQ9H4A5 285 aa25.34■■□□□ 1.65
SMARCB1-205ENST00000417137 RSAD1Q9HA92 442 aa25.34■■□□□ 1.65
SMARCB1-205ENST00000417137 RNF19AQ9NV58 838 aa25.34■■□□□ 1.65
SMARCB1-205ENST00000417137 PCDHB13Q9Y5F0 798 aa25.34■■□□□ 1.65
SMARCB1-205ENST00000417137 TCHHQ07283 1943 aa25.33■■□□□ 1.65
SMARCB1-205ENST00000417137 PVALEFA0A1B0GWK0 134 aa25.33■■□□□ 1.65
SMARCB1-205ENST00000417137 EDN1P05305 212 aa25.33■■□□□ 1.65
SMARCB1-205ENST00000417137 ALCAMQ13740 583 aa25.33■■□□□ 1.65
SMARCB1-205ENST00000417137 GRIN2CQ14957 1233 aa25.33■■□□□ 1.65
SMARCB1-205ENST00000417137 SPOUT1Q5T280 376 aaKnown RBP25.33■■□□□ 1.65
SMARCB1-205ENST00000417137 KANK3Q6NY19 840 aa25.33■■□□□ 1.65
SMARCB1-205ENST00000417137 AGMOQ6ZNB7 445 aa25.33■■□□□ 1.65
SMARCB1-205ENST00000417137 STXBP4Q6ZWJ1 553 aa25.33■■□□□ 1.65
SMARCB1-205ENST00000417137 TMEM192Q8IY95 271 aa25.33■■□□□ 1.65
SMARCB1-205ENST00000417137 LRRC43Q8N309 656 aa25.33■■□□□ 1.65
SMARCB1-205ENST00000417137 URGCPQ8TCY9 931 aa25.33■■□□□ 1.65
SMARCB1-205ENST00000417137 ARNTL2Q8WYA1 636 aa25.33■■□□□ 1.65
SMARCB1-205ENST00000417137 CLP1Q92989 425 aaKnown RBP25.33■■□□□ 1.65
SMARCB1-205ENST00000417137 HVCN1Q96D96 273 aa25.33■■□□□ 1.65
SMARCB1-205ENST00000417137 CERS4Q9HA82 394 aa25.33■■□□□ 1.65
SMARCB1-205ENST00000417137 AAASQ9NRG9 546 aa25.33■■□□□ 1.65
SMARCB1-205ENST00000417137 KANSL3Q9P2N6 904 aa25.33■■□□□ 1.65
SMARCB1-205ENST00000417137 GIT1Q9Y2X7 761 aa25.33■■□□□ 1.65
SMARCB1-205ENST00000417137 MRPL42Q9Y6G3 142 aaKnown RBP25.33■■□□□ 1.65
SMARCB1-205ENST00000417137 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.32■■□□□ 1.64
SMARCB1-205ENST00000417137 OFD1O75665 1012 aa25.32■■□□□ 1.64
SMARCB1-205ENST00000417137 TOM1L1O75674 476 aa25.32■■□□□ 1.64
SMARCB1-205ENST00000417137 RB1P06400 928 aa25.32■■□□□ 1.64
SMARCB1-205ENST00000417137 BMPR1AP36894 532 aa25.32■■□□□ 1.64
SMARCB1-205ENST00000417137 COASYQ13057 564 aa25.32■■□□□ 1.64
SMARCB1-205ENST00000417137 NOMO2Q5JPE7 1267 aa25.32■■□□□ 1.64
SMARCB1-205ENST00000417137 EEF1DP3Q658K8 133 aa25.32■■□□□ 1.64
SMARCB1-205ENST00000417137 UNC13DQ70J99 1090 aa25.32■■□□□ 1.64
SMARCB1-205ENST00000417137 APOL6Q9BWW8 343 aa25.32■■□□□ 1.64
SMARCB1-205ENST00000417137 BLZF1Q9H2G9 400 aa25.32■■□□□ 1.64
SMARCB1-205ENST00000417137 PTPRHQ9HD43 1115 aa25.32■■□□□ 1.64
SMARCB1-205ENST00000417137 TYW1Q9NV66 732 aaKnown RBP25.32■■□□□ 1.64
SMARCB1-205ENST00000417137 TBC1D7Q9P0N9 293 aa25.32■■□□□ 1.64
SMARCB1-205ENST00000417137 PARP2Q9UGN5 583 aa25.32■■□□□ 1.64
SMARCB1-205ENST00000417137 EXOC7Q9UPT5 735 aa25.32■■□□□ 1.64
SMARCB1-205ENST00000417137 HES2Q9Y543 173 aa25.32■■□□□ 1.64
SMARCB1-205ENST00000417137 COL4A6Q14031 1691 aa25.32■■□□□ 1.64
SMARCB1-205ENST00000417137 GCNT3O95395 438 aa25.31■■□□□ 1.64
SMARCB1-205ENST00000417137 LIG4P49917 911 aa25.31■■□□□ 1.64
SMARCB1-205ENST00000417137 ZNF568Q3ZCX4 644 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms