RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 DTWD2Q8NBA8 298 aa14.17□□□□□ -0.14
CHRNA1-205ENST00000409542 RNF214Q8ND24 703 aa14.17□□□□□ -0.14
CHRNA1-205ENST00000409542 LEO1Q8WVC0 666 aaPredicted RBP14.17□□□□□ -0.14
CHRNA1-205ENST00000409542 SLC5A5Q92911 643 aa14.17□□□□□ -0.14
CHRNA1-205ENST00000409542 PHKBQ93100 1093 aa14.17□□□□□ -0.14
CHRNA1-205ENST00000409542 SPATA32Q96LK8 384 aa14.17□□□□□ -0.14
CHRNA1-205ENST00000409542 NIFKQ9BYG3 293 aaKnown RBP14.17□□□□□ -0.14
CHRNA1-205ENST00000409542 SFXN1Q9H9B4 322 aa14.17□□□□□ -0.14
CHRNA1-205ENST00000409542 SEPT9Q9UHD8 586 aaPredicted RBP14.17□□□□□ -0.14
CHRNA1-205ENST00000409542 NOL7Q9UMY1 257 aaKnown RBP14.17□□□□□ -0.14
CHRNA1-205ENST00000409542 PIN4Q9Y237 131 aaKnown RBP14.17□□□□□ -0.14
CHRNA1-205ENST00000409542 KRBA1A5PL33 1030 aa14.16□□□□□ -0.14
CHRNA1-205ENST00000409542 PRPF3O43395 683 aaKnown RBP14.16□□□□□ -0.14
CHRNA1-205ENST00000409542 GAS7O60861 476 aa14.16□□□□□ -0.14
CHRNA1-205ENST00000409542 PSMD10O75832 226 aa14.16□□□□□ -0.14
CHRNA1-205ENST00000409542 KLRC2P26717 231 aa14.16□□□□□ -0.14
CHRNA1-205ENST00000409542 PDIA3P30101 505 aaKnown RBP14.16□□□□□ -0.14
CHRNA1-205ENST00000409542 RNASELQ05823 741 aaKnown RBP14.16□□□□□ -0.14
CHRNA1-205ENST00000409542 GIT2Q14161 759 aa14.16□□□□□ -0.14
CHRNA1-205ENST00000409542 OTOP3Q7RTS5 596 aa14.16□□□□□ -0.14
CHRNA1-205ENST00000409542 RHPN2Q8IUC4 686 aa14.16□□□□□ -0.14
CHRNA1-205ENST00000409542 ACSF2Q96CM8 615 aaPredicted RBP14.16□□□□□ -0.14
CHRNA1-205ENST00000409542 TEKT3Q9BXF9 490 aa14.16□□□□□ -0.14
CHRNA1-205ENST00000409542 DDX19AQ9NUU7 478 aaKnown RBP14.16□□□□□ -0.14
CHRNA1-205ENST00000409542 ZNF623O75123 536 aa14.15□□□□□ -0.14
CHRNA1-205ENST00000409542 CFHP08603 1231 aa14.15□□□□□ -0.14
CHRNA1-205ENST00000409542 LETM2Q2VYF4 491 aa14.15□□□□□ -0.14
CHRNA1-205ENST00000409542 LRCH2Q5VUJ6 765 aa14.15□□□□□ -0.14
CHRNA1-205ENST00000409542 GLB1LQ6UWU2 654 aa14.15□□□□□ -0.14
CHRNA1-205ENST00000409542 B3GNT9Q6UX72 402 aa14.15□□□□□ -0.14
CHRNA1-205ENST00000409542 ERMP1Q7Z2K6 904 aa14.15□□□□□ -0.14
CHRNA1-205ENST00000409542 PPFIBP1Q86W92 1011 aa14.15□□□□□ -0.14
CHRNA1-205ENST00000409542 RIT2Q99578 217 aa14.15□□□□□ -0.14
CHRNA1-205ENST00000409542 VPS54Q9P1Q0 977 aa14.15□□□□□ -0.14
CHRNA1-205ENST00000409542 SUCLA2Q9P2R7 463 aaPredicted RBP14.15□□□□□ -0.14
CHRNA1-205ENST00000409542 FBXL21Q9UKT6 434 aa14.15□□□□□ -0.14
CHRNA1-205ENST00000409542 CFAP45Q9UL16 551 aa14.15□□□□□ -0.14
CHRNA1-205ENST00000409542 DNAH14Q0VDD8 3507 aa14.14□□□□□ -0.15
CHRNA1-205ENST00000409542 MAFO75444 373 aaPredicted RBP14.14□□□□□ -0.15
CHRNA1-205ENST00000409542 SFPQP23246 707 aaKnown RBP eCLIP14.14□□□□□ -0.15
CHRNA1-205ENST00000409542 MSNP26038 577 aaKnown RBP14.14□□□□□ -0.15
CHRNA1-205ENST00000409542 GNA11P29992 359 aa14.14□□□□□ -0.15
CHRNA1-205ENST00000409542 SFNP31947 248 aa14.14□□□□□ -0.15
CHRNA1-205ENST00000409542 JAK3P52333 1124 aa14.14□□□□□ -0.15
CHRNA1-205ENST00000409542 RCAN1P53805 252 aa14.14□□□□□ -0.15
CHRNA1-205ENST00000409542 NTRK3Q16288 839 aa14.14□□□□□ -0.15
CHRNA1-205ENST00000409542 XKR3Q5GH77 459 aa14.14□□□□□ -0.15
CHRNA1-205ENST00000409542 PLA2G4FQ68DD2 849 aa14.14□□□□□ -0.15
CHRNA1-205ENST00000409542 FAM173BQ6P4H8 233 aa14.14□□□□□ -0.15
CHRNA1-205ENST00000409542 POTEGQ6S5H5 508 aa14.14□□□□□ -0.15
CHRNA1-205ENST00000409542 CATSPER4Q7RTX7 472 aa14.14□□□□□ -0.15
CHRNA1-205ENST00000409542 MIER3Q7Z3K6 550 aa14.14□□□□□ -0.15
CHRNA1-205ENST00000409542 ZNF579Q8NAF0 562 aaKnown RBP14.14□□□□□ -0.15
CHRNA1-205ENST00000409542 ST13P5Q8NFI4 369 aaPredicted RBP14.14□□□□□ -0.15
CHRNA1-205ENST00000409542 MYADMQ96S97 322 aa14.14□□□□□ -0.15
CHRNA1-205ENST00000409542 RTP3Q9BQQ7 232 aa14.14□□□□□ -0.15
CHRNA1-205ENST00000409542 NUP62CLQ9H1M0 184 aa14.14□□□□□ -0.15
CHRNA1-205ENST00000409542 MINDY3Q9H8M7 445 aa14.14□□□□□ -0.15
CHRNA1-205ENST00000409542 IFT122Q9HBG6 1241 aa14.14□□□□□ -0.15
CHRNA1-205ENST00000409542 PCDHB2Q9Y5E7 798 aa14.14□□□□□ -0.15
CHRNA1-205ENST00000409542 EP300Q09472 2414 aaPredicted RBP14.13□□□□□ -0.15
CHRNA1-205ENST00000409542 CCDC195A0A1B0GUA6 201 aa14.13□□□□□ -0.15
CHRNA1-205ENST00000409542 GOLGA6L4A6NEF3 574 aa14.13□□□□□ -0.15
CHRNA1-205ENST00000409542 SPDYE4A6NLX3 237 aa14.13□□□□□ -0.15
CHRNA1-205ENST00000409542 C2CD2LO14523 706 aa14.13□□□□□ -0.15
CHRNA1-205ENST00000409542 NRP1O14786 923 aa14.13□□□□□ -0.15
CHRNA1-205ENST00000409542 TDP2O95551 362 aa14.13□□□□□ -0.15
CHRNA1-205ENST00000409542 POMCP01189 267 aa14.13□□□□□ -0.15
CHRNA1-205ENST00000409542 CCDC192P0DO97 292 aa14.13□□□□□ -0.15
CHRNA1-205ENST00000409542 LIG1P18858 919 aa14.13□□□□□ -0.15
CHRNA1-205ENST00000409542 UBXN11Q5T124 520 aa14.13□□□□□ -0.15
CHRNA1-205ENST00000409542 RBM43Q6ZSC3 357 aaKnown RBP14.13□□□□□ -0.15
CHRNA1-205ENST00000409542 ANO5Q75V66 913 aa14.13□□□□□ -0.15
CHRNA1-205ENST00000409542 ZNF410Q86VK4 478 aa14.13□□□□□ -0.15
CHRNA1-205ENST00000409542 CCDC12Q8WUD4 166 aaPredicted RBP14.13□□□□□ -0.15
CHRNA1-205ENST00000409542 RIN2Q8WYP3 895 aaPredicted RBP14.13□□□□□ -0.15
CHRNA1-205ENST00000409542 NLRP4Q96MN2 994 aa14.13□□□□□ -0.15
CHRNA1-205ENST00000409542 EMILIN2Q9BXX0 1053 aa14.13□□□□□ -0.15
CHRNA1-205ENST00000409542 CLSTN2Q9H4D0 955 aa14.13□□□□□ -0.15
CHRNA1-205ENST00000409542 MAN1C1Q9NR34 630 aa14.13□□□□□ -0.15
CHRNA1-205ENST00000409542 MARCH5Q9NX47 278 aa14.13□□□□□ -0.15
CHRNA1-205ENST00000409542 ZKSCAN5Q9Y2L8 839 aa14.13□□□□□ -0.15
CHRNA1-205ENST00000409542 R4GN57 208 aa14.13□□□□□ -0.15
CHRNA1-205ENST00000409542 CACNA1AO00555 2505 aa14.12□□□□□ -0.15
CHRNA1-205ENST00000409542 F8W810 466 aa14.12□□□□□ -0.15
CHRNA1-205ENST00000409542 STK25O00506 426 aa14.12□□□□□ -0.15
CHRNA1-205ENST00000409542 ZNF500O60304 480 aaPredicted RBP14.12□□□□□ -0.15
CHRNA1-205ENST00000409542 RFPL2O75678 378 aa14.12□□□□□ -0.15
CHRNA1-205ENST00000409542 SKIP12755 728 aa14.12□□□□□ -0.15
CHRNA1-205ENST00000409542 HOXA11P31270 313 aaPredicted RBP14.12□□□□□ -0.15
CHRNA1-205ENST00000409542 USP11P51784 963 aa14.12□□□□□ -0.15
CHRNA1-205ENST00000409542 NPEPPSP55786 919 aa14.12□□□□□ -0.15
CHRNA1-205ENST00000409542 Q4G0T1 1027 aa14.12□□□□□ -0.15
CHRNA1-205ENST00000409542 C15orf39Q6ZRI6 1047 aa14.12□□□□□ -0.15
CHRNA1-205ENST00000409542 MRPL10Q7Z7H8 261 aaKnown RBP14.12□□□□□ -0.15
CHRNA1-205ENST00000409542 SLC44A3Q8N4M1 653 aa14.12□□□□□ -0.15
CHRNA1-205ENST00000409542 TBCKQ8TEA7 893 aa14.12□□□□□ -0.15
CHRNA1-205ENST00000409542 RMDN1Q96DB5 314 aa14.12□□□□□ -0.15
CHRNA1-205ENST00000409542 MRPL17Q9NRX2 175 aaKnown RBP14.12□□□□□ -0.15
CHRNA1-205ENST00000409542 AGPAT5Q9NUQ2 364 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms