RNA–Protein interactions for RNA: ENST00000409159.2

RAB1C-201, Transcript of RAB1C, member RAS oncogene family pseudogene, humanhuman

BASIC

Gene RAB1C, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1C-201ENST00000409159 PRPF4BQ13523 1007 aaKnown RBP12.24□□□□□ -0.45
RAB1C-201ENST00000409159 SURF1Q15526 300 aa12.24□□□□□ -0.45
RAB1C-201ENST00000409159 SLC39A4Q6P5W5 647 aa12.24□□□□□ -0.45
RAB1C-201ENST00000409159 CXCL17Q6UXB2 119 aa12.24□□□□□ -0.45
RAB1C-201ENST00000409159 CCDC186Q7Z3E2 898 aa12.24□□□□□ -0.45
RAB1C-201ENST00000409159 PPFIBP1Q86W92 1011 aa12.24□□□□□ -0.45
RAB1C-201ENST00000409159 CREBRFQ8IUR6 639 aa12.24□□□□□ -0.45
RAB1C-201ENST00000409159 CNGA4Q8IV77 575 aa12.24□□□□□ -0.45
RAB1C-201ENST00000409159 SLC35C1Q96A29 364 aa12.24□□□□□ -0.45
RAB1C-201ENST00000409159 NLRP4Q96MN2 994 aa12.24□□□□□ -0.45
RAB1C-201ENST00000409159 GLT1D1Q96MS3 346 aa12.24□□□□□ -0.45
RAB1C-201ENST00000409159 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.24□□□□□ -0.45
RAB1C-201ENST00000409159 PTPRHQ9HD43 1115 aa12.24□□□□□ -0.45
RAB1C-201ENST00000409159 PAK6Q9NQU5 681 aaPredicted RBP12.24□□□□□ -0.45
RAB1C-201ENST00000409159 CNTNAP2Q9UHC6 1331 aa12.24□□□□□ -0.45
RAB1C-201ENST00000409159 AGO2Q9UKV8 859 aaKnown RBP12.24□□□□□ -0.45
RAB1C-201ENST00000409159 PHF24Q9UPV7 400 aa12.24□□□□□ -0.45
RAB1C-201ENST00000409159 MYH9P35579 1960 aaKnown RBP12.23□□□□□ -0.45
RAB1C-201ENST00000409159 ARID2Q68CP9 1835 aa12.23□□□□□ -0.45
RAB1C-201ENST00000409159 A0A087WZ62 844 aa12.23□□□□□ -0.45
RAB1C-201ENST00000409159 INO80B-WBP1J3KQ70 363 aa12.23□□□□□ -0.45
RAB1C-201ENST00000409159 GPR32O75388 356 aa12.23□□□□□ -0.45
RAB1C-201ENST00000409159 MCF2P10911 925 aa12.23□□□□□ -0.45
RAB1C-201ENST00000409159 CASP4P49662 377 aa12.23□□□□□ -0.45
RAB1C-201ENST00000409159 VAMP7P51809 220 aa12.23□□□□□ -0.45
RAB1C-201ENST00000409159 AP3M2P53677 418 aa12.23□□□□□ -0.45
RAB1C-201ENST00000409159 NLRP11P59045 1033 aaKnown RBP12.23□□□□□ -0.45
RAB1C-201ENST00000409159 KCNH2Q12809 1159 aa12.23□□□□□ -0.45
RAB1C-201ENST00000409159 ARID5BQ14865 1188 aa12.23□□□□□ -0.45
RAB1C-201ENST00000409159 SNRNP35Q16560 246 aaKnown RBP12.23□□□□□ -0.45
RAB1C-201ENST00000409159 MPZL3Q6UWV2 235 aa12.23□□□□□ -0.45
RAB1C-201ENST00000409159 CTU1Q7Z7A3 348 aaKnown RBP12.23□□□□□ -0.45
RAB1C-201ENST00000409159 SERINC5Q86VE9 423 aa12.23□□□□□ -0.45
RAB1C-201ENST00000409159 SLC43A3Q8NBI5 491 aa12.23□□□□□ -0.45
RAB1C-201ENST00000409159 CCDC112Q8NEF3 446 aa12.23□□□□□ -0.45
RAB1C-201ENST00000409159 NLRP7Q8WX94 980 aa12.23□□□□□ -0.45
RAB1C-201ENST00000409159 EEF2KMTQ96G04 330 aa12.23□□□□□ -0.45
RAB1C-201ENST00000409159 PANX2Q96RD6 677 aa12.23□□□□□ -0.45
RAB1C-201ENST00000409159 FDXACB1Q9BRP7 624 aaPredicted RBP12.23□□□□□ -0.45
RAB1C-201ENST00000409159 TARS2Q9BW92 718 aaKnown RBP12.23□□□□□ -0.45
RAB1C-201ENST00000409159 NUCKS1Q9H1E3 243 aaKnown RBP12.23□□□□□ -0.45
RAB1C-201ENST00000409159 PLCB1Q9NQ66 1216 aa12.23□□□□□ -0.45
RAB1C-201ENST00000409159 FBXL5Q9UKA1 691 aa12.23□□□□□ -0.45
RAB1C-201ENST00000409159 SIK3Q9Y2K2 1263 aa12.23□□□□□ -0.45
RAB1C-201ENST00000409159 USP20Q9Y2K6 914 aa12.23□□□□□ -0.45
RAB1C-201ENST00000409159 SQORQ9Y6N5 450 aa12.23□□□□□ -0.45
RAB1C-201ENST00000409159 DOCK5Q9H7D0 1870 aa12.23□□□□□ -0.45
RAB1C-201ENST00000409159 KBTBD13C9JR72 458 aa12.22□□□□□ -0.45
RAB1C-201ENST00000409159 AKR1B15C9JRZ8 316 aaPredicted RBP12.22□□□□□ -0.45
RAB1C-201ENST00000409159 M0QZ92 97 aa12.22□□□□□ -0.45
RAB1C-201ENST00000409159 DNM1LO00429 736 aa12.22□□□□□ -0.45
RAB1C-201ENST00000409159 ABLIM1O14639 778 aa12.22□□□□□ -0.45
RAB1C-201ENST00000409159 OGTO15294 1046 aa12.22□□□□□ -0.45
RAB1C-201ENST00000409159 TREHO43280 583 aa12.22□□□□□ -0.45
RAB1C-201ENST00000409159 DARSP14868 501 aaKnown RBP12.22□□□□□ -0.45
RAB1C-201ENST00000409159 EIF4BP23588 611 aaKnown RBP12.22□□□□□ -0.45
RAB1C-201ENST00000409159 IRX5P78411 483 aaPredicted RBP12.22□□□□□ -0.45
RAB1C-201ENST00000409159 CYP24A1Q07973 514 aa12.22□□□□□ -0.45
RAB1C-201ENST00000409159 PTK7Q13308 1070 aa12.22□□□□□ -0.45
RAB1C-201ENST00000409159 ITGA7Q13683 1181 aa12.22□□□□□ -0.45
RAB1C-201ENST00000409159 PSMD6Q15008 389 aa12.22□□□□□ -0.45
RAB1C-201ENST00000409159 SYCP1Q15431 976 aa12.22□□□□□ -0.45
RAB1C-201ENST00000409159 AMHR2Q16671 573 aa12.22□□□□□ -0.45
RAB1C-201ENST00000409159 SLC9C1Q4G0N8 1177 aa12.22□□□□□ -0.45
RAB1C-201ENST00000409159 ATF7IP2Q5U623 682 aa12.22□□□□□ -0.45
RAB1C-201ENST00000409159 GBP6Q6ZN66 633 aa12.22□□□□□ -0.45
RAB1C-201ENST00000409159 FMNL3Q8IVF7 1028 aa12.22□□□□□ -0.45
RAB1C-201ENST00000409159 SPC24Q8NBT2 197 aa12.22□□□□□ -0.45
RAB1C-201ENST00000409159 ZNF397Q8NF99 534 aaPredicted RBP12.22□□□□□ -0.45
RAB1C-201ENST00000409159 PARD3BQ8TEW8 1205 aa12.22□□□□□ -0.45
RAB1C-201ENST00000409159 VTI1AQ96AJ9 217 aa12.22□□□□□ -0.45
RAB1C-201ENST00000409159 MSTO1Q9BUK6 570 aa12.22□□□□□ -0.45
RAB1C-201ENST00000409159 NAA15Q9BXJ9 866 aaKnown RBP12.22□□□□□ -0.45
RAB1C-201ENST00000409159 MYO6Q9UM54 1294 aa12.22□□□□□ -0.45
RAB1C-201ENST00000409159 CAPN11Q9UMQ6 739 aa12.22□□□□□ -0.45
RAB1C-201ENST00000409159 A0A0U1RQG5 324 aaPredicted RBP12.21□□□□□ -0.45
RAB1C-201ENST00000409159 A0A1B0GUA9 196 aa12.21□□□□□ -0.45
RAB1C-201ENST00000409159 PES1O00541 588 aaKnown RBP12.21□□□□□ -0.45
RAB1C-201ENST00000409159 ERLIN2O94905 339 aa12.21□□□□□ -0.45
RAB1C-201ENST00000409159 VTNP04004 478 aa12.21□□□□□ -0.45
RAB1C-201ENST00000409159 RFX1P22670 979 aa12.21□□□□□ -0.45
RAB1C-201ENST00000409159 KCNJ6P48051 423 aa12.21□□□□□ -0.45
RAB1C-201ENST00000409159 FMO5P49326 533 aa12.21□□□□□ -0.45
RAB1C-201ENST00000409159 NOLC1Q14978 699 aaKnown RBP eCLIP12.21□□□□□ -0.45
RAB1C-201ENST00000409159 EXOC3L4Q17RC7 722 aa12.21□□□□□ -0.45
RAB1C-201ENST00000409159 DCAF4L1Q3SXM0 396 aa12.21□□□□□ -0.45
RAB1C-201ENST00000409159 FBXO46Q6PJ61 603 aaPredicted RBP12.21□□□□□ -0.45
RAB1C-201ENST00000409159 RUFY4Q6ZNE9 571 aa12.21□□□□□ -0.45
RAB1C-201ENST00000409159 LRRC8AQ8IWT6 810 aa12.21□□□□□ -0.45
RAB1C-201ENST00000409159 DNAJB3Q8WWF6 145 aa12.21□□□□□ -0.45
RAB1C-201ENST00000409159 SCLT1Q96NL6 688 aa12.21□□□□□ -0.45
RAB1C-201ENST00000409159 TSPAN18Q96SJ8 248 aa12.21□□□□□ -0.45
RAB1C-201ENST00000409159 ADPGKQ9BRR6 497 aa12.21□□□□□ -0.45
RAB1C-201ENST00000409159 CELF4Q9BZC1 486 aaKnown RBP12.21□□□□□ -0.45
RAB1C-201ENST00000409159 TTYH3Q9C0H2 523 aa12.21□□□□□ -0.45
RAB1C-201ENST00000409159 IKZF4Q9H2S9 585 aa12.21□□□□□ -0.45
RAB1C-201ENST00000409159 PCIF1Q9H4Z3 704 aa12.21□□□□□ -0.45
RAB1C-201ENST00000409159 OGDHLQ9ULD0 1010 aa12.21□□□□□ -0.45
RAB1C-201ENST00000409159 COQ4Q9Y3A0 265 aa12.21□□□□□ -0.45
RAB1C-201ENST00000409159 GRIN2DO15399 1336 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms