RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 SYNCQ9H7C4 482 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 NOD2Q9HC29 1040 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 LRRC4BQ9NT99 713 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 MARCOQ9UEW3 520 aaPredicted RBP8.93□□□□□ -0.98
SNX13-201ENST00000409076 ANAPC5Q9UJX4 755 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 CASZ1Q86V15 1759 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 PPIP5K2O43314 1243 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 ATF2P15336 505 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 LMNB1P20700 586 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 SLC12A3P55017 1021 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 JAG1P78504 1218 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 PPP3CAQ08209 521 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 PDIA5Q14554 519 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 MTERF2Q49AM1 385 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 DCAF12L1Q5VU92 463 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 PPP1R21Q6ZMI0 780 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 NETO2Q8NC67 525 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 RSRC1Q96IZ7 334 aaKnown RBP8.93□□□□□ -0.98
SNX13-201ENST00000409076 FNBP1Q96RU3 617 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 VCPKMTQ9H867 229 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 AGPAT3Q9NRZ7 376 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 WRAP73Q9P2S5 460 aaPredicted RBP8.93□□□□□ -0.98
SNX13-201ENST00000409076 PCSK1NQ9UHG2 260 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 PRR12Q9ULL5 1215 aa8.93□□□□□ -0.98
SNX13-201ENST00000409076 LRRIQ4A6NIV6 560 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 RASA4BC9J798 803 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 RASA4O43374 803 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 C21orf2O43822 256 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 MMP10P09238 476 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 SPATA31C1P0DKV0 1188 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 MARK3P27448 753 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 PDE6CP51160 858 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 NRLP54845 237 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 NEDD9Q14511 834 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 ASTE1Q2TB18 679 aaPredicted RBP8.92□□□□□ -0.98
SNX13-201ENST00000409076 GLE1Q53GS7 698 aaKnown RBP8.92□□□□□ -0.98
SNX13-201ENST00000409076 TTC27Q6P3X3 843 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 FUKQ8N0W3 1084 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 SLCO1B3Q9NPD5 702 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 C2orf71A6NGG8 1288 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 IPO5O00410 1097 aaKnown RBP8.92□□□□□ -0.98
SNX13-201ENST00000409076 MEIS2O14770 477 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 CA4P22748 312 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 ELF1P32519 619 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 HOXD13P35453 343 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 HSPA9P38646 679 aaKnown RBP8.92□□□□□ -0.98
SNX13-201ENST00000409076 GCLCP48506 637 aaPredicted RBP8.92□□□□□ -0.98
SNX13-201ENST00000409076 VAMP7P51809 220 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 ITGA8P53708 1063 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 LRRC36Q1X8D7 754 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 KCNT1Q5JUK3 1230 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 DCUN1D2Q6PH85 259 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 TMEM130Q8N3G9 435 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 CDC42EP4Q9H3Q1 356 aaKnown RBP8.92□□□□□ -0.98
SNX13-201ENST00000409076 UNC45AQ9H3U1 944 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 APEX2Q9UBZ4 518 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 AGTPBP1Q9UPW5 1226 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 PCDHGC5Q9Y5F6 944 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 NUP98P52948 1817 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 SGK1O00141 431 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 TGFB1I1O43294 461 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 RARAP10276 462 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 MSH2P43246 934 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 STAT2P52630 851 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 MTMR2Q13614 643 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 CDO1Q16878 200 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 FIGNQ5HY92 759 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 HHATQ5VTY9 493 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 LONP2Q86WA8 852 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 SPDL1Q96EA4 605 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 MKNK1Q9BUB5 465 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 WDR18Q9BV38 432 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 TMEM39BQ9GZU3 492 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 ZCWPW1Q9H0M4 648 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 METTL14Q9HCE5 456 aaKnown RBP8.92□□□□□ -0.98
SNX13-201ENST00000409076 GEMIN8Q9NWZ8 242 aaKnown RBP8.92□□□□□ -0.98
SNX13-201ENST00000409076 NXF1Q9UBU9 619 aaKnown RBP8.92□□□□□ -0.98
SNX13-201ENST00000409076 HAO1Q9UJM8 370 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 TRPC6Q9Y210 931 aa8.92□□□□□ -0.98
SNX13-201ENST00000409076 PASKQ96RG2 1323 aa8.91□□□□□ -0.98
SNX13-201ENST00000409076 SYNJ2BP-COX16A0A087WUM0 186 aa8.91□□□□□ -0.98
SNX13-201ENST00000409076 EXOC1LA0A1B0GW35 172 aa8.91□□□□□ -0.98
SNX13-201ENST00000409076 BBS9Q3SYG4 887 aa8.91□□□□□ -0.98
SNX13-201ENST00000409076 GNPTABQ3T906 1256 aa8.91□□□□□ -0.98
SNX13-201ENST00000409076 TMEM270Q6UE05 265 aa8.91□□□□□ -0.98
SNX13-201ENST00000409076 STXBP4Q6ZWJ1 553 aa8.91□□□□□ -0.98
SNX13-201ENST00000409076 IL31RAQ8NI17 732 aa8.91□□□□□ -0.98
SNX13-201ENST00000409076 TBC1D22AQ8WUA7 517 aa8.91□□□□□ -0.98
SNX13-201ENST00000409076 PRMT6Q96LA8 375 aaPredicted RBP8.91□□□□□ -0.98
SNX13-201ENST00000409076 PIH1D1Q9NWS0 290 aaKnown RBP8.91□□□□□ -0.98
SNX13-201ENST00000409076 COX16Q9P0S2 106 aa8.91□□□□□ -0.98
SNX13-201ENST00000409076 SEPT9Q9UHD8 586 aaPredicted RBP8.91□□□□□ -0.98
SNX13-201ENST00000409076 PCDHB4Q9Y5E5 795 aa8.91□□□□□ -0.98
SNX13-201ENST00000409076 MYH1P12882 1939 aa8.91□□□□□ -0.98
SNX13-201ENST00000409076 MYH4Q9Y623 1939 aa8.91□□□□□ -0.98
SNX13-201ENST00000409076 SMCHD1A6NHR9 2005 aa8.91□□□□□ -0.98
SNX13-201ENST00000409076 LRRD1A4D1F6 860 aa8.91□□□□□ -0.98
SNX13-201ENST00000409076 NFIBO00712 420 aa8.91□□□□□ -0.98
SNX13-201ENST00000409076 FGRP09769 529 aa8.91□□□□□ -0.98
SNX13-201ENST00000409076 ATXN3P54252 364 aaPredicted RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms