RNA–Protein interactions for RNA: ENST00000398792.3

CDH23-204, Transcript of cadherin related 23, humanhuman

TSL 2

Gene CDH23, Length 1,649 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-204ENST00000398792 A0A0U1RQG5 324 aaPredicted RBP18.21■□□□□ 0.51
CDH23-204ENST00000398792 PRPF4BQ13523 1007 aaKnown RBP18.21■□□□□ 0.51
CDH23-204ENST00000398792 AMHR2Q16671 573 aa18.21■□□□□ 0.51
CDH23-204ENST00000398792 ZNF710Q8N1W2 664 aa18.21■□□□□ 0.51
CDH23-204ENST00000398792 NME8Q8N427 588 aa18.21■□□□□ 0.51
CDH23-204ENST00000398792 BORCS6Q96GS4 357 aa18.21■□□□□ 0.51
CDH23-204ENST00000398792 PRIMPOLQ96LW4 560 aa18.21■□□□□ 0.51
CDH23-204ENST00000398792 ACO2Q99798 780 aaKnown RBP18.21■□□□□ 0.51
CDH23-204ENST00000398792 GCOM2Q9BZD3 368 aaPredicted RBP18.21■□□□□ 0.51
CDH23-204ENST00000398792 ANKFY1Q9P2R3 1169 aa18.21■□□□□ 0.51
CDH23-204ENST00000398792 MAPK13O15264 365 aa18.2■□□□□ 0.5
CDH23-204ENST00000398792 TEX33O43247 280 aa18.2■□□□□ 0.5
CDH23-204ENST00000398792 B4GALT5O43286 388 aa18.2■□□□□ 0.5
CDH23-204ENST00000398792 TOM1L1O75674 476 aa18.2■□□□□ 0.5
CDH23-204ENST00000398792 PTGISQ16647 500 aa18.2■□□□□ 0.5
CDH23-204ENST00000398792 VWA3BQ502W6 1294 aa18.2■□□□□ 0.5
CDH23-204ENST00000398792 SLFN12LQ6IEE8 588 aa18.2■□□□□ 0.5
CDH23-204ENST00000398792 SLC43A3Q8NBI5 491 aa18.2■□□□□ 0.5
CDH23-204ENST00000398792 ZSWIM2Q8NEG5 633 aa18.2■□□□□ 0.5
CDH23-204ENST00000398792 WNT8BQ93098 351 aa18.2■□□□□ 0.5
CDH23-204ENST00000398792 SAAL1Q96ER3 474 aa18.2■□□□□ 0.5
CDH23-204ENST00000398792 FBXL18Q96ME1 805 aa18.2■□□□□ 0.5
CDH23-204ENST00000398792 OSMRQ99650 979 aa18.2■□□□□ 0.5
CDH23-204ENST00000398792 HAPLN2Q9GZV7 340 aa18.2■□□□□ 0.5
CDH23-204ENST00000398792 GINS2Q9Y248 185 aa18.2■□□□□ 0.5
CDH23-204ENST00000398792 KIAA0391O15091 583 aaKnown RBP18.2■□□□□ 0.5
CDH23-204ENST00000398792 CSDE1O75534 798 aaKnown RBP18.2■□□□□ 0.5
CDH23-204ENST00000398792 RPLP2P05387 115 aaKnown RBP18.2■□□□□ 0.5
CDH23-204ENST00000398792 ATF7IP2Q5U623 682 aa18.2■□□□□ 0.5
CDH23-204ENST00000398792 TSHZ1Q6ZSZ6 1077 aa18.2■□□□□ 0.5
CDH23-204ENST00000398792 RPAINQ86UA6 219 aa18.2■□□□□ 0.5
CDH23-204ENST00000398792 RSPH3Q86UC2 560 aa18.2■□□□□ 0.5
CDH23-204ENST00000398792 VSTM4Q8IW00 320 aa18.2■□□□□ 0.5
CDH23-204ENST00000398792 GPD1LQ8N335 351 aa18.2■□□□□ 0.5
CDH23-204ENST00000398792 ZBTB45Q96K62 511 aaPredicted RBP18.2■□□□□ 0.5
CDH23-204ENST00000398792 NDST4Q9H3R1 872 aa18.2■□□□□ 0.5
CDH23-204ENST00000398792 CDHR5Q9HBB8 845 aa18.2■□□□□ 0.5
CDH23-204ENST00000398792 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.2■□□□□ 0.5
CDH23-204ENST00000398792 A0A0B4J269 797 aa18.19■□□□□ 0.5
CDH23-204ENST00000398792 GOLGA8IPA6NC78 632 aa18.19■□□□□ 0.5
CDH23-204ENST00000398792 GOLGA8JA6NMD2 632 aa18.19■□□□□ 0.5
CDH23-204ENST00000398792 PES1O00541 588 aaKnown RBP18.19■□□□□ 0.5
CDH23-204ENST00000398792 ABLIM1O14639 778 aa18.19■□□□□ 0.5
CDH23-204ENST00000398792 ADRB2P07550 413 aa18.19■□□□□ 0.5
CDH23-204ENST00000398792 DARSP14868 501 aaKnown RBP18.19■□□□□ 0.5
CDH23-204ENST00000398792 PROZP22891 400 aa18.19■□□□□ 0.5
CDH23-204ENST00000398792 PBX1P40424 430 aa18.19■□□□□ 0.5
CDH23-204ENST00000398792 MRPS6P82932 125 aaKnown RBP18.19■□□□□ 0.5
CDH23-204ENST00000398792 SNRNP35Q16560 246 aaKnown RBP18.19■□□□□ 0.5
CDH23-204ENST00000398792 PTPN21Q16825 1174 aa18.19■□□□□ 0.5
CDH23-204ENST00000398792 MSTO1Q9BUK6 570 aa18.19■□□□□ 0.5
CDH23-204ENST00000398792 CRISPLD2Q9H0B8 497 aa18.19■□□□□ 0.5
CDH23-204ENST00000398792 TRMT13Q9NUP7 481 aaKnown RBP18.19■□□□□ 0.5
CDH23-204ENST00000398792 BRCA2P51587 3418 aa18.18■□□□□ 0.5
CDH23-204ENST00000398792 TSPAN1O60635 241 aa18.18■□□□□ 0.5
CDH23-204ENST00000398792 ERLIN2O94905 339 aa18.18■□□□□ 0.5
CDH23-204ENST00000398792 CRYBB1P53674 252 aaPredicted RBP18.18■□□□□ 0.5
CDH23-204ENST00000398792 UBXN1Q04323 297 aa18.18■□□□□ 0.5
CDH23-204ENST00000398792 PPP2R3AQ06190 1150 aa18.18■□□□□ 0.5
CDH23-204ENST00000398792 BFSP1Q12934 665 aa18.18■□□□□ 0.5
CDH23-204ENST00000398792 PTK7Q13308 1070 aa18.18■□□□□ 0.5
CDH23-204ENST00000398792 SNX17Q15036 470 aa18.18■□□□□ 0.5
CDH23-204ENST00000398792 PCBP1Q15365 356 aaKnown RBP eCLIP18.18■□□□□ 0.5
CDH23-204ENST00000398792 DCAF17Q5H9S7 520 aaPredicted RBP18.18■□□□□ 0.5
CDH23-204ENST00000398792 MPZL3Q6UWV2 235 aa18.18■□□□□ 0.5
CDH23-204ENST00000398792 INTS8Q75QN2 995 aaKnown RBP18.18■□□□□ 0.5
CDH23-204ENST00000398792 CBWD2Q8IUF1 395 aa18.18■□□□□ 0.5
CDH23-204ENST00000398792 DRC7Q8IY82 874 aa18.18■□□□□ 0.5
CDH23-204ENST00000398792 RDH13Q8NBN7 331 aa18.18■□□□□ 0.5
CDH23-204ENST00000398792 SPC24Q8NBT2 197 aa18.18■□□□□ 0.5
CDH23-204ENST00000398792 TMEM40Q8WWA1 233 aa18.18■□□□□ 0.5
CDH23-204ENST00000398792 SLC35C1Q96A29 364 aa18.18■□□□□ 0.5
CDH23-204ENST00000398792 PTPRHQ9HD43 1115 aa18.18■□□□□ 0.5
CDH23-204ENST00000398792 AGO2Q9UKV8 859 aaKnown RBP18.18■□□□□ 0.5
CDH23-204ENST00000398792 NOD1Q9Y239 953 aa18.18■□□□□ 0.5
CDH23-204ENST00000398792 TNFSF13BQ9Y275 285 aa18.18■□□□□ 0.5
CDH23-204ENST00000398792 TRPV2Q9Y5S1 764 aa18.18■□□□□ 0.5
CDH23-204ENST00000398792 M0QZ92 97 aa18.17■□□□□ 0.5
CDH23-204ENST00000398792 ARVCFO00192 962 aa18.17■□□□□ 0.5
CDH23-204ENST00000398792 CLDN3O15551 220 aa18.17■□□□□ 0.5
CDH23-204ENST00000398792 EXTL3O43909 919 aa18.17■□□□□ 0.5
CDH23-204ENST00000398792 EIF4BP23588 611 aaKnown RBP18.17■□□□□ 0.5
CDH23-204ENST00000398792 MATR3P43243 847 aaKnown RBP eCLIP18.17■□□□□ 0.5
CDH23-204ENST00000398792 MCL1Q07820 350 aa18.17■□□□□ 0.5
CDH23-204ENST00000398792 NOLC1Q14978 699 aaKnown RBP eCLIP18.17■□□□□ 0.5
CDH23-204ENST00000398792 TMEM132AQ24JP5 1023 aa18.17■□□□□ 0.5
CDH23-204ENST00000398792 ZNF568Q3ZCX4 644 aa18.17■□□□□ 0.5
CDH23-204ENST00000398792 FKBP15Q5T1M5 1219 aa18.17■□□□□ 0.5
CDH23-204ENST00000398792 TMC6Q7Z403 805 aa18.17■□□□□ 0.5
CDH23-204ENST00000398792 U2AF1L4Q8WU68 220 aaKnown RBP18.17■□□□□ 0.5
CDH23-204ENST00000398792 DHX38Q92620 1227 aaKnown RBP18.17■□□□□ 0.5
CDH23-204ENST00000398792 SEZ6LQ9BYH1 1024 aa18.17■□□□□ 0.5
CDH23-204ENST00000398792 CELF4Q9BZC1 486 aaKnown RBP18.17■□□□□ 0.5
CDH23-204ENST00000398792 KIAA1586Q9HCI6 787 aa18.17■□□□□ 0.5
CDH23-204ENST00000398792 CDY2AQ9Y6F7 541 aa18.17■□□□□ 0.5
CDH23-204ENST00000398792 KRT13P13646 458 aa18.16■□□□□ 0.5
CDH23-204ENST00000398792 ARF4P18085 180 aaPredicted RBP18.16■□□□□ 0.5
CDH23-204ENST00000398792 FGFR4P22455 802 aa18.16■□□□□ 0.5
CDH23-204ENST00000398792 SFPQP23246 707 aaKnown RBP eCLIP18.16■□□□□ 0.5
CDH23-204ENST00000398792 MGAT3Q09327 533 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms