RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 SMIM22K7EJ46 135 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 DYNC1LI2O43237 492 aaPredicted RBP2.89□□□□□ -1.95
CHD9-202ENST00000398510 SUPT3HO75486 399 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 SDSP20132 328 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 POLR2LP62875 67 aaKnown RBP2.89□□□□□ -1.95
CHD9-202ENST00000398510 RPL10AP62906 217 aaKnown RBP2.89□□□□□ -1.95
CHD9-202ENST00000398510 IL9RQ01113 521 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 IFRD2Q12894 506 aaPredicted RBP2.89□□□□□ -1.95
CHD9-202ENST00000398510 ZNF677Q86XU0 584 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 CTAGE3PQ8IX95 158 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 DCUN1D1Q96GG9 259 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 DCTPP1Q9H773 170 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 ZSWIM4Q9H7M6 989 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 ASNSD1Q9NWL6 643 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 EURLQ9NYK6 297 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 MSRAQ9UJ68 235 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 TLK1Q9UKI8 766 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 PCDHGB4Q9UN71 923 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 CORO2BQ9UQ03 480 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 ITM2BQ9Y287 266 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 CLDN3O15551 220 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 SYNCRIPO60506 623 aaKnown RBP2.89□□□□□ -1.95
CHD9-202ENST00000398510 SNX2O60749 519 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 HOXB8P17481 243 aaPredicted RBP2.89□□□□□ -1.95
CHD9-202ENST00000398510 TNFAIP3P21580 790 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 KCNQ4P56696 695 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 CSTF3Q12996 717 aaKnown RBP2.89□□□□□ -1.95
CHD9-202ENST00000398510 PTGES3Q15185 160 aaKnown RBP2.89□□□□□ -1.95
CHD9-202ENST00000398510 CWF19L2Q2TBE0 894 aaKnown RBP2.89□□□□□ -1.95
CHD9-202ENST00000398510 ZNF438Q7Z4V0 828 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 SKAP1Q86WV1 359 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 SCFD2Q8WU76 684 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 SEPT8Q92599 483 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 IARS2Q9NSE4 1012 aaKnown RBP2.89□□□□□ -1.95
CHD9-202ENST00000398510 GCNT4Q9P109 453 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 ZBTB21Q9ULJ3 1066 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 SHANK3Q9BYB0 1731 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 PHIPQ8WWQ0 1821 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 SF3B1O75533 1304 aaKnown RBP eCLIP2.89□□□□□ -1.955e-6■■■■■ 75
CHD9-202ENST00000398510 TK2O00142 265 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 ZBED1O96006 694 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 ACADMP11310 421 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 PABPC1P11940 636 aaKnown RBP2.89□□□□□ -1.95
CHD9-202ENST00000398510 BMP3P12645 472 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 ATF2P15336 505 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 ZNF24P17028 368 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 RPS6KB1P23443 525 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 RAP1GDS1P52306 607 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 OAZ1P54368 228 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 EPHB1P54762 984 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 MAP3K7CLP57077 242 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 ITKQ08881 620 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 NFX1Q12986 1120 aaKnown RBP2.89□□□□□ -1.95
CHD9-202ENST00000398510 MTMR1Q13613 665 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 TRIP10Q15642 601 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 FAM13CQ8NE31 585 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 SLC7A14Q8TBB6 771 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 BCAS4Q8TDM0 211 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 NCLNQ969V3 563 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 L3MBTL3Q96JM7 780 aaPredicted RBP2.89□□□□□ -1.95
CHD9-202ENST00000398510 BACH2Q9BYV9 841 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 BRD8Q9H0E9 1235 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 PABPC3Q9H361 631 aaKnown RBP2.89□□□□□ -1.95
CHD9-202ENST00000398510 SMARCAD1Q9H4L7 1026 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 ENTPD7Q9NQZ7 604 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 ERAP1Q9NZ08 941 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 PCDHGB3Q9Y5G1 929 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 MBD5Q9P267 1494 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 ATXN2Q99700 1313 aaKnown RBP2.89□□□□□ -1.95
CHD9-202ENST00000398510 CRYBG1Q9Y4K1 1723 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 K7ERI5 159 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 CTNND1O60716 968 aaKnown RBP2.89□□□□□ -1.95
CHD9-202ENST00000398510 MX2P20592 715 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 GUCY2CP25092 1073 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 USP11P51784 963 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 PDX1P52945 283 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 FKBP3Q00688 224 aaKnown RBP2.89□□□□□ -1.95
CHD9-202ENST00000398510 ITGADQ13349 1161 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 TP53BP2Q13625 1128 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 COG2Q14746 738 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 HHATQ5VTY9 493 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 HHIPL2Q6UWX4 724 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 STRADAQ7RTN6 431 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 TRMT11Q7Z4G4 463 aaKnown RBP2.89□□□□□ -1.95
CHD9-202ENST00000398510 CCDC185Q8N715 623 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 ARMC2Q8NEN0 867 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 ABHD8Q96I13 439 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 CCDC85AQ96PX6 553 aaPredicted RBP2.89□□□□□ -1.95
CHD9-202ENST00000398510 CRAMP1Q96RY5 1269 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 MAP3K14Q99558 947 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 CEP44Q9C0F1 390 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 KIF17Q9P2E2 1029 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 PRG3Q9Y2Y8 225 aaPredicted RBP2.89□□□□□ -1.95
CHD9-202ENST00000398510 LRP6O75581 1613 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 CCDC160A6NGH7 325 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 MANSC4A6NHS7 340 aaPredicted RBP2.89□□□□□ -1.95
CHD9-202ENST00000398510 GUCY1B2O75343 617 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 CPP00450 1065 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 PHKG2P15735 406 aa2.89□□□□□ -1.95
CHD9-202ENST00000398510 RAG1P15918 1043 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms