RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 IPPQ9Y573 584 aa27.9■■■□□ 2.06
TSPAN4-207ENST00000397411 LAMA2P24043 3122 aaKnown RBP27.89■■■□□ 2.06
TSPAN4-207ENST00000397411 TRAK2O60296 914 aa27.89■■■□□ 2.06
TSPAN4-207ENST00000397411 RB1P06400 928 aa27.89■■■□□ 2.06
TSPAN4-207ENST00000397411 IDEP14735 1019 aa27.89■■■□□ 2.06
TSPAN4-207ENST00000397411 GPM6BQ13491 265 aa27.89■■■□□ 2.06
TSPAN4-207ENST00000397411 ATF7IP2Q5U623 682 aa27.89■■■□□ 2.06
TSPAN4-207ENST00000397411 URGCPQ8TCY9 931 aa27.89■■■□□ 2.06
TSPAN4-207ENST00000397411 MRPL9Q9BYD2 267 aaKnown RBP27.89■■■□□ 2.06
TSPAN4-207ENST00000397411 RSAD1Q9HA92 442 aa27.89■■■□□ 2.06
TSPAN4-207ENST00000397411 GDPD2Q9HCC8 539 aa27.89■■■□□ 2.06
TSPAN4-207ENST00000397411 STXBP5LQ9Y2K9 1186 aa27.89■■■□□ 2.06
TSPAN4-207ENST00000397411 PCDHB12Q9Y5F1 795 aa27.89■■■□□ 2.06
TSPAN4-207ENST00000397411 EPOPA6NHQ4 379 aa27.88■■■□□ 2.05
TSPAN4-207ENST00000397411 TTLL13PA6NNM8 815 aa27.88■■■□□ 2.05
TSPAN4-207ENST00000397411 CMA1P23946 247 aa27.88■■■□□ 2.05
TSPAN4-207ENST00000397411 RNASELQ05823 741 aaKnown RBP27.88■■■□□ 2.05
TSPAN4-207ENST00000397411 NOMO2Q5JPE7 1267 aa27.88■■■□□ 2.05
TSPAN4-207ENST00000397411 NT5DC1Q5TFE4 455 aa27.88■■■□□ 2.05
TSPAN4-207ENST00000397411 HAUS6Q7Z4H7 955 aa27.88■■■□□ 2.05
TSPAN4-207ENST00000397411 FAM178BQ8IXR5 827 aa27.88■■■□□ 2.05
TSPAN4-207ENST00000397411 CEP57L1Q8IYX8 460 aa27.88■■■□□ 2.05
TSPAN4-207ENST00000397411 LRRC43Q8N309 656 aa27.88■■■□□ 2.05
TSPAN4-207ENST00000397411 SMG8Q8ND04 991 aaKnown RBP27.88■■■□□ 2.05
TSPAN4-207ENST00000397411 GDPD5Q8WTR4 605 aa27.88■■■□□ 2.05
TSPAN4-207ENST00000397411 RSPH1Q8WYR4 309 aa27.88■■■□□ 2.05
TSPAN4-207ENST00000397411 STAMQ92783 540 aa27.88■■■□□ 2.05
TSPAN4-207ENST00000397411 CLP1Q92989 425 aaKnown RBP27.88■■■□□ 2.05
TSPAN4-207ENST00000397411 TCHPQ9BT92 498 aa27.88■■■□□ 2.05
TSPAN4-207ENST00000397411 TNMDQ9H2S6 317 aa27.88■■■□□ 2.05
TSPAN4-207ENST00000397411 PDZD7Q9H5P4 517 aa27.88■■■□□ 2.05
TSPAN4-207ENST00000397411 PARP2Q9UGN5 583 aa27.88■■■□□ 2.05
TSPAN4-207ENST00000397411 HES2Q9Y543 173 aa27.88■■■□□ 2.05
TSPAN4-207ENST00000397411 GOLGA6L4A6NEF3 574 aa27.87■■■□□ 2.05
TSPAN4-207ENST00000397411 K7ENM7 598 aa27.87■■■□□ 2.05
TSPAN4-207ENST00000397411 GAP43P17677 238 aa27.87■■■□□ 2.05
TSPAN4-207ENST00000397411 ZNF131P52739 623 aa27.87■■■□□ 2.05
TSPAN4-207ENST00000397411 AGMOQ6ZNB7 445 aa27.87■■■□□ 2.05
TSPAN4-207ENST00000397411 TMEM161BQ8NDZ6 487 aa27.87■■■□□ 2.05
TSPAN4-207ENST00000397411 BICD1Q96G01 975 aa27.87■■■□□ 2.05
TSPAN4-207ENST00000397411 C11orf84Q9BUA3 381 aaPredicted RBP27.87■■■□□ 2.05
TSPAN4-207ENST00000397411 COL4A6Q14031 1691 aa27.87■■■□□ 2.05
TSPAN4-207ENST00000397411 RALGAPA2Q2PPJ7 1873 aa27.87■■■□□ 2.05
TSPAN4-207ENST00000397411 A0A1B0GVL5 298 aa27.86■■■□□ 2.05
TSPAN4-207ENST00000397411 MEIS3P2A8K0S8 358 aa27.86■■■□□ 2.05
TSPAN4-207ENST00000397411 OFD1O75665 1012 aa27.86■■■□□ 2.05
TSPAN4-207ENST00000397411 MAPTP10636 758 aaKnown RBP27.86■■■□□ 2.05
TSPAN4-207ENST00000397411 SCP2P22307 547 aa27.86■■■□□ 2.05
TSPAN4-207ENST00000397411 NCKAP1LP55160 1127 aa27.86■■■□□ 2.05
TSPAN4-207ENST00000397411 E2F4Q16254 413 aa27.86■■■□□ 2.05
TSPAN4-207ENST00000397411 SLC17A8Q8NDX2 589 aa27.86■■■□□ 2.05
TSPAN4-207ENST00000397411 ACO2Q99798 780 aaKnown RBP27.86■■■□□ 2.05
TSPAN4-207ENST00000397411 TARS2Q9BW92 718 aaKnown RBP27.86■■■□□ 2.05
TSPAN4-207ENST00000397411 PLVAPQ9BX97 442 aa27.86■■■□□ 2.05
TSPAN4-207ENST00000397411 MAGEF1Q9HAY2 307 aa27.86■■■□□ 2.05
TSPAN4-207ENST00000397411 KANSL3Q9P2N6 904 aa27.86■■■□□ 2.05
TSPAN4-207ENST00000397411 TNFSF13BQ9Y275 285 aa27.86■■■□□ 2.05
TSPAN4-207ENST00000397411 EDN1P05305 212 aa27.85■■■□□ 2.05
TSPAN4-207ENST00000397411 LAG3P18627 525 aa27.85■■■□□ 2.05
TSPAN4-207ENST00000397411 ABCD1P33897 745 aa27.85■■■□□ 2.05
TSPAN4-207ENST00000397411 MATR3P43243 847 aaKnown RBP eCLIP27.85■■■□□ 2.05
TSPAN4-207ENST00000397411 ADGRE1Q14246 886 aa27.85■■■□□ 2.05
TSPAN4-207ENST00000397411 DCAF4L1Q3SXM0 396 aa27.85■■■□□ 2.05
TSPAN4-207ENST00000397411 HERC4Q5GLZ8 1057 aaPredicted RBP27.85■■■□□ 2.05
TSPAN4-207ENST00000397411 EEF1DP3Q658K8 133 aa27.85■■■□□ 2.05
TSPAN4-207ENST00000397411 CCDC65Q8IXS2 484 aa27.85■■■□□ 2.05
TSPAN4-207ENST00000397411 MICALL1Q8N3F8 863 aa27.85■■■□□ 2.05
TSPAN4-207ENST00000397411 FAM193BQ96PV7 902 aaPredicted RBP27.85■■■□□ 2.05
TSPAN4-207ENST00000397411 RNF39Q9H2S5 420 aa27.85■■■□□ 2.05
TSPAN4-207ENST00000397411 NXF3Q9H4D5 531 aaKnown RBP27.85■■■□□ 2.05
TSPAN4-207ENST00000397411 PANK4Q9NVE7 773 aa27.85■■■□□ 2.05
TSPAN4-207ENST00000397411 CHMP5Q9NZZ3 219 aa27.85■■■□□ 2.05
TSPAN4-207ENST00000397411 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.84■■■□□ 2.05
TSPAN4-207ENST00000397411 H3BNC9 293 aa27.84■■■□□ 2.05
TSPAN4-207ENST00000397411 PFKFB1P16118 471 aa27.84■■■□□ 2.05
TSPAN4-207ENST00000397411 AKAP5P24588 427 aa27.84■■■□□ 2.05
TSPAN4-207ENST00000397411 NMT1P30419 496 aaKnown RBP27.84■■■□□ 2.05
TSPAN4-207ENST00000397411 PTPROQ16827 1216 aa27.84■■■□□ 2.05
TSPAN4-207ENST00000397411 LRRC55Q6ZSA7 311 aa27.84■■■□□ 2.05
TSPAN4-207ENST00000397411 TAS1R3Q7RTX0 852 aa27.84■■■□□ 2.05
TSPAN4-207ENST00000397411 ZBTB33Q86T24 672 aa27.84■■■□□ 2.05
TSPAN4-207ENST00000397411 SFR1Q86XK3 245 aa27.84■■■□□ 2.05
TSPAN4-207ENST00000397411 DNAJC19Q96DA6 116 aa27.84■■■□□ 2.05
TSPAN4-207ENST00000397411 CWH43Q9H720 699 aa27.84■■■□□ 2.05
TSPAN4-207ENST00000397411 MRPL44Q9H9J2 332 aaKnown RBP27.84■■■□□ 2.05
TSPAN4-207ENST00000397411 KBTBD4Q9NVX7 518 aa27.84■■■□□ 2.05
TSPAN4-207ENST00000397411 SEL1LQ9UBV2 794 aa27.84■■■□□ 2.05
TSPAN4-207ENST00000397411 GIT1Q9Y2X7 761 aa27.84■■■□□ 2.05
TSPAN4-207ENST00000397411 CSPP1Q1MSJ5 1256 aa27.83■■■□□ 2.05
TSPAN4-207ENST00000397411 ZNF568Q3ZCX4 644 aa27.83■■■□□ 2.05
TSPAN4-207ENST00000397411 THNSL1Q8IYQ7 743 aa27.83■■■□□ 2.05
TSPAN4-207ENST00000397411 FSIP1Q8NA03 581 aa27.83■■■□□ 2.05
TSPAN4-207ENST00000397411 COLGALT1Q8NBJ5 622 aa27.83■■■□□ 2.05
TSPAN4-207ENST00000397411 PPM1EQ8WY54 764 aa27.83■■■□□ 2.05
TSPAN4-207ENST00000397411 ZNF558Q96NG5 402 aa27.83■■■□□ 2.05
TSPAN4-207ENST00000397411 GAD1Q99259 594 aa27.83■■■□□ 2.05
TSPAN4-207ENST00000397411 GBP3Q9H0R5 595 aa27.83■■■□□ 2.05
TSPAN4-207ENST00000397411 TBC1D7Q9P0N9 293 aa27.83■■■□□ 2.05
TSPAN4-207ENST00000397411 HCSTQ9UBK5 93 aa27.83■■■□□ 2.05
TSPAN4-207ENST00000397411 SERTAD1Q9UHV2 236 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms