RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 ZSWIM2Q8NEG5 633 aa16.38■□□□□ 0.21
MCF2L-205ENST00000397017 FAM167AQ96KS9 214 aa16.38■□□□□ 0.21
MCF2L-205ENST00000397017 JPH2Q9BR39 696 aaPredicted RBP16.38■□□□□ 0.21
MCF2L-205ENST00000397017 TAF1DQ9H5J8 278 aaPredicted RBP16.38■□□□□ 0.21
MCF2L-205ENST00000397017 C10orf71Q711Q0 1435 aa16.38■□□□□ 0.21
MCF2L-205ENST00000397017 EIF3DO15371 548 aaKnown RBP eCLIP16.38■□□□□ 0.21
MCF2L-205ENST00000397017 NLRP11P59045 1033 aaKnown RBP16.38■□□□□ 0.21
MCF2L-205ENST00000397017 SLC18A3Q16572 532 aa16.38■□□□□ 0.21
MCF2L-205ENST00000397017 KIZQ2M2Z5 673 aa16.38■□□□□ 0.21
MCF2L-205ENST00000397017 WDR72Q3MJ13 1102 aa16.38■□□□□ 0.21
MCF2L-205ENST00000397017 CPA5Q8WXQ8 436 aa16.38■□□□□ 0.21
MCF2L-205ENST00000397017 EPB41L5Q9HCM4 733 aa16.38■□□□□ 0.21
MCF2L-205ENST00000397017 ASIC3Q9UHC3 531 aa16.38■□□□□ 0.21
MCF2L-205ENST00000397017 LAMA4Q16363 1823 aa16.37■□□□□ 0.21
MCF2L-205ENST00000397017 CXCL11O14625 94 aa16.37■□□□□ 0.21
MCF2L-205ENST00000397017 MAPK4P31152 587 aa16.37■□□□□ 0.21
MCF2L-205ENST00000397017 KCNMA1Q12791 1236 aa16.37■□□□□ 0.21
MCF2L-205ENST00000397017 SEMA3FQ13275 785 aa16.37■□□□□ 0.21
MCF2L-205ENST00000397017 SLFN12LQ6IEE8 588 aa16.37■□□□□ 0.21
MCF2L-205ENST00000397017 FMNL3Q8IVF7 1028 aa16.37■□□□□ 0.21
MCF2L-205ENST00000397017 SYCE1Q8N0S2 351 aa16.37■□□□□ 0.21
MCF2L-205ENST00000397017 ZNF507Q8TCN5 953 aa16.37■□□□□ 0.21
MCF2L-205ENST00000397017 RABGGTAQ92696 567 aa16.37■□□□□ 0.21
MCF2L-205ENST00000397017 DNAJC7Q99615 494 aa16.37■□□□□ 0.21
MCF2L-205ENST00000397017 MRPL4Q9BYD3 311 aaKnown RBP16.37■□□□□ 0.21
MCF2L-205ENST00000397017 MRFAP1Q9Y605 127 aa16.37■□□□□ 0.21
MCF2L-205ENST00000397017 ASTN1O14525 1302 aa16.37■□□□□ 0.21
MCF2L-205ENST00000397017 TGFB1I1O43294 461 aa16.37■□□□□ 0.21
MCF2L-205ENST00000397017 NEFHP12036 1026 aa16.37■□□□□ 0.21
MCF2L-205ENST00000397017 GUCY2CP25092 1073 aa16.37■□□□□ 0.21
MCF2L-205ENST00000397017 CYP2C19P33261 490 aa16.37■□□□□ 0.21
MCF2L-205ENST00000397017 ARMCX2Q7L311 632 aa16.37■□□□□ 0.21
MCF2L-205ENST00000397017 HDXQ7Z353 690 aa16.37■□□□□ 0.21
MCF2L-205ENST00000397017 COG1Q8WTW3 980 aa16.37■□□□□ 0.21
MCF2L-205ENST00000397017 RAB20Q9NX57 234 aa16.37■□□□□ 0.21
MCF2L-205ENST00000397017 FRMPD4Q14CM0 1322 aa16.37■□□□□ 0.21
MCF2L-205ENST00000397017 SPIRE1Q08AE8 756 aa16.37■□□□□ 0.21
MCF2L-205ENST00000397017 GLRA4Q5JXX5 417 aa16.37■□□□□ 0.21
MCF2L-205ENST00000397017 WDR59Q6PJI9 974 aa16.37■□□□□ 0.21
MCF2L-205ENST00000397017 LEKR1Q6ZMV7 388 aa16.37■□□□□ 0.21
MCF2L-205ENST00000397017 USP50Q70EL3 339 aaPredicted RBP16.37■□□□□ 0.21
MCF2L-205ENST00000397017 SMARCAD1Q9H4L7 1026 aa16.37■□□□□ 0.21
MCF2L-205ENST00000397017 KCND2Q9NZV8 630 aa16.37■□□□□ 0.21
MCF2L-205ENST00000397017 RCCD1A6NED2 376 aa16.36■□□□□ 0.21
MCF2L-205ENST00000397017 GLTPD2A6NH11 291 aa16.36■□□□□ 0.21
MCF2L-205ENST00000397017 ZNF862O60290 1169 aa16.36■□□□□ 0.21
MCF2L-205ENST00000397017 GYS2P54840 703 aa16.36■□□□□ 0.21
MCF2L-205ENST00000397017 TRIP13Q15645 432 aaPredicted RBP16.36■□□□□ 0.21
MCF2L-205ENST00000397017 TCP11Q8WWU5 503 aa16.36■□□□□ 0.21
MCF2L-205ENST00000397017 HEMGNQ9BXL5 484 aa16.36■□□□□ 0.21
MCF2L-205ENST00000397017 NMRK2Q9NPI5 230 aa16.36■□□□□ 0.21
MCF2L-205ENST00000397017 CNOT8Q9UFF9 292 aaKnown RBP16.36■□□□□ 0.21
MCF2L-205ENST00000397017 MTUS1Q9ULD2 1270 aa16.36■□□□□ 0.21
MCF2L-205ENST00000397017 HPDP32754 393 aaPredicted RBP16.36■□□□□ 0.21
MCF2L-205ENST00000397017 CAPN12Q6ZSI9 719 aa16.36■□□□□ 0.21
MCF2L-205ENST00000397017 OSBPL9Q96SU4 736 aa16.36■□□□□ 0.21
MCF2L-205ENST00000397017 PARK7Q99497 189 aaKnown RBP16.36■□□□□ 0.21
MCF2L-205ENST00000397017 KCTD10Q9H3F6 313 aa16.36■□□□□ 0.21
MCF2L-205ENST00000397017 ABCB6Q9NP58 842 aa16.36■□□□□ 0.21
MCF2L-205ENST00000397017 IGSF9BQ9UPX0 1349 aa16.36■□□□□ 0.21
MCF2L-205ENST00000397017 MYH1P12882 1939 aa16.36■□□□□ 0.21
MCF2L-205ENST00000397017 HEXIM1O94992 359 aaKnown RBP16.36■□□□□ 0.21
MCF2L-205ENST00000397017 CFAP58Q5T655 872 aa16.36■□□□□ 0.21
MCF2L-205ENST00000397017 TWF2Q6IBS0 349 aaKnown RBP16.36■□□□□ 0.21
MCF2L-205ENST00000397017 LBX2Q6XYB7 198 aa16.36■□□□□ 0.21
MCF2L-205ENST00000397017 ZNF571Q7Z3V5 609 aaPredicted RBP16.36■□□□□ 0.21
MCF2L-205ENST00000397017 SLC20A1Q8WUM9 679 aa16.36■□□□□ 0.21
MCF2L-205ENST00000397017 ANAPC7Q9UJX3 599 aa16.36■□□□□ 0.21
MCF2L-205ENST00000397017 SYNPO2Q9UMS6 1093 aa16.36■□□□□ 0.21
MCF2L-205ENST00000397017 FGGP02679 453 aa16.35■□□□□ 0.21
MCF2L-205ENST00000397017 GTF2A2P52657 109 aa16.35■□□□□ 0.21
MCF2L-205ENST00000397017 DYNLT1P63172 113 aa16.35■□□□□ 0.21
MCF2L-205ENST00000397017 ZNF699Q32M78 642 aa16.35■□□□□ 0.21
MCF2L-205ENST00000397017 XRRA1Q6P2D8 792 aa16.35■□□□□ 0.21
MCF2L-205ENST00000397017 TATDN2Q93075 761 aa16.35■□□□□ 0.21
MCF2L-205ENST00000397017 HEXIM2Q96MH2 286 aaKnown RBP16.35■□□□□ 0.21
MCF2L-205ENST00000397017 DDX47Q9H0S4 455 aaKnown RBP16.35■□□□□ 0.21
MCF2L-205ENST00000397017 TXNRD2Q9NNW7 524 aa16.35■□□□□ 0.21
MCF2L-205ENST00000397017 TRAF3IP3Q9Y228 551 aa16.35■□□□□ 0.21
MCF2L-205ENST00000397017 LRP5O75197 1615 aa16.35■□□□□ 0.21
MCF2L-205ENST00000397017 MYH6P13533 1939 aa16.35■□□□□ 0.21
MCF2L-205ENST00000397017 CHD4Q14839 1912 aa16.35■□□□□ 0.21
MCF2L-205ENST00000397017 SLC16A3O15427 465 aaKnown RBP16.35■□□□□ 0.21
MCF2L-205ENST00000397017 ZEB2O60315 1214 aa16.35■□□□□ 0.21
MCF2L-205ENST00000397017 HLA-DRAP01903 254 aa16.35■□□□□ 0.21
MCF2L-205ENST00000397017 INSRRP14616 1297 aa16.35■□□□□ 0.21
MCF2L-205ENST00000397017 RDXP35241 583 aaKnown RBP16.35■□□□□ 0.21
MCF2L-205ENST00000397017 PPP3CAQ08209 521 aa16.35■□□□□ 0.21
MCF2L-205ENST00000397017 HAUS1Q96CS2 278 aa16.35■□□□□ 0.21
MCF2L-205ENST00000397017 DNAJC17Q9NVM6 304 aaKnown RBP16.35■□□□□ 0.21
MCF2L-205ENST00000397017 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.35■□□□□ 0.21
MCF2L-205ENST00000397017 EDIL3O43854 480 aa16.35■□□□□ 0.21
MCF2L-205ENST00000397017 GH1P01241 217 aa16.35■□□□□ 0.21
MCF2L-205ENST00000397017 COPB2P35606 906 aa16.35■□□□□ 0.21
MCF2L-205ENST00000397017 PHKA2P46019 1235 aa16.35■□□□□ 0.21
MCF2L-205ENST00000397017 METTL7BQ6UX53 244 aa16.35■□□□□ 0.21
MCF2L-205ENST00000397017 CCDC26Q8TAB7 109 aa16.35■□□□□ 0.21
MCF2L-205ENST00000397017 CPB2Q96IY4 423 aa16.35■□□□□ 0.21
MCF2L-205ENST00000397017 BTBD6Q96KE9 485 aa16.35■□□□□ 0.21
MCF2L-205ENST00000397017 STK33Q9BYT3 514 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms