RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 A0A0U1RQF3 1178 aa18.02■□□□□ 0.48
AP1S3-202ENST00000396653 MYBP10242 640 aa18.02■□□□□ 0.48
AP1S3-202ENST00000396653 PROZP22891 400 aa18.02■□□□□ 0.48
AP1S3-202ENST00000396653 CASP5P51878 434 aa18.02■□□□□ 0.48
AP1S3-202ENST00000396653 FAM189BP81408 668 aa18.02■□□□□ 0.48
AP1S3-202ENST00000396653 BMT2Q1RMZ1 405 aa18.02■□□□□ 0.48
AP1S3-202ENST00000396653 DCAF4L1Q3SXM0 396 aa18.02■□□□□ 0.48
AP1S3-202ENST00000396653 ZC2HC1CQ53FD0 456 aaPredicted RBP18.02■□□□□ 0.48
AP1S3-202ENST00000396653 SLC27A1Q6PCB7 646 aa18.02■□□□□ 0.48
AP1S3-202ENST00000396653 KIAA0895Q8NCT3 520 aa18.02■□□□□ 0.48
AP1S3-202ENST00000396653 ZNF507Q8TCN5 953 aa18.02■□□□□ 0.48
AP1S3-202ENST00000396653 HPS3Q969F9 1004 aa18.02■□□□□ 0.48
AP1S3-202ENST00000396653 ACCSQ96QU6 501 aa18.02■□□□□ 0.48
AP1S3-202ENST00000396653 ADPGKQ9BRR6 497 aa18.02■□□□□ 0.48
AP1S3-202ENST00000396653 PDZD7Q9H5P4 517 aa18.02■□□□□ 0.48
AP1S3-202ENST00000396653 TMEM206Q9H813 350 aa18.02■□□□□ 0.48
AP1S3-202ENST00000396653 FAM105AQ9NUU6 356 aa18.02■□□□□ 0.48
AP1S3-202ENST00000396653 CXXC1Q9P0U4 656 aaPredicted RBP18.02■□□□□ 0.48
AP1S3-202ENST00000396653 SLC4A7Q9Y6M7 1214 aa18.02■□□□□ 0.48
AP1S3-202ENST00000396653 COL4A6Q14031 1691 aa18.02■□□□□ 0.47
AP1S3-202ENST00000396653 RALGAPA2Q2PPJ7 1873 aa18.01■□□□□ 0.47
AP1S3-202ENST00000396653 TTLL13PA6NNM8 815 aa18.01■□□□□ 0.47
AP1S3-202ENST00000396653 ZNF623O75123 536 aa18.01■□□□□ 0.47
AP1S3-202ENST00000396653 TOM1L1O75674 476 aa18.01■□□□□ 0.47
AP1S3-202ENST00000396653 TMEM132AQ24JP5 1023 aa18.01■□□□□ 0.47
AP1S3-202ENST00000396653 UBXN11Q5T124 520 aa18.01■□□□□ 0.47
AP1S3-202ENST00000396653 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.01■□□□□ 0.47
AP1S3-202ENST00000396653 NPAS4Q8IUM7 802 aa18.01■□□□□ 0.47
AP1S3-202ENST00000396653 BICD1Q96G01 975 aa18.01■□□□□ 0.47
AP1S3-202ENST00000396653 TARS2Q9BW92 718 aaKnown RBP18.01■□□□□ 0.47
AP1S3-202ENST00000396653 PTPRHQ9HD43 1115 aa18.01■□□□□ 0.47
AP1S3-202ENST00000396653 SLC39A2Q9NP94 309 aa18.01■□□□□ 0.47
AP1S3-202ENST00000396653 FNDC1Q4ZHG4 1894 aaPredicted RBP18.01■□□□□ 0.47
AP1S3-202ENST00000396653 CITO14578 2027 aa18■□□□□ 0.47
AP1S3-202ENST00000396653 ABLIM1O14639 778 aa18■□□□□ 0.47
AP1S3-202ENST00000396653 HNRNPDLO14979 420 aaKnown RBP18■□□□□ 0.47
AP1S3-202ENST00000396653 PRPF6O94906 941 aaKnown RBP18■□□□□ 0.47
AP1S3-202ENST00000396653 KIF20AO95235 890 aa18■□□□□ 0.47
AP1S3-202ENST00000396653 EOMESO95936 686 aa18■□□□□ 0.47
AP1S3-202ENST00000396653 STAG3L1P0CL83 205 aa18■□□□□ 0.47
AP1S3-202ENST00000396653 LIG4P49917 911 aa18■□□□□ 0.47
AP1S3-202ENST00000396653 DEFB103AP81534 67 aa18■□□□□ 0.47
AP1S3-202ENST00000396653 STK4Q13043 487 aa18■□□□□ 0.47
AP1S3-202ENST00000396653 COBLL1Q53SF7 1204 aa18■□□□□ 0.47
AP1S3-202ENST00000396653 MPZL3Q6UWV2 235 aa18■□□□□ 0.47
AP1S3-202ENST00000396653 ECHDC2Q86YB7 292 aa18■□□□□ 0.47
AP1S3-202ENST00000396653 MYOCDQ8IZQ8 938 aa18■□□□□ 0.47
AP1S3-202ENST00000396653 CRIPAKQ8N1N5 446 aa18■□□□□ 0.47
AP1S3-202ENST00000396653 TRIML1Q8N9V2 468 aa18■□□□□ 0.47
AP1S3-202ENST00000396653 GLIS3Q8NEA6 775 aa18■□□□□ 0.47
AP1S3-202ENST00000396653 SCFD1Q8WVM8 642 aa18■□□□□ 0.47
AP1S3-202ENST00000396653 RSPH1Q8WYR4 309 aa18■□□□□ 0.47
AP1S3-202ENST00000396653 TOP1MTQ969P6 601 aa18■□□□□ 0.47
AP1S3-202ENST00000396653 TMEM161AQ9NX61 479 aa18■□□□□ 0.47
AP1S3-202ENST00000396653 KIAA1468Q9P260 1216 aa18■□□□□ 0.47
AP1S3-202ENST00000396653 ZMYM2Q9UBW7 1377 aa18■□□□□ 0.47
AP1S3-202ENST00000396653 RBAK-RBAKDNI3L0D1 243 aa17.99■□□□□ 0.47
AP1S3-202ENST00000396653 MCF2P10911 925 aa17.99■□□□□ 0.47
AP1S3-202ENST00000396653 SNRPFP62306 86 aaKnown RBP17.99■□□□□ 0.47
AP1S3-202ENST00000396653 CAMK4Q16566 473 aa17.99■□□□□ 0.47
AP1S3-202ENST00000396653 ZNF568Q3ZCX4 644 aa17.99■□□□□ 0.47
AP1S3-202ENST00000396653 ZNF658Q5TYW1 1059 aaPredicted RBP17.99■□□□□ 0.47
AP1S3-202ENST00000396653 EEF1DP3Q658K8 133 aa17.99■□□□□ 0.47
AP1S3-202ENST00000396653 MRPL10Q7Z7H8 261 aaKnown RBP17.99■□□□□ 0.47
AP1S3-202ENST00000396653 ZNF598Q86UK7 904 aaKnown RBP17.99■□□□□ 0.47
AP1S3-202ENST00000396653 HACE1Q8IYU2 909 aa17.99■□□□□ 0.47
AP1S3-202ENST00000396653 EIF2AQ9BY44 585 aaKnown RBP17.99■□□□□ 0.47
AP1S3-202ENST00000396653 TRIM6Q9C030 488 aaPredicted RBP17.99■□□□□ 0.47
AP1S3-202ENST00000396653 MAN1B1Q9UKM7 699 aa17.99■□□□□ 0.47
AP1S3-202ENST00000396653 PCDHB2Q9Y5E7 798 aa17.99■□□□□ 0.47
AP1S3-202ENST00000396653 STYXL1Q9Y6J8 313 aa17.99■□□□□ 0.47
AP1S3-202ENST00000396653 HOXA2O43364 376 aa17.98■□□□□ 0.47
AP1S3-202ENST00000396653 NPTXRO95502 500 aa17.98■□□□□ 0.47
AP1S3-202ENST00000396653 ATP2A2P16615 1042 aaKnown RBP17.98■□□□□ 0.47
AP1S3-202ENST00000396653 ATF7P17544 494 aaPredicted RBP17.98■□□□□ 0.47
AP1S3-202ENST00000396653 MCL1Q07820 350 aa17.98■□□□□ 0.47
AP1S3-202ENST00000396653 KCNA1Q09470 495 aa17.98■□□□□ 0.47
AP1S3-202ENST00000396653 NOLC1Q14978 699 aaKnown RBP eCLIP17.98■□□□□ 0.47
AP1S3-202ENST00000396653 SLFN12LQ6IEE8 588 aa17.98■□□□□ 0.47
AP1S3-202ENST00000396653 SLC39A4Q6P5W5 647 aa17.98■□□□□ 0.47
AP1S3-202ENST00000396653 CDR2LQ86X02 465 aaPredicted RBP17.98■□□□□ 0.47
AP1S3-202ENST00000396653 SYCP3Q8IZU3 236 aa17.98■□□□□ 0.47
AP1S3-202ENST00000396653 GUF1Q8N442 669 aaKnown RBP17.98■□□□□ 0.47
AP1S3-202ENST00000396653 ERCC4Q92889 916 aaPredicted RBP17.98■□□□□ 0.47
AP1S3-202ENST00000396653 PGBD4Q96DM1 585 aa17.98■□□□□ 0.47
AP1S3-202ENST00000396653 CDT1Q9H211 546 aa17.98■□□□□ 0.47
AP1S3-202ENST00000396653 CGNQ9P2M7 1197 aaKnown RBP17.98■□□□□ 0.47
AP1S3-202ENST00000396653 LRFN2Q9ULH4 789 aa17.98■□□□□ 0.47
AP1S3-202ENST00000396653 USP20Q9Y2K6 914 aa17.98■□□□□ 0.47
AP1S3-202ENST00000396653 IPPQ9Y573 584 aa17.98■□□□□ 0.47
AP1S3-202ENST00000396653 PCDHB7Q9Y5E2 793 aa17.98■□□□□ 0.47
AP1S3-202ENST00000396653 PDCD11Q14690 1871 aaKnown RBP17.98■□□□□ 0.47
AP1S3-202ENST00000396653 CLDN3O15551 220 aa17.97■□□□□ 0.47
AP1S3-202ENST00000396653 GJB5O95377 273 aa17.97■□□□□ 0.47
AP1S3-202ENST00000396653 HOXD13P35453 343 aa17.97■□□□□ 0.47
AP1S3-202ENST00000396653 PPP1R2P41236 205 aa17.97■□□□□ 0.47
AP1S3-202ENST00000396653 KYAT1Q16773 422 aa17.97■□□□□ 0.47
AP1S3-202ENST00000396653 KNOP1Q1ED39 458 aaKnown RBP17.97■□□□□ 0.47
AP1S3-202ENST00000396653 KLHL40Q2TBA0 621 aa17.97■□□□□ 0.47
AP1S3-202ENST00000396653 CCDC183Q5T5S1 534 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms