RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 AFF1P51825 1210 aaKnown RBP19.48■□□□□ 0.71
SNRPA1-202ENST00000394082 EARS2Q5JPH6 523 aaKnown RBP19.48■□□□□ 0.71
SNRPA1-202ENST00000394082 GPR65Q8IYL9 337 aa19.48■□□□□ 0.71
SNRPA1-202ENST00000394082 RNF168Q8IYW5 571 aaPredicted RBP19.48■□□□□ 0.71
SNRPA1-202ENST00000394082 C12orf76Q8N812 135 aaPredicted RBP19.48■□□□□ 0.71
SNRPA1-202ENST00000394082 CMASQ8NFW8 434 aaPredicted RBP19.48■□□□□ 0.71
SNRPA1-202ENST00000394082 EIF2AK1Q9BQI3 630 aaKnown RBP19.48■□□□□ 0.71
SNRPA1-202ENST00000394082 XPNPEP1Q9NQW7 623 aa19.48■□□□□ 0.71
SNRPA1-202ENST00000394082 DPP7Q9UHL4 492 aa19.48■□□□□ 0.71
SNRPA1-202ENST00000394082 IPPQ9Y573 584 aa19.48■□□□□ 0.71
SNRPA1-202ENST00000394082 MYO10Q9HD67 2058 aa19.48■□□□□ 0.71
SNRPA1-202ENST00000394082 CACNA1HO95180 2353 aa19.48■□□□□ 0.71
SNRPA1-202ENST00000394082 PAPLNO95428 1278 aa19.47■□□□□ 0.71
SNRPA1-202ENST00000394082 ITGA4P13612 1032 aa19.47■□□□□ 0.71
SNRPA1-202ENST00000394082 KLRC2P26717 231 aa19.47■□□□□ 0.71
SNRPA1-202ENST00000394082 CYP4A11Q02928 519 aa19.47■□□□□ 0.71
SNRPA1-202ENST00000394082 DSC1Q08554 894 aa19.47■□□□□ 0.71
SNRPA1-202ENST00000394082 CTTNQ14247 550 aaKnown RBP19.47■□□□□ 0.71
SNRPA1-202ENST00000394082 OTOP3Q7RTS5 596 aa19.47■□□□□ 0.71
SNRPA1-202ENST00000394082 TPH2Q8IWU9 490 aa19.47■□□□□ 0.71
SNRPA1-202ENST00000394082 COLGALT2Q8IYK4 626 aa19.47■□□□□ 0.71
SNRPA1-202ENST00000394082 ACSF2Q96CM8 615 aaPredicted RBP19.47■□□□□ 0.71
SNRPA1-202ENST00000394082 CSRNP2Q9H175 543 aa19.47■□□□□ 0.71
SNRPA1-202ENST00000394082 DAXXQ9UER7 740 aaPredicted RBP19.47■□□□□ 0.71
SNRPA1-202ENST00000394082 GIT1Q9Y2X7 761 aa19.47■□□□□ 0.71
SNRPA1-202ENST00000394082 ARL5CA6NH57 179 aa19.46■□□□□ 0.71
SNRPA1-202ENST00000394082 ZBTB39O15060 712 aa19.46■□□□□ 0.71
SNRPA1-202ENST00000394082 POMCP01189 267 aa19.46■□□□□ 0.71
SNRPA1-202ENST00000394082 ARL2P36404 184 aa19.46■□□□□ 0.71
SNRPA1-202ENST00000394082 NR5A1Q13285 461 aa19.46■□□□□ 0.71
SNRPA1-202ENST00000394082 ELMSAN1Q6PJG2 1045 aa19.46■□□□□ 0.71
SNRPA1-202ENST00000394082 TMC5Q6UXY8 1006 aa19.46■□□□□ 0.71
SNRPA1-202ENST00000394082 HACE1Q8IYU2 909 aa19.46■□□□□ 0.71
SNRPA1-202ENST00000394082 RPS6KC1Q96S38 1066 aa19.46■□□□□ 0.71
SNRPA1-202ENST00000394082 HERC2P3Q9BVR0 1158 aa19.46■□□□□ 0.71
SNRPA1-202ENST00000394082 MARCH5Q9NX47 278 aa19.46■□□□□ 0.71
SNRPA1-202ENST00000394082 GALR2O43603 387 aaPredicted RBP19.45■□□□□ 0.7
SNRPA1-202ENST00000394082 NR1I2O75469 434 aa19.45■□□□□ 0.7
SNRPA1-202ENST00000394082 URODP06132 367 aa19.45■□□□□ 0.7
SNRPA1-202ENST00000394082 ADH1AP07327 375 aa19.45■□□□□ 0.7
SNRPA1-202ENST00000394082 WEE2P0C1S8 567 aa19.45■□□□□ 0.7
SNRPA1-202ENST00000394082 AK2P54819 239 aa19.45■□□□□ 0.7
SNRPA1-202ENST00000394082 MBTD1Q05BQ5 628 aa19.45■□□□□ 0.7
SNRPA1-202ENST00000394082 CALCRLQ16602 461 aa19.45■□□□□ 0.7
SNRPA1-202ENST00000394082 AMHR2Q16671 573 aa19.45■□□□□ 0.7
SNRPA1-202ENST00000394082 CCDC149Q6ZUS6 474 aa19.45■□□□□ 0.7
SNRPA1-202ENST00000394082 HDAC7Q8WUI4 952 aa19.45■□□□□ 0.7
SNRPA1-202ENST00000394082 GTF3C6Q969F1 213 aa19.45■□□□□ 0.7
SNRPA1-202ENST00000394082 MTMR9Q96QG7 549 aa19.45■□□□□ 0.7
SNRPA1-202ENST00000394082 PHOX2BQ99453 314 aa19.45■□□□□ 0.7
SNRPA1-202ENST00000394082 TTC12Q9H892 705 aaPredicted RBP19.45■□□□□ 0.7
SNRPA1-202ENST00000394082 RXFP1Q9HBX9 757 aa19.45■□□□□ 0.7
SNRPA1-202ENST00000394082 LIMD1Q9UGP4 676 aa19.45■□□□□ 0.7
SNRPA1-202ENST00000394082 INO80B-WBP1J3KQ70 363 aa19.44■□□□□ 0.7
SNRPA1-202ENST00000394082 EIF5BO60841 1220 aaKnown RBP19.44■□□□□ 0.7
SNRPA1-202ENST00000394082 PDGFBP01127 241 aaPredicted RBP19.44■□□□□ 0.7
SNRPA1-202ENST00000394082 RARRES1P49788 294 aa19.44■□□□□ 0.7
SNRPA1-202ENST00000394082 CLCN5P51795 746 aa19.44■□□□□ 0.7
SNRPA1-202ENST00000394082 KIAA0319Q5VV43 1072 aa19.44■□□□□ 0.7
SNRPA1-202ENST00000394082 KANK3Q6NY19 840 aa19.44■□□□□ 0.7
SNRPA1-202ENST00000394082 GAD1Q99259 594 aa19.44■□□□□ 0.7
SNRPA1-202ENST00000394082 EIF2AQ9BY44 585 aaKnown RBP19.44■□□□□ 0.7
SNRPA1-202ENST00000394082 CHST7Q9NS84 486 aa19.44■□□□□ 0.7
SNRPA1-202ENST00000394082 BMP2KQ9NSY1 1161 aaPredicted RBP19.44■□□□□ 0.7
SNRPA1-202ENST00000394082 A0A1B0GUA9 196 aa19.43■□□□□ 0.7
SNRPA1-202ENST00000394082 FAM205CA6NFA0 338 aa19.43■□□□□ 0.7
SNRPA1-202ENST00000394082 PROB1E7EW31 1015 aa19.43■□□□□ 0.7
SNRPA1-202ENST00000394082 ST18O60284 1047 aa19.43■□□□□ 0.7
SNRPA1-202ENST00000394082 NEMFO60524 1076 aa19.43■□□□□ 0.7
SNRPA1-202ENST00000394082 ARF4P18085 180 aaPredicted RBP19.43■□□□□ 0.7
SNRPA1-202ENST00000394082 MLH1P40692 756 aa19.43■□□□□ 0.7
SNRPA1-202ENST00000394082 GLUD2P49448 558 aa19.43■□□□□ 0.7
SNRPA1-202ENST00000394082 DSG1Q02413 1049 aa19.43■□□□□ 0.7
SNRPA1-202ENST00000394082 CAPSQ13938 189 aa19.43■□□□□ 0.7
SNRPA1-202ENST00000394082 ME3Q16798 604 aa19.43■□□□□ 0.7
SNRPA1-202ENST00000394082 RNF39Q9H2S5 420 aa19.43■□□□□ 0.7
SNRPA1-202ENST00000394082 MYO15AQ9UKN7 3530 aa19.43■□□□□ 0.7
SNRPA1-202ENST00000394082 TEX28O15482 410 aa19.42■□□□□ 0.7
SNRPA1-202ENST00000394082 ASGR2P07307 311 aa19.42■□□□□ 0.7
SNRPA1-202ENST00000394082 GLRA2P23416 452 aa19.42■□□□□ 0.7
SNRPA1-202ENST00000394082 OR1G1P47890 313 aa19.42■□□□□ 0.7
SNRPA1-202ENST00000394082 ASTLQ6HA08 431 aaPredicted RBP19.42■□□□□ 0.7
SNRPA1-202ENST00000394082 SLC27A1Q6PCB7 646 aa19.42■□□□□ 0.7
SNRPA1-202ENST00000394082 NSUN7Q8NE18 718 aaKnown RBP19.42■□□□□ 0.7
SNRPA1-202ENST00000394082 GSTCDQ8NEC7 633 aa19.42■□□□□ 0.7
SNRPA1-202ENST00000394082 ASAP3Q8TDY4 903 aa19.42■□□□□ 0.7
SNRPA1-202ENST00000394082 PRIMPOLQ96LW4 560 aa19.42■□□□□ 0.7
SNRPA1-202ENST00000394082 COLEC11Q9BWP8 271 aa19.42■□□□□ 0.7
SNRPA1-202ENST00000394082 TRIM6Q9C030 488 aaPredicted RBP19.42■□□□□ 0.7
SNRPA1-202ENST00000394082 PLEKHA4Q9H4M7 779 aa19.42■□□□□ 0.7
SNRPA1-202ENST00000394082 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.42■□□□□ 0.7
SNRPA1-202ENST00000394082 IGSF9Q9P2J2 1179 aa19.42■□□□□ 0.7
SNRPA1-202ENST00000394082 CFAP54Q96N23 3096 aa19.41■□□□□ 0.7
SNRPA1-202ENST00000394082 SPDYE4A6NLX3 237 aa19.41■□□□□ 0.7
SNRPA1-202ENST00000394082 BTBD18B2RXH4 712 aa19.41■□□□□ 0.7
SNRPA1-202ENST00000394082 GLUD1P00367 558 aa19.41■□□□□ 0.7
SNRPA1-202ENST00000394082 SSBP05455 408 aaKnown RBP eCLIP19.41■□□□□ 0.7
SNRPA1-202ENST00000394082 SCNN1GP51170 649 aa19.41■□□□□ 0.7
SNRPA1-202ENST00000394082 TDGQ13569 410 aa19.41■□□□□ 0.7
SNRPA1-202ENST00000394082 PPP4R3CPQ6ZMV5 832 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms