RNA–Protein interactions for RNA: ENST00000393301.4

CTSC-202, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 598 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-202ENST00000393301 PLXNA3P51805 1871 aa13.74□□□□□ -0.21
CTSC-202ENST00000393301 TSPAN1O60635 241 aa13.74□□□□□ -0.21
CTSC-202ENST00000393301 SOD2P04179 222 aa13.74□□□□□ -0.21
CTSC-202ENST00000393301 RARRES1P49788 294 aa13.74□□□□□ -0.21
CTSC-202ENST00000393301 MBTD1Q05BQ5 628 aa13.74□□□□□ -0.21
CTSC-202ENST00000393301 CTTNQ14247 550 aaKnown RBP13.74□□□□□ -0.21
CTSC-202ENST00000393301 XKR9Q5GH70 373 aa13.74□□□□□ -0.21
CTSC-202ENST00000393301 NOTUMQ6P988 496 aa13.74□□□□□ -0.21
CTSC-202ENST00000393301 CYP26C1Q6V0L0 522 aa13.74□□□□□ -0.21
CTSC-202ENST00000393301 COLGALT2Q8IYK4 626 aa13.74□□□□□ -0.21
CTSC-202ENST00000393301 PRSS33Q8NF86 280 aa13.74□□□□□ -0.21
CTSC-202ENST00000393301 CMASQ8NFW8 434 aaPredicted RBP13.74□□□□□ -0.21
CTSC-202ENST00000393301 PBXIP1Q96AQ6 731 aa13.74□□□□□ -0.21
CTSC-202ENST00000393301 HERC2P3Q9BVR0 1158 aa13.74□□□□□ -0.21
CTSC-202ENST00000393301 CSRNP2Q9H175 543 aa13.74□□□□□ -0.21
CTSC-202ENST00000393301 MARCH5Q9NX47 278 aa13.74□□□□□ -0.21
CTSC-202ENST00000393301 SORCS3Q9UPU3 1222 aa13.74□□□□□ -0.21
CTSC-202ENST00000393301 RIF1Q5UIP0 2472 aaKnown RBP13.74□□□□□ -0.21
CTSC-202ENST00000393301 VPS13AQ96RL7 3174 aa13.73□□□□□ -0.21
CTSC-202ENST00000393301 C2CD4DB7Z1M9 353 aa13.73□□□□□ -0.21
CTSC-202ENST00000393301 K7ELQ4 463 aaPredicted RBP13.73□□□□□ -0.21
CTSC-202ENST00000393301 WNT7AO00755 349 aa13.73□□□□□ -0.21
CTSC-202ENST00000393301 ZBTB39O15060 712 aa13.73□□□□□ -0.21
CTSC-202ENST00000393301 NEMFO60524 1076 aa13.73□□□□□ -0.21
CTSC-202ENST00000393301 SRGAP2CP0DJJ0 459 aa13.73□□□□□ -0.21
CTSC-202ENST00000393301 CLCN4P51793 760 aa13.73□□□□□ -0.21
CTSC-202ENST00000393301 AFF1P51825 1210 aaKnown RBP13.73□□□□□ -0.21
CTSC-202ENST00000393301 PTPN5P54829 565 aa13.73□□□□□ -0.21
CTSC-202ENST00000393301 CYP4A11Q02928 519 aa13.73□□□□□ -0.21
CTSC-202ENST00000393301 RNASELQ05823 741 aaKnown RBP13.73□□□□□ -0.21
CTSC-202ENST00000393301 CAPSQ13938 189 aa13.73□□□□□ -0.21
CTSC-202ENST00000393301 TFDP1Q14186 410 aa13.73□□□□□ -0.21
CTSC-202ENST00000393301 CALCRLQ16602 461 aa13.73□□□□□ -0.21
CTSC-202ENST00000393301 PPP4R3CPQ6ZMV5 832 aa13.73□□□□□ -0.21
CTSC-202ENST00000393301 C15orf39Q6ZRI6 1047 aa13.73□□□□□ -0.21
CTSC-202ENST00000393301 GPR149Q86SP6 731 aa13.73□□□□□ -0.21
CTSC-202ENST00000393301 SUGP1Q8IWZ8 645 aaKnown RBP13.73□□□□□ -0.21
CTSC-202ENST00000393301 DIS3L2Q8IYB7 885 aaKnown RBP13.73□□□□□ -0.21
CTSC-202ENST00000393301 PLCD3Q8N3E9 789 aa13.73□□□□□ -0.21
CTSC-202ENST00000393301 NECAB1Q8N987 351 aa13.73□□□□□ -0.21
CTSC-202ENST00000393301 FBXO18Q8NFZ0 1043 aa13.73□□□□□ -0.21
CTSC-202ENST00000393301 TTC12Q9H892 705 aaPredicted RBP13.73□□□□□ -0.21
CTSC-202ENST00000393301 SFXN1Q9H9B4 322 aa13.73□□□□□ -0.21
CTSC-202ENST00000393301 RXFP1Q9HBX9 757 aa13.73□□□□□ -0.21
CTSC-202ENST00000393301 SSX2IPQ9Y2D8 614 aa13.73□□□□□ -0.21
CTSC-202ENST00000393301 INPP5FQ9Y2H2 1132 aa13.73□□□□□ -0.21
CTSC-202ENST00000393301 GIT1Q9Y2X7 761 aa13.73□□□□□ -0.21
CTSC-202ENST00000393301 IPPQ9Y573 584 aa13.73□□□□□ -0.21
CTSC-202ENST00000393301 FAM186AA6NE01 2351 aa13.72□□□□□ -0.21
CTSC-202ENST00000393301 CFAP54Q96N23 3096 aa13.72□□□□□ -0.21
CTSC-202ENST00000393301 BTBD18B2RXH4 712 aa13.72□□□□□ -0.21
CTSC-202ENST00000393301 NRP1O14786 923 aa13.72□□□□□ -0.21
CTSC-202ENST00000393301 ERLIN2O94905 339 aa13.72□□□□□ -0.21
CTSC-202ENST00000393301 ALDH2P05091 517 aa13.72□□□□□ -0.21
CTSC-202ENST00000393301 EPCAMP16422 314 aa13.72□□□□□ -0.21
CTSC-202ENST00000393301 MUTP22033 750 aa13.72□□□□□ -0.21
CTSC-202ENST00000393301 GLRA2P23416 452 aa13.72□□□□□ -0.21
CTSC-202ENST00000393301 TCF15Q12870 199 aa13.72□□□□□ -0.21
CTSC-202ENST00000393301 FAM187BQ17R55 369 aa13.72□□□□□ -0.21
CTSC-202ENST00000393301 ATAT1Q5SQI0 421 aa13.72□□□□□ -0.21
CTSC-202ENST00000393301 CDCA2Q69YH5 1023 aaPredicted RBP13.72□□□□□ -0.21
CTSC-202ENST00000393301 ASAP3Q8TDY4 903 aa13.72□□□□□ -0.21
CTSC-202ENST00000393301 HDAC7Q8WUI4 952 aa13.72□□□□□ -0.21
CTSC-202ENST00000393301 PRIMPOLQ96LW4 560 aa13.72□□□□□ -0.21
CTSC-202ENST00000393301 KLHL5Q96PQ7 755 aa13.72□□□□□ -0.21
CTSC-202ENST00000393301 EMILIN2Q9BXX0 1053 aa13.72□□□□□ -0.21
CTSC-202ENST00000393301 TUFT1Q9NNX1 390 aa13.72□□□□□ -0.21
CTSC-202ENST00000393301 CDH22Q9UJ99 828 aa13.72□□□□□ -0.21
CTSC-202ENST00000393301 DBR1Q9UK59 544 aaKnown RBP13.72□□□□□ -0.21
CTSC-202ENST00000393301 FAN1Q9Y2M0 1017 aa13.72□□□□□ -0.21
CTSC-202ENST00000393301 ZFHX2Q9C0A1 2572 aaPredicted RBP13.72□□□□□ -0.21
CTSC-202ENST00000393301 A0A1B0GUA9 196 aa13.71□□□□□ -0.21
CTSC-202ENST00000393301 ARL5CA6NH57 179 aa13.71□□□□□ -0.21
CTSC-202ENST00000393301 MARCH6O60337 910 aa13.71□□□□□ -0.21
CTSC-202ENST00000393301 CNPP09543 421 aaKnown RBP13.71□□□□□ -0.21
CTSC-202ENST00000393301 SPATA31C1P0DKV0 1188 aa13.71□□□□□ -0.21
CTSC-202ENST00000393301 ITGA4P13612 1032 aa13.71□□□□□ -0.21
CTSC-202ENST00000393301 ARF4P18085 180 aaPredicted RBP13.71□□□□□ -0.21
CTSC-202ENST00000393301 MRE11P49959 708 aa13.71□□□□□ -0.21
CTSC-202ENST00000393301 MTMR3Q13615 1198 aa13.71□□□□□ -0.21
CTSC-202ENST00000393301 ALYREFQ86V81 257 aaKnown RBP13.71□□□□□ -0.21
CTSC-202ENST00000393301 CCDC83Q8IWF9 413 aa13.71□□□□□ -0.21
CTSC-202ENST00000393301 TPH2Q8IWU9 490 aa13.71□□□□□ -0.21
CTSC-202ENST00000393301 TDRD5Q8NAT2 981 aaKnown RBP13.71□□□□□ -0.21
CTSC-202ENST00000393301 KREMEN2Q8NCW0 462 aa13.71□□□□□ -0.21
CTSC-202ENST00000393301 GSTCDQ8NEC7 633 aa13.71□□□□□ -0.21
CTSC-202ENST00000393301 AUTS2Q8WXX7 1259 aa13.71□□□□□ -0.21
CTSC-202ENST00000393301 RPS6KC1Q96S38 1066 aa13.71□□□□□ -0.21
CTSC-202ENST00000393301 POLR3CQ9BUI4 534 aaPredicted RBP13.71□□□□□ -0.21
CTSC-202ENST00000393301 EIF2AQ9BY44 585 aaKnown RBP13.71□□□□□ -0.21
CTSC-202ENST00000393301 FOXP1Q9H334 677 aaPredicted RBP13.71□□□□□ -0.21
CTSC-202ENST00000393301 CHST7Q9NS84 486 aa13.71□□□□□ -0.21
CTSC-202ENST00000393301 JAK2O60674 1132 aa13.7□□□□□ -0.22
CTSC-202ENST00000393301 BRD1O95696 1058 aa13.7□□□□□ -0.22
CTSC-202ENST00000393301 PDCP20941 246 aa13.7□□□□□ -0.22
CTSC-202ENST00000393301 AVPR2P30518 371 aa13.7□□□□□ -0.22
CTSC-202ENST00000393301 DSG1Q02413 1049 aa13.7□□□□□ -0.22
CTSC-202ENST00000393301 NCBP1Q09161 790 aaKnown RBP13.7□□□□□ -0.22
CTSC-202ENST00000393301 LONRF3Q496Y0 759 aa13.7□□□□□ -0.22
CTSC-202ENST00000393301 RARS2Q5T160 578 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms