RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 TFDP1Q14186 410 aa18.42■□□□□ 0.54
PTPRK-208ENST00000392449 SAFBQ15424 915 aaKnown RBP eCLIP18.42■□□□□ 0.54
PTPRK-208ENST00000392449 NOTUMQ6P988 496 aa18.42■□□□□ 0.54
PTPRK-208ENST00000392449 IFNLR1Q8IU57 520 aaPredicted RBP18.42■□□□□ 0.54
PTPRK-208ENST00000392449 RSPH1Q8WYR4 309 aa18.42■□□□□ 0.54
PTPRK-208ENST00000392449 FAM193BQ96PV7 902 aaPredicted RBP18.42■□□□□ 0.54
PTPRK-208ENST00000392449 CSRNP2Q9H175 543 aa18.42■□□□□ 0.54
PTPRK-208ENST00000392449 MARCH5Q9NX47 278 aa18.42■□□□□ 0.54
PTPRK-208ENST00000392449 ARIH1Q9Y4X5 557 aaPredicted RBP18.42■□□□□ 0.54
PTPRK-208ENST00000392449 TMEM221A6NGB7 291 aa18.41■□□□□ 0.54
PTPRK-208ENST00000392449 M0R296 226 aa18.41■□□□□ 0.54
PTPRK-208ENST00000392449 C2CD2LO14523 706 aa18.41■□□□□ 0.54
PTPRK-208ENST00000392449 AKAP5P24588 427 aa18.41■□□□□ 0.54
PTPRK-208ENST00000392449 TPRNQ4KMQ1 711 aa18.41■□□□□ 0.54
PTPRK-208ENST00000392449 TRIM67Q6ZTA4 783 aa18.41■□□□□ 0.54
PTPRK-208ENST00000392449 TAS1R1Q7RTX1 841 aa18.41■□□□□ 0.54
PTPRK-208ENST00000392449 TMEM87AQ8NBN3 555 aa18.41■□□□□ 0.54
PTPRK-208ENST00000392449 SLC22A17Q8WUG5 538 aa18.41■□□□□ 0.54
PTPRK-208ENST00000392449 ADAM7Q9H2U9 754 aa18.41■□□□□ 0.54
PTPRK-208ENST00000392449 FAN1Q9Y2M0 1017 aa18.41■□□□□ 0.54
PTPRK-208ENST00000392449 IRAK3Q9Y616 596 aa18.41■□□□□ 0.54
PTPRK-208ENST00000392449 LRRIQ4A6NIV6 560 aa18.4■□□□□ 0.54
PTPRK-208ENST00000392449 TTLL13PA6NNM8 815 aa18.4■□□□□ 0.54
PTPRK-208ENST00000392449 ABCB7O75027 752 aa18.4■□□□□ 0.54
PTPRK-208ENST00000392449 NPTXRO95502 500 aa18.4■□□□□ 0.54
PTPRK-208ENST00000392449 OR1G1P47890 313 aa18.4■□□□□ 0.54
PTPRK-208ENST00000392449 BMS1Q14692 1282 aaKnown RBP18.4■□□□□ 0.54
PTPRK-208ENST00000392449 C8orf34Q49A92 452 aa18.4■□□□□ 0.54
PTPRK-208ENST00000392449 COLGALT2Q8IYK4 626 aa18.4■□□□□ 0.54
PTPRK-208ENST00000392449 BSNDQ8WZ55 320 aa18.4■□□□□ 0.54
PTPRK-208ENST00000392449 RABGGTAQ92696 567 aa18.4■□□□□ 0.54
PTPRK-208ENST00000392449 POLD4Q9HCU8 107 aa18.4■□□□□ 0.54
PTPRK-208ENST00000392449 KLK14Q9P0G3 267 aa18.4■□□□□ 0.54
PTPRK-208ENST00000392449 CACNG4Q9UBN1 327 aa18.4■□□□□ 0.54
PTPRK-208ENST00000392449 USP20Q9Y2K6 914 aa18.4■□□□□ 0.54
PTPRK-208ENST00000392449 C2CD4DB7Z1M9 353 aa18.39■□□□□ 0.54
PTPRK-208ENST00000392449 ALDH2P05091 517 aa18.39■□□□□ 0.54
PTPRK-208ENST00000392449 CNPP09543 421 aaKnown RBP18.39■□□□□ 0.54
PTPRK-208ENST00000392449 OR52Z1P0C646 297 aa18.39■□□□□ 0.54
PTPRK-208ENST00000392449 MYBP10242 640 aa18.39■□□□□ 0.54
PTPRK-208ENST00000392449 AXLP30530 894 aa18.39■□□□□ 0.54
PTPRK-208ENST00000392449 POU5F1BQ06416 359 aa18.39■□□□□ 0.54
PTPRK-208ENST00000392449 TTC38Q5R3I4 469 aa18.39■□□□□ 0.54
PTPRK-208ENST00000392449 CES5AQ6NT32 575 aa18.39■□□□□ 0.54
PTPRK-208ENST00000392449 TMC5Q6UXY8 1006 aa18.39■□□□□ 0.54
PTPRK-208ENST00000392449 FBXO18Q8NFZ0 1043 aa18.39■□□□□ 0.54
PTPRK-208ENST00000392449 FBXL18Q96ME1 805 aa18.39■□□□□ 0.54
PTPRK-208ENST00000392449 KLHL5Q96PQ7 755 aa18.39■□□□□ 0.54
PTPRK-208ENST00000392449 LLPHQ9BRT6 129 aaKnown RBP18.39■□□□□ 0.54
PTPRK-208ENST00000392449 TMEM175Q9BSA9 504 aa18.39■□□□□ 0.54
PTPRK-208ENST00000392449 TRIM6Q9C030 488 aaPredicted RBP18.39■□□□□ 0.54
PTPRK-208ENST00000392449 TUFT1Q9NNX1 390 aa18.39■□□□□ 0.54
PTPRK-208ENST00000392449 KANSL3Q9P2N6 904 aa18.39■□□□□ 0.54
PTPRK-208ENST00000392449 PLXNA3P51805 1871 aa18.39■□□□□ 0.53
PTPRK-208ENST00000392449 C2orf16Q68DN1 1984 aa18.39■□□□□ 0.53
PTPRK-208ENST00000392449 EIF5BO60841 1220 aaKnown RBP18.39■□□□□ 0.53
PTPRK-208ENST00000392449 ITIH3Q06033 890 aa18.39■□□□□ 0.53
PTPRK-208ENST00000392449 DSC1Q08554 894 aa18.39■□□□□ 0.53
PTPRK-208ENST00000392449 ECM1Q16610 540 aa18.39■□□□□ 0.53
PTPRK-208ENST00000392449 PTPN21Q16825 1174 aa18.39■□□□□ 0.53
PTPRK-208ENST00000392449 CNNM3Q8NE01 707 aa18.39■□□□□ 0.53
PTPRK-208ENST00000392449 GSTCDQ8NEC7 633 aa18.39■□□□□ 0.53
PTPRK-208ENST00000392449 CCDC51Q96ER9 411 aa18.39■□□□□ 0.53
PTPRK-208ENST00000392449 B3GALT6Q96L58 329 aa18.39■□□□□ 0.53
PTPRK-208ENST00000392449 NFKBIZQ9BYH8 718 aa18.39■□□□□ 0.53
PTPRK-208ENST00000392449 FOXP1Q9H334 677 aaPredicted RBP18.39■□□□□ 0.53
PTPRK-208ENST00000392449 SMOC2Q9H3U7 446 aa18.39■□□□□ 0.53
PTPRK-208ENST00000392449 LILRB3O75022 631 aa18.38■□□□□ 0.53
PTPRK-208ENST00000392449 GNL2Q13823 731 aaKnown RBP18.38■□□□□ 0.53
PTPRK-208ENST00000392449 GIT2Q14161 759 aa18.38■□□□□ 0.53
PTPRK-208ENST00000392449 PCBP1Q15365 356 aaKnown RBP eCLIP18.38■□□□□ 0.53
PTPRK-208ENST00000392449 CABP7Q86V35 215 aa18.38■□□□□ 0.53
PTPRK-208ENST00000392449 NOSTRINQ8IVI9 506 aa18.38■□□□□ 0.53
PTPRK-208ENST00000392449 PBXIP1Q96AQ6 731 aa18.38■□□□□ 0.53
PTPRK-208ENST00000392449 POLR3CQ9BUI4 534 aaPredicted RBP18.38■□□□□ 0.53
PTPRK-208ENST00000392449 UBN1Q9NPG3 1134 aa18.38■□□□□ 0.53
PTPRK-208ENST00000392449 DBR1Q9UK59 544 aaKnown RBP18.38■□□□□ 0.53
PTPRK-208ENST00000392449 DENND4AQ7Z401 1863 aa18.37■□□□□ 0.53
PTPRK-208ENST00000392449 MYO10Q9HD67 2058 aa18.37■□□□□ 0.53
PTPRK-208ENST00000392449 INPPL1O15357 1258 aa18.37■□□□□ 0.53
PTPRK-208ENST00000392449 EDN1P05305 212 aa18.37■□□□□ 0.53
PTPRK-208ENST00000392449 XRCC6P12956 609 aaKnown RBP eCLIP18.37■□□□□ 0.53
PTPRK-208ENST00000392449 LIG1P18858 919 aa18.37■□□□□ 0.53
PTPRK-208ENST00000392449 KLRC2P26717 231 aa18.37■□□□□ 0.53
PTPRK-208ENST00000392449 CLCN4P51793 760 aa18.37■□□□□ 0.53
PTPRK-208ENST00000392449 NCBP1Q09161 790 aaKnown RBP18.37■□□□□ 0.53
PTPRK-208ENST00000392449 IER5LQ5T953 404 aa18.37■□□□□ 0.53
PTPRK-208ENST00000392449 SLC27A1Q6PCB7 646 aa18.37■□□□□ 0.53
PTPRK-208ENST00000392449 PADI6Q6TGC4 694 aa18.37■□□□□ 0.53
PTPRK-208ENST00000392449 ZBTB33Q86T24 672 aa18.37■□□□□ 0.53
PTPRK-208ENST00000392449 C4orf32Q8N8J7 132 aa18.37■□□□□ 0.53
PTPRK-208ENST00000392449 FAM184AQ8NB25 1140 aa18.37■□□□□ 0.53
PTPRK-208ENST00000392449 ASIC4Q96FT7 647 aa18.37■□□□□ 0.53
PTPRK-208ENST00000392449 MFSD14AQ96MC6 490 aa18.37■□□□□ 0.53
PTPRK-208ENST00000392449 NACC1Q96RE7 527 aa18.37■□□□□ 0.53
PTPRK-208ENST00000392449 KIFC3Q9BVG8 833 aa18.37■□□□□ 0.53
PTPRK-208ENST00000392449 CXCL16Q9H2A7 254 aa18.37■□□□□ 0.53
PTPRK-208ENST00000392449 MRPL17Q9NRX2 175 aaKnown RBP18.37■□□□□ 0.53
PTPRK-208ENST00000392449 DZANK1Q9NVP4 752 aa18.37■□□□□ 0.53
PTPRK-208ENST00000392449 PARP2Q9UGN5 583 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms